Clone AT25132 Report

Search the DGRC for AT25132

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:251
Well:32
Vector:pOTB7
Associated Gene/TranscriptCG32219-RA
Protein status:AT25132.pep: gold
Sequenced Size:1466

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8004 2002-01-01 Sim4 clustering to Release 2
CG32219 2002-05-17 Blastp of sequenced clone
CG32219 2003-01-01 Sim4 clustering to Release 3
CG32219 2008-04-29 Release 5.5 accounting
CG32219 2008-08-15 Release 5.9 accounting
CG32219 2008-12-18 5.12 accounting

Clone Sequence Records

AT25132.complete Sequence

1466 bp (1466 high quality bases) assembled on 2002-05-17

GenBank Submission: AY118711

> AT25132.complete
GTTCACAATGACAAAGCTCTCAAAATATTAAGTACACTTTCCTTTAAAAT
CGCTTTTATAAGAATGCTAATACAGGTTTTAGTGTTTTTTTTACTTTATC
GAAATACTTACGAAGATTGTAATCATAATCATTCGGCTGTCGAAGATCAT
TACGATTGTGGATGTTGTCCGGGCATAAGTAACAACAATGGCCAGGTGGT
TGGGTTCCATTGCCATAAAGATGACCAAAACTCAATTTTAAGATTTGCAT
CGGATGAGGAAAGTGCGTTTGCTGAATGTGTGCCAAACTGTTTTGAGATA
AAATATCCCATTCAGGAATACTGCTGTTTCTGGTCACCGAAGCTGGGCTG
TACGATACTAGTCAATGAAAAGTATTTCAGCAATAAAGACTTGTGCAATA
ACTGCAAGTATTTTTGCCAAAGAACTACAGGAGATGGGAGGAGCTCTAGT
TATCCACAGAAACTTATCTTGCTACTCTCATTACTGCTGATCGGTTGCAA
TTACTTTCAGAACTAAAGTTCATAATTGACCTGCTTCTTCAATAAAGAGA
GTTACTTTGCATTAATCCTAGGACCTACTCAACCCCCGTCAAAAGACCCG
GATGAGTTAATCAAAAATTAATAGTGAAAGTAACTCTTTGGTCATCATTA
TCATAGTTATCATTATGAACTGTGCCCAGGCCGGGGTAAATTTAATTAAA
ACAACAAACGCGCGATGTTCCAAAGAAAGCAGCCGTCGCTGGAAATTGTA
CGTGGAAACGGAAGTGGAAATGGGGAGACCCCGATGTTATCGTGACAAGC
CCAAATTAAGTAGCGCACGGGGTTACATCAGCCAGCCAGGGAACAAAACC
GGCGGGTTGGGCACTCAATTTAAAGACCAAACCAAGGCAACCAGCGAATA
TGGCCATGAGTTGGCCAGAAGATGAATGGCAACCGAGCCGGAGGCTCATT
TCATAGACCAACACCCAAAACGAAAATTTAAATACATTCTACACCCGGGA
TTAAGGAGGATTTTCACACTCACCCGTGGTTCCATTTTCCTGCTCGCTCA
AATCGGCCAAAGATGCCGAAAGGGCGTCATTCATCCTGGCCGCCGATGAC
GTCATCGCCTTCGGCTGCGTTGCATTTCCGTCGGCCTTAACAATCAGATT
CGCTGTTGCATTTGTGCCATTGCCCGTTTTCGCAGTTTCCGCATTGTGAT
TTACCATGGCGAAAAGCGGTGGCGTGTAGCTAGTGGCACTCCTCACAGCC
GCCAGCTGCGCGTCCTGATTGCCTCACCCTGGACGCAAGTCCTTGCGACT
TCTGCTCCTGGGGATCCAACACTTGTTGCCGACTTCCTTCCTTCCTCCCG
GAAATGGAGAAATCCAACTGAAGCGAAACGGAAACGGGAGTAATGGTTTA
GTTCGAGAGCTCTTGTCAATAAATAATTGCAATTTCGCTTGTGGCATAAA
AAAAAAAAAAAAAAAA

AT25132.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG32219-RA 1447 CG32219-RA 1..1447 1..1447 7220 99.9 Plus
Ac76E.c 4035 Ac76E.c 256..606 1369..1019 1740 99.7 Minus
Ac76E.b 5152 Ac76E.b 256..606 1369..1019 1740 99.7 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:58:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19939324..19940017 998..305 3425 99.6 Minus
chr3L 24539361 chr3L 19938484..19938934 1447..997 2255 100 Minus
chr3L 24539361 chr3L 19940068..19940238 304..134 855 100 Minus
chr3L 24539361 chr3L 19940305..19940437 133..1 665 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:58:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:58:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19950022..19950715 998..305 3455 99.9 Minus
3L 28110227 3L 19949181..19949632 1448..997 2260 100 Minus
3L 28110227 3L 19950766..19950936 304..134 855 100 Minus
3L 28110227 3L 19951003..19951135 133..1 665 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19943122..19943815 998..305 3455 99.8 Minus
3L 28103327 3L 19942281..19942732 1448..997 2260 100 Minus
3L 28103327 3L 19943866..19944036 304..134 855 100 Minus
3L 28103327 3L 19944103..19944235 133..1 665 100 Minus
Blast to na_te.dros performed 2019-03-16 04:58:10
Subject Length Description Subject Range Query Range Score Percent Strand
Porto1 4682 Porto1 DOC5 4682bp 842..959 1226..1113 112 60 Minus

AT25132.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:59:08 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19938484..19938933 998..1447 100 <- Minus
chr3L 19939325..19940017 305..997 99 <- Minus
chr3L 19940068..19940238 134..304 100 <- Minus
chr3L 19940305..19940437 1..133 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:21:00 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..453 64..516 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:49:40 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..453 64..516 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:47:12 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..453 64..516 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:42:16 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..453 64..516 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:55:47 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..453 64..516 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:26:44 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..1447 1..1447 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:49:40 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..997 1..997 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:47:12 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..997 1..997 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:42:17 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..1447 1..1447 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:55:47 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
CG32219-RA 1..997 1..997 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:59:08 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19949182..19949631 998..1447 100 <- Minus
3L 19950023..19950715 305..997 99 <- Minus
3L 19950766..19950936 134..304 100 <- Minus
3L 19951003..19951135 1..133 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:59:08 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19949182..19949631 998..1447 100 <- Minus
3L 19950023..19950715 305..997 99 <- Minus
3L 19950766..19950936 134..304 100 <- Minus
3L 19951003..19951135 1..133 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:59:08 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19949182..19949631 998..1447 100 <- Minus
3L 19950023..19950715 305..997 99 <- Minus
3L 19950766..19950936 134..304 100 <- Minus
3L 19951003..19951135 1..133 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:47:12 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19942282..19942731 998..1447 100 <- Minus
arm_3L 19943123..19943815 305..997 99 <- Minus
arm_3L 19943866..19944036 134..304 100 <- Minus
arm_3L 19944103..19944235 1..133 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:14:34 Download gff for AT25132.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19942282..19942731 998..1447 100 <- Minus
3L 19943123..19943815 305..997 99 <- Minus
3L 19943866..19944036 134..304 100 <- Minus
3L 19944103..19944235 1..133 100   Minus

AT25132.hyp Sequence

Translation from 1 to 515

> AT25132.hyp
VHNDKALKILSTLSFKIAFIRMLIQVLVFFLLYRNTYEDCNHNHSAVEDH
YDCGCCPGISNNNGQVVGFHCHKDDQNSILRFASDEESAFAECVPNCFEI
KYPIQEYCCFWSPKLGCTILVNEKYFSNKDLCNNCKYFCQRTTGDGRSSS
YPQKLILLLSLLLIGCNYFQN*

AT25132.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG32219-PA 150 CG32219-PA 1..150 22..171 850 100 Plus
CG34258-PA 165 CG34258-PA 59..164 69..164 177 34.9 Plus
CG33710-PA 162 CG33710-PA 4..131 6..139 169 30.9 Plus

AT25132.pep Sequence

Translation from 63 to 515

> AT25132.pep
MLIQVLVFFLLYRNTYEDCNHNHSAVEDHYDCGCCPGISNNNGQVVGFHC
HKDDQNSILRFASDEESAFAECVPNCFEIKYPIQEYCCFWSPKLGCTILV
NEKYFSNKDLCNNCKYFCQRTTGDGRSSSYPQKLILLLSLLLIGCNYFQN
*

AT25132.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:55:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13359-PA 151 GG13359-PA 1..151 1..150 579 72.2 Plus
Dere\GG13357-PA 164 GG13357-PA 29..132 13..120 143 31.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG32219-PA 150 CG32219-PA 1..150 1..150 850 100 Plus
CG34258-PA 165 CG34258-PA 59..164 48..143 177 34.9 Plus
CG33710-PA 162 CG33710-PA 45..131 32..118 168 35.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:55:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15297-PA 150 GM15297-PA 1..150 1..150 689 92 Plus
Dsec\GM15191-PA 163 GM15191-PA 30..162 13..143 149 28.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17217-PA 147 GD17217-PA 1..147 1..147 666 90.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:55:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22452-PA 149 GE22452-PA 1..149 1..148 558 69.8 Plus
Dyak\GE22761-PA 149 GE22761-PA 12..149 12..148 515 69.6 Plus
Dyak\GE22760-PA 164 GE22760-PA 22..163 6..143 157 29.3 Plus
Dyak\GE22451-PA 164 GE22451-PA 22..163 6..143 157 29.3 Plus