BDGP Sequence Production Resources |
Search the DGRC for AT25231
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 252 |
Well: | 31 |
Vector: | pOTB7 |
Associated Gene/Transcript | Strip-RB |
Protein status: | AT25231.pep: gold |
Sequenced Size: | 3167 |
Gene | Date | Evidence |
---|---|---|
CG11526 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11526 | 2003-02-13 | Blastp of sequenced clone |
CG11526 | 2008-04-29 | Release 5.5 accounting |
CG11526 | 2008-08-15 | Release 5.9 accounting |
CG11526 | 2008-12-18 | 5.12 accounting |
3167 bp (3167 high quality bases) assembled on 2003-02-13
GenBank Submission: BT003798
> AT25231.complete ATATGGCTTGGAAACAGAAAAATAAACTCCTTTTTGACACTTGTAAAAAC CAGTTAAGCTGTGGCGCCGTAAACGCCAGATCCTCGATGATGCAGTCCAT CCAGTCTAGGATCAACGTGCTTAACACCATTGCTGCTTCCAGCAAGCGGA TTGAACGCGCCAGCGTTGACACGGACACCCACGATGCGGACGCCAACTGC GACGGGCCCGACCTGGACTTCGTGTACGCGGACGTGGATGGCTATCAGAA CGAGATCGCTGAACTGTATAGCTACACGGAGTTCAGCGAGTTTCAGATGA ACGTGAAGGCCTTCGAGGACCAGATGGAGCTGTACGACCTGCCGCCCAAC TGGCAGAAGCAGGACTCCGCCTCCCAGCGCGGCATCGTGATGAAGCTGGT GGACCAGCTGGAGGTCTCCGATCGATCCTTTCGCATGCAGGCCGCCCGGT GCATCCTTTACCTGGCCCAAGGCTGCTGGGCGGAGGTTCAGTCGGACGAG GAGCAGCACCAGATCACCAGGGACAATGTGCTGGTGCTCTACCAACTCGG CGTCTTCGCCTCCTTCATCGACCTGCTCAACATGGAGATCGAAAGCGCCT GCTCTCCGGACATTGTGGCCGTCAAGATCACTAACGTCACGCTTGTGGAC TCCACGGACATTCGGGTGATCCTATCTGTGCTCTACATCATCACAGAAAC GATTCGCGATGAAAAGGAAAAGGGCAGCGAAGACTACAGAGAGCTGGCCG ACTCCTTTGTGCAAGAAATCAACTCACCACTACCAGATGGCGAACTTCTG GCCGTCAAGCTGTTGGGCATGATCACACGGTTTTGCAGTGGCGCAGCACC GCAGTTCCCCATGAAGAAGGTTGTCCTCCTGCTGTGGAAAGTTTCGCTGC TGGGACTGGGAGGCATGGATGTGCTCAAGAATCTCAAGAACGAGTATCGA TTGAAGGTGGGTTTGGAACCCATCACCGAGGACACGCTGGAGGTTACCAA GTGCATGCGAGCCAGCTCACCGCCGGCCACAGCTACTGATATACTGGAGA ACCAGTATCCCAAGCGGAACTTCAAACGCTCCCTGATGAAGCAGCGTTTT TTGGACGAGCCCGAGCAGATAGACATGGAGATGGGCGGCAACGAGGGTCA AAATAATGCCAACAATGGCAGCGGCAATGGCGGAAACGGGGAGGAGGAAC TCTCTCAGTACTACAGACCCTACGATGACCCCTCTTCGTCCGCATCCACC ACCTCGACGGCAAATCCAAACAACCAGCCTAGCCTAACACAGCCACCCGC TGCTGTGCCTCCGGTACAGATCACGGCTCGCCTGCCCTGGACGCCCAAGG TGCGACAAAAGGACATTGACCAGTTTCTGGACATTTCGCGGAATAAGTTC ATCGGGTATTCGCTGATTGGTGACCACGAGAGTCTGGCTGGACTGCCGCA ACCCATTCACGAGGGCTTTAAGACGCTGCAGCGGCACATGTATATGAGCC TGGCCGATGTGCAAATCAAGAAGGAGGAGGACATAGCTAGGAACCCCATT TCCACACACGAAGACGAAATCAAACTGACCCCGGCTGAGGTGTTGTACCA AGCCATCCTGCCAAACCTGCCGCAGTATATGATCGCCCTCCTTAAGGTCC TGCTGGCAGCTTCGCCAACGTCCAAGTCCAAGACGGAGAGCATTAACATA ATGGCCGATGTGCTGCCTAGGAAGATGCCGCTGACGGCCACCCAATCAAC AAAGCTAACCGTCGACATTGGTCGGCACAAGGAGATCATTGTGAAGGCTG TCTCGGCCATCATCCTGCTATATTTAAAGCATTTCAAGATAAACCATGTT TACCAGTTTGAGTTCATGTCGCAGCATCTCGTGTTCGCCAACTGCATCCC GCTGGTTTTGAAGTTCTTCAATCAGACAATCACGGAGTACGTGAACACCA AGAACTCCATTCCTCTGCTCGATTTCCCGTCGTGTGTGATTGGTGAGCAA CCGGATTTGAGTGGCGATAGCTTTGTGTATGGCGGAGAGATGTCCGATAA GTCCTACTCTTGGCGGAACGTGTTCTCCTGCATAAACCTGCTGCGCATCC TCAACAAGCTGATCAAGTGGAAGCACTCGCGAGTGATGATGCTGGTGGTA TTCAAGTCGGCACCAATCCTGAAGAAGACGCTTAAGGTGCGCCACGCCAT GATGCAGCTGTACGTGCTGAAGCTGCTCAAGATGCAGACCAAGTACTTGG GCCGCCAGTGGCGGAAGTCCAATATGAAGACCATGAGTGCAATTTACGCC AAGGTGCGGCATCGTCTAAACGACGATTGGGCCTTTGGCAACGACTTGGA GTCGCGTCCCTGGGACTTCCAGGCGGAGGAGTGTACGCTGCGGGCCTGCG TGGATCGATTCAACCTGCGACGCTATCCGGAAGCCACCCAGAAGTGTGGA AACAACGGCACGGCAGCTCAGAATGCGGAGAACGCCCAGCAATCCAACAT GATGGCGGGCAACAATGGATGTGGCAATAATGGCGACGCAAATGGCTATG GAAACAACGGTGGCGGTGGCAATGGCGGCCACAACCAGCAGCAGCAGCTC AACGACTATGGTGTGGAGGGTGGCTTTCCCAGCGACGAGATCCTTACCCA CTCGGACTTTGCCTTCTTCGGTCACTCGGGTTGGTGGGATCGCAAGGTCG AGCTGACGGATTACTTCAAGGCCAATTACGCGGTCTGGCTGGAGGAGGAG GTCTACAACAGTCAGACCGACTGGGACGCCCTCTAGGGCAGGGCTGCCAT CGCTGCTCTAATATCCACATGCGCGTCATAAAAGCAAGAAGTTATTAACG TAATTGTAAGCATTAAGAAGTACATTGATATAATCCATGTAGCCCGACCA CGATTGAAACACCAACTACTCACTGAATTGGCAATAATTTGGCAAGCCAC GGGCCTCCGCTGCGCTCCTCTTCACTAACTAGCATACGCGAATACCATAC CCATAGCGATGACAAGCCTGTATATGTAATGATTGTATTTTTTAATTTAT ATATTTATTATTTTACCTGTTCTGCGAGCCCTTGAAACGGATCGCGGCAA TCGGCTTCTGTAGCGGAATAAACAAATTTGCTAGTTCGAAAACGAAAACA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11526-RB | 3377 | CG11526-RB | 217..3361 | 1..3145 | 15560 | 99.6 | Plus |
CG11526-RA | 3596 | CG11526-RA | 608..3580 | 173..3145 | 14700 | 99.6 | Plus |
CG11526-RA | 3596 | CG11526-RA | 1..173 | 1..173 | 865 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3322320..3324046 | 2802..1076 | 8470 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 3324110..3325012 | 1075..173 | 4455 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 3321910..3322253 | 3145..2802 | 1705 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 3328105..3328207 | 174..72 | 515 | 100 | Minus |
chr3L | 24539361 | chr3L | 3328230..3328302 | 73..1 | 350 | 98.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3322910..3324636 | 2802..1076 | 8470 | 99.4 | Minus |
3L | 28110227 | 3L | 3324700..3325602 | 1075..173 | 4515 | 100 | Minus |
3L | 28110227 | 3L | 3322500..3322843 | 3145..2802 | 1720 | 100 | Minus |
3L | 28110227 | 3L | 3328698..3328871 | 174..1 | 870 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3322910..3324636 | 2802..1076 | 8470 | 99.3 | Minus |
3L | 28103327 | 3L | 3324700..3325602 | 1075..173 | 4515 | 100 | Minus |
3L | 28103327 | 3L | 3322500..3322843 | 3145..2802 | 1720 | 100 | Minus |
3L | 28103327 | 3L | 3328698..3328871 | 174..1 | 870 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3322320..3324046 | 1076..2802 | 99 | <- | Minus |
chr3L | 3324110..3325011 | 174..1075 | 99 | <- | Minus |
chr3L | 3328106..3328210 | 69..173 | 97 | <- | Minus |
chr3L | 3328235..3328302 | 1..68 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RB | 1..2784 | 3..2786 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RB | 1..2784 | 3..2786 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RB | 1..2784 | 3..2786 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RB | 1..2784 | 3..2786 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Strip-RB | 1..2784 | 3..2786 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RB | 1..3148 | 1..3149 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RB | 1..3148 | 1..3149 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RB | 1..3148 | 1..3149 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11526-RB | 1..3148 | 1..3149 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Strip-RB | 1..3148 | 1..3149 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3322497..3322842 | 2803..3149 | 99 | <- | Minus |
3L | 3322910..3324636 | 1076..2802 | 99 | <- | Minus |
3L | 3324700..3325601 | 174..1075 | 100 | <- | Minus |
3L | 3328699..3328871 | 1..173 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3322497..3322842 | 2803..3149 | 99 | <- | Minus |
3L | 3322910..3324636 | 1076..2802 | 99 | <- | Minus |
3L | 3324700..3325601 | 174..1075 | 100 | <- | Minus |
3L | 3328699..3328871 | 1..173 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3322497..3322842 | 2803..3149 | 99 | <- | Minus |
3L | 3322910..3324636 | 1076..2802 | 99 | <- | Minus |
3L | 3324700..3325601 | 174..1075 | 100 | <- | Minus |
3L | 3328699..3328871 | 1..173 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3322497..3322842 | 2803..3149 | 99 | <- | Minus |
arm_3L | 3322910..3324636 | 1076..2802 | 99 | <- | Minus |
arm_3L | 3324700..3325601 | 174..1075 | 100 | <- | Minus |
arm_3L | 3328699..3328871 | 1..173 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3322497..3322842 | 2803..3149 | 99 | <- | Minus |
3L | 3322910..3324636 | 1076..2802 | 99 | <- | Minus |
3L | 3324700..3325601 | 174..1075 | 100 | <- | Minus |
3L | 3328699..3328871 | 1..173 | 100 | Minus |
Translation from 2 to 2785
> AT25231.hyp MAWKQKNKLLFDTCKNQLSCGAVNARSSMMQSIQSRINVLNTIAASSKRI ERASVDTDTHDADANCDGPDLDFVYADVDGYQNEIAELYSYTEFSEFQMN VKAFEDQMELYDLPPNWQKQDSASQRGIVMKLVDQLEVSDRSFRMQAARC ILYLAQGCWAEVQSDEEQHQITRDNVLVLYQLGVFASFIDLLNMEIESAC SPDIVAVKITNVTLVDSTDIRVILSVLYIITETIRDEKEKGSEDYRELAD SFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMKKVVLLLWKVSLL GLGGMDVLKNLKNEYRLKVGLEPITEDTLEVTKCMRASSPPATATDILEN QYPKRNFKRSLMKQRFLDEPEQIDMEMGGNEGQNNANNGSGNGGNGEEEL SQYYRPYDDPSSSASTTSTANPNNQPSLTQPPAAVPPVQITARLPWTPKV RQKDIDQFLDISRNKFIGYSLIGDHESLAGLPQPIHEGFKTLQRHMYMSL ADVQIKKEEDIARNPISTHEDEIKLTPAEVLYQAILPNLPQYMIALLKVL LAASPTSKSKTESINIMADVLPRKMPLTATQSTKLTVDIGRHKEIIVKAV SAIILLYLKHFKINHVYQFEFMSQHLVFANCIPLVLKFFNQTITEYVNTK NSIPLLDFPSCVIGEQPDLSGDSFVYGGEMSDKSYSWRNVFSCINLLRIL NKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQTKYLG RQWRKSNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECTLRACV DRFNLRRYPEATQKCGNNGTAAQNAENAQQSNMMAGNNGCGNNGDANGYG NNGGGGNGGHNQQQQLNDYGVEGGFPSDEILTHSDFAFFGHSGWWDRKVE LTDYFKANYAVWLEEEVYNSQTDWDAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Strip-PB | 927 | CG11526-PB | 1..927 | 1..927 | 4849 | 100 | Plus |
Strip-PC | 882 | CG11526-PC | 9..882 | 54..927 | 4570 | 99.7 | Plus |
Strip-PA | 882 | CG11526-PA | 9..882 | 54..927 | 4570 | 99.7 | Plus |
Translation from 2 to 2785
> AT25231.pep MAWKQKNKLLFDTCKNQLSCGAVNARSSMMQSIQSRINVLNTIAASSKRI ERASVDTDTHDADANCDGPDLDFVYADVDGYQNEIAELYSYTEFSEFQMN VKAFEDQMELYDLPPNWQKQDSASQRGIVMKLVDQLEVSDRSFRMQAARC ILYLAQGCWAEVQSDEEQHQITRDNVLVLYQLGVFASFIDLLNMEIESAC SPDIVAVKITNVTLVDSTDIRVILSVLYIITETIRDEKEKGSEDYRELAD SFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMKKVVLLLWKVSLL GLGGMDVLKNLKNEYRLKVGLEPITEDTLEVTKCMRASSPPATATDILEN QYPKRNFKRSLMKQRFLDEPEQIDMEMGGNEGQNNANNGSGNGGNGEEEL SQYYRPYDDPSSSASTTSTANPNNQPSLTQPPAAVPPVQITARLPWTPKV RQKDIDQFLDISRNKFIGYSLIGDHESLAGLPQPIHEGFKTLQRHMYMSL ADVQIKKEEDIARNPISTHEDEIKLTPAEVLYQAILPNLPQYMIALLKVL LAASPTSKSKTESINIMADVLPRKMPLTATQSTKLTVDIGRHKEIIVKAV SAIILLYLKHFKINHVYQFEFMSQHLVFANCIPLVLKFFNQTITEYVNTK NSIPLLDFPSCVIGEQPDLSGDSFVYGGEMSDKSYSWRNVFSCINLLRIL NKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQTKYLG RQWRKSNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECTLRACV DRFNLRRYPEATQKCGNNGTAAQNAENAQQSNMMAGNNGCGNNGDANGYG NNGGGGNGGHNQQQQLNDYGVEGGFPSDEILTHSDFAFFGHSGWWDRKVE LTDYFKANYAVWLEEEVYNSQTDWDAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23912-PA | 889 | GF23912-PA | 9..889 | 54..927 | 4261 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14265-PA | 882 | GG14265-PA | 9..882 | 54..927 | 4708 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15524-PA | 923 | GH15524-PA | 9..923 | 54..927 | 4225 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Strip-PB | 927 | CG11526-PB | 1..927 | 1..927 | 4849 | 100 | Plus |
Strip-PC | 882 | CG11526-PC | 9..882 | 54..927 | 4570 | 99.7 | Plus |
Strip-PA | 882 | CG11526-PA | 9..882 | 54..927 | 4570 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16801-PA | 903 | GI16801-PA | 9..903 | 54..927 | 4221 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16094-PA | 892 | GL16094-PA | 9..892 | 54..927 | 4074 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11051-PA | 898 | GA11051-PA | 9..898 | 54..927 | 4122 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14058-PA | 935 | GM14058-PA | 1..935 | 1..927 | 4936 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13333-PA | 361 | GD13333-PA | 1..361 | 567..927 | 1983 | 99.4 | Plus |
Dsim\GD13332-PA | 286 | GD13332-PA | 1..283 | 1..275 | 1377 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12546-PA | 907 | GJ12546-PA | 9..907 | 54..927 | 4277 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20380-PA | 907 | GK20380-PA | 9..907 | 54..927 | 4129 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20691-PA | 913 | GE20691-PA | 11..913 | 25..927 | 4835 | 98.3 | Plus |