AT25132.complete Sequence
1466 bp (1466 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118711
> AT25132.complete
GTTCACAATGACAAAGCTCTCAAAATATTAAGTACACTTTCCTTTAAAAT
CGCTTTTATAAGAATGCTAATACAGGTTTTAGTGTTTTTTTTACTTTATC
GAAATACTTACGAAGATTGTAATCATAATCATTCGGCTGTCGAAGATCAT
TACGATTGTGGATGTTGTCCGGGCATAAGTAACAACAATGGCCAGGTGGT
TGGGTTCCATTGCCATAAAGATGACCAAAACTCAATTTTAAGATTTGCAT
CGGATGAGGAAAGTGCGTTTGCTGAATGTGTGCCAAACTGTTTTGAGATA
AAATATCCCATTCAGGAATACTGCTGTTTCTGGTCACCGAAGCTGGGCTG
TACGATACTAGTCAATGAAAAGTATTTCAGCAATAAAGACTTGTGCAATA
ACTGCAAGTATTTTTGCCAAAGAACTACAGGAGATGGGAGGAGCTCTAGT
TATCCACAGAAACTTATCTTGCTACTCTCATTACTGCTGATCGGTTGCAA
TTACTTTCAGAACTAAAGTTCATAATTGACCTGCTTCTTCAATAAAGAGA
GTTACTTTGCATTAATCCTAGGACCTACTCAACCCCCGTCAAAAGACCCG
GATGAGTTAATCAAAAATTAATAGTGAAAGTAACTCTTTGGTCATCATTA
TCATAGTTATCATTATGAACTGTGCCCAGGCCGGGGTAAATTTAATTAAA
ACAACAAACGCGCGATGTTCCAAAGAAAGCAGCCGTCGCTGGAAATTGTA
CGTGGAAACGGAAGTGGAAATGGGGAGACCCCGATGTTATCGTGACAAGC
CCAAATTAAGTAGCGCACGGGGTTACATCAGCCAGCCAGGGAACAAAACC
GGCGGGTTGGGCACTCAATTTAAAGACCAAACCAAGGCAACCAGCGAATA
TGGCCATGAGTTGGCCAGAAGATGAATGGCAACCGAGCCGGAGGCTCATT
TCATAGACCAACACCCAAAACGAAAATTTAAATACATTCTACACCCGGGA
TTAAGGAGGATTTTCACACTCACCCGTGGTTCCATTTTCCTGCTCGCTCA
AATCGGCCAAAGATGCCGAAAGGGCGTCATTCATCCTGGCCGCCGATGAC
GTCATCGCCTTCGGCTGCGTTGCATTTCCGTCGGCCTTAACAATCAGATT
CGCTGTTGCATTTGTGCCATTGCCCGTTTTCGCAGTTTCCGCATTGTGAT
TTACCATGGCGAAAAGCGGTGGCGTGTAGCTAGTGGCACTCCTCACAGCC
GCCAGCTGCGCGTCCTGATTGCCTCACCCTGGACGCAAGTCCTTGCGACT
TCTGCTCCTGGGGATCCAACACTTGTTGCCGACTTCCTTCCTTCCTCCCG
GAAATGGAGAAATCCAACTGAAGCGAAACGGAAACGGGAGTAATGGTTTA
GTTCGAGAGCTCTTGTCAATAAATAATTGCAATTTCGCTTGTGGCATAAA
AAAAAAAAAAAAAAAA
AT25132.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:06:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32219-RA | 1447 | CG32219-RA | 1..1447 | 1..1447 | 7220 | 99.9 | Plus |
Ac76E.c | 4035 | Ac76E.c | 256..606 | 1369..1019 | 1740 | 99.7 | Minus |
Ac76E.b | 5152 | Ac76E.b | 256..606 | 1369..1019 | 1740 | 99.7 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:58:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 19939324..19940017 | 998..305 | 3425 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 19938484..19938934 | 1447..997 | 2255 | 100 | Minus |
chr3L | 24539361 | chr3L | 19940068..19940238 | 304..134 | 855 | 100 | Minus |
chr3L | 24539361 | chr3L | 19940305..19940437 | 133..1 | 665 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:58:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:58:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19950022..19950715 | 998..305 | 3455 | 99.9 | Minus |
3L | 28110227 | 3L | 19949181..19949632 | 1448..997 | 2260 | 100 | Minus |
3L | 28110227 | 3L | 19950766..19950936 | 304..134 | 855 | 100 | Minus |
3L | 28110227 | 3L | 19951003..19951135 | 133..1 | 665 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:38:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 19943122..19943815 | 998..305 | 3455 | 99.8 | Minus |
3L | 28103327 | 3L | 19942281..19942732 | 1448..997 | 2260 | 100 | Minus |
3L | 28103327 | 3L | 19943866..19944036 | 304..134 | 855 | 100 | Minus |
3L | 28103327 | 3L | 19944103..19944235 | 133..1 | 665 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 04:58:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Porto1 | 4682 | Porto1 DOC5 4682bp | 842..959 | 1226..1113 | 112 | 60 | Minus |
AT25132.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:59:08 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 19938484..19938933 | 998..1447 | 100 | <- | Minus |
chr3L | 19939325..19940017 | 305..997 | 99 | <- | Minus |
chr3L | 19940068..19940238 | 134..304 | 100 | <- | Minus |
chr3L | 19940305..19940437 | 1..133 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:21:00 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..453 | 64..516 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:49:40 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..453 | 64..516 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:47:12 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..453 | 64..516 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:42:16 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..453 | 64..516 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:55:47 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..453 | 64..516 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:26:44 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..1447 | 1..1447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:49:40 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..997 | 1..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:47:12 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..997 | 1..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:42:17 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..1447 | 1..1447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:55:47 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32219-RA | 1..997 | 1..997 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:59:08 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19949182..19949631 | 998..1447 | 100 | <- | Minus |
3L | 19950023..19950715 | 305..997 | 99 | <- | Minus |
3L | 19950766..19950936 | 134..304 | 100 | <- | Minus |
3L | 19951003..19951135 | 1..133 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:59:08 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19949182..19949631 | 998..1447 | 100 | <- | Minus |
3L | 19950023..19950715 | 305..997 | 99 | <- | Minus |
3L | 19950766..19950936 | 134..304 | 100 | <- | Minus |
3L | 19951003..19951135 | 1..133 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:59:08 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19949182..19949631 | 998..1447 | 100 | <- | Minus |
3L | 19950023..19950715 | 305..997 | 99 | <- | Minus |
3L | 19950766..19950936 | 134..304 | 100 | <- | Minus |
3L | 19951003..19951135 | 1..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:47:12 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19942282..19942731 | 998..1447 | 100 | <- | Minus |
arm_3L | 19943123..19943815 | 305..997 | 99 | <- | Minus |
arm_3L | 19943866..19944036 | 134..304 | 100 | <- | Minus |
arm_3L | 19944103..19944235 | 1..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:14:34 Download gff for
AT25132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19942282..19942731 | 998..1447 | 100 | <- | Minus |
3L | 19943123..19943815 | 305..997 | 99 | <- | Minus |
3L | 19943866..19944036 | 134..304 | 100 | <- | Minus |
3L | 19944103..19944235 | 1..133 | 100 | | Minus |
AT25132.hyp Sequence
Translation from 1 to 515
> AT25132.hyp
VHNDKALKILSTLSFKIAFIRMLIQVLVFFLLYRNTYEDCNHNHSAVEDH
YDCGCCPGISNNNGQVVGFHCHKDDQNSILRFASDEESAFAECVPNCFEI
KYPIQEYCCFWSPKLGCTILVNEKYFSNKDLCNNCKYFCQRTTGDGRSSS
YPQKLILLLSLLLIGCNYFQN*
AT25132.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:15:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32219-PA | 150 | CG32219-PA | 1..150 | 22..171 | 850 | 100 | Plus |
CG34258-PA | 165 | CG34258-PA | 59..164 | 69..164 | 177 | 34.9 | Plus |
CG33710-PA | 162 | CG33710-PA | 4..131 | 6..139 | 169 | 30.9 | Plus |
AT25132.pep Sequence
Translation from 63 to 515
> AT25132.pep
MLIQVLVFFLLYRNTYEDCNHNHSAVEDHYDCGCCPGISNNNGQVVGFHC
HKDDQNSILRFASDEESAFAECVPNCFEIKYPIQEYCCFWSPKLGCTILV
NEKYFSNKDLCNNCKYFCQRTTGDGRSSSYPQKLILLLSLLLIGCNYFQN
*
AT25132.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:55:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG13359-PA | 151 | GG13359-PA | 1..151 | 1..150 | 579 | 72.2 | Plus |
Dere\GG13357-PA | 164 | GG13357-PA | 29..132 | 13..120 | 143 | 31.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32219-PA | 150 | CG32219-PA | 1..150 | 1..150 | 850 | 100 | Plus |
CG34258-PA | 165 | CG34258-PA | 59..164 | 48..143 | 177 | 34.9 | Plus |
CG33710-PA | 162 | CG33710-PA | 45..131 | 32..118 | 168 | 35.2 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:55:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15297-PA | 150 | GM15297-PA | 1..150 | 1..150 | 689 | 92 | Plus |
Dsec\GM15191-PA | 163 | GM15191-PA | 30..162 | 13..143 | 149 | 28.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:55:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17217-PA | 147 | GD17217-PA | 1..147 | 1..147 | 666 | 90.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:55:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE22452-PA | 149 | GE22452-PA | 1..149 | 1..148 | 558 | 69.8 | Plus |
Dyak\GE22761-PA | 149 | GE22761-PA | 12..149 | 12..148 | 515 | 69.6 | Plus |
Dyak\GE22760-PA | 164 | GE22760-PA | 22..163 | 6..143 | 157 | 29.3 | Plus |
Dyak\GE22451-PA | 164 | GE22451-PA | 22..163 | 6..143 | 157 | 29.3 | Plus |