BDGP Sequence Production Resources |
Search the DGRC for AT25352
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 253 |
Well: | 52 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG6744-RA |
Protein status: | AT25352.pep: gold |
Preliminary Size: | 1980 |
Sequenced Size: | 3165 |
Gene | Date | Evidence |
---|---|---|
CG6744 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6744 | 2002-01-18 | Blastp of sequenced clone |
CG6719 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6744 | 2008-04-29 | Release 5.5 accounting |
CG4291 | 2008-08-15 | Release 5.9 accounting |
CG6744 | 2008-08-15 | Release 5.9 accounting |
ia2 | 2008-08-15 | Release 5.9 accounting |
CG6744 | 2008-12-18 | 5.12 accounting |
CG4291 | 2008-12-18 | 5.12 accounting |
ia2 | 2008-12-18 | 5.12 accounting |
3165 bp (3165 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089433
> AT25352.complete TTTTGGCATAGCACATTCAAATTACGGTTATAAATATTCCGAAACTTGTT TAGACCGGCTTTTACGGTTTGTGAAAACGTAAGTTGGCAGGCCAGCCAAT CAGCTGCTGAACTCCGAAAGGAGAACAATGACTCGGGAATCGGCAGTCGC CACCAAAAGAAATTGGGCGATTCTGGCCGCAGGAGTTGGCTTGGTATACG TCCTGGTGCGGCACAGGCACCGACTGCTGTGTCCACTGCGTCGCGTCTGG TCCTTCGGCAGCCTGGTGCCCCAGCGACGCATAGAAGTGATCAACTCCGT CCAGGATCCGACCACGCAATGGGTTTTGAATGAACTGAAGAATCACTGCC AGACTTTTAAAGTCCTTGGATTCGATTGCGAGTGGATCACCGTGGGCGGC AGCCGCAGGCCAGTGGCCTTGCTCCAATTGAGCTCCCATCGGGGTCTATG TGCCTTATTCCGACTGTGCCATATGAAACAAATACCCCAGGATCTGCGGG AGCTTCTCGAGGACGATTCCGTGATCAAAGTGGGCGTGGCACCCCAGGAG GATGCCATGAAACTTTCGCACGACTATGGAGTAGGCGTGGCCAGCACACT GGATCTGCGCTTCCTCTGCGTAATGGCAGGCCACAAACCTGAGGGACTGG GAAAGCTCTCCAAAACTCACCTGAACTATACACTGGACAAGCACTGGCGC CTGGCCTGCTCCAACTGGGAGGCCAAGACTTTGGAGCCAAAACAGCTTGA TTACGCTGCCAACGACGCACTTATGGCGGTGGCCATTTATCAAAAATTGT GCAGGGATCTGCAGCCAAAACACTTTTGGCAACGAAGGCAACTGGACGAC AATAGCATGCACAACAAATTCGAACCCTTTCTCGACGTGGACTTCACGAA AGGCTTCACACTCAACCCGTCCGGCAGCGGAGTAACTCGTTCAAAGGGCT CCACCCAATCCAAAAGCAATAAATGGGTGCCCAAGAAGCAACCGTACCGG CAAATAGCTACCCGAACCAAAGACTTCTACGATAACTGCCTGCTGCAGGC GCCCGATGGCGAACTCCTGTGTACAATTGACAGGCGCAAGGCGTCCTGGT ATCTCAATCAAAATCTGGGCACGCATATAAGCGAAGAGCCCTTCACTGTC CGCCTTAACTTCGAGCCAGCGGGTCGAGCGGTCGGAGATGTGGGGCGCTT CTATCAAACAATCAAGAAAAACCAGTGCGTGGTGTGTGGTGACCGGGATG CGTACATTCGGAAGAACGTGGTACCGCGGGAATACAGAAAGCATTTCCCA TTGGTCATGAAATCTCACACCTCCGACGATGTGCTGCTCCTGTGCCCAAC CTGCCACCAGCTAAGCAACATCTCGGATCTAAGGGTTCGCAGCAAACTGG CCGTGCAGTGCGAAGCTCCTTTCAAGCAGGAAGACGGATCTGTCAAGTAC CATGATGATCCGCAGCTCAAACGAGTCCAATCCGCTGGCAAGGCACTACT TCATCATGGCGCGAAAATACCCGCTGCAAAGAAGGCCGAAATGGAAAAGA CTCTCCTCGATTACTACTCCGATCAAACGGACATCACAGAAGATCTCCTG CGGCAAGCAGCCAGCGTGGAATATCGCGTAGAAAACTCCGACTACTGTCA GCATGGCGAGCGGGTGGTGCAGCAATATCGCGATCATTTCGGCGGCCTGG TGGAGCTGGAGCGCTTATGGCGGCAGCACTTTCTGCACACAATGCAGCCC CGCTTTTTGCCCGAACTCTGGAATGTCAACCACAATGCCGATCGACTGGA AGTTCGCGCCAGCGAGGGTCGCATCGATAAAGCCGATCTTATGGTGGCCG GATTGGATGCGAAGATTAAAGAAACGTGATGCAGGGCTTTTCTGAGTTTG CCACCGGCTTTGTACGTTTTATATTTCAATTTTAATAAAAATAAACTAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT CTAACATGACGGAGTACTGGAAATCAAACGAGCGCAAGTTCTGCGACTTC TGCAAATGCTGGCTGAGCGACAACAAGGCGAGCGTCGCCTTCCACGAGAG TGGCAAGCGGCACAAGATGAATGTGGCCAAGCGGATCACGGACATCAGTC GCAACAGCGAGAAATCGGAGCGGGAGCGCCAGAAAATGGACGCGGAGATC CGCAAGATGGAGGAGGCGGCCATGAAGTCGTACGCACAGGATGTCCATTC GCGCGGTGACATGACCGCCAGGTCCATTAACACGGTAATGAGGGCCACCG CCTCTGCTGCCGCCTCAAGCGGAGCTCACTCCTTCGCCGGAAGATCACGC CAAGTGGACCCCATGCGCCTGGAAGGATTGTCCGACGAAGAAGAAGACCA GAGGCGGGTGGCTCCCGGCAAGGTAACAAGCGACGCAGCCGTGCCCGAGG CATCCCTCTGGGTGGAGGGCAAGTCGGACGAGGGACACACCTACTATTGG AACGTGAAGACCAATGAATCCGTGTGGAAGCCGCCGAAAGAGGGCTATCT GTCCTACGAGGAGTACGAGCGCATCAACCAGCTGGCCATCGACCAGCAGC AGATCTCCCAGGCCGAGGAATCGCTGAAATTCCGCGCCAATGTCGACGAG GAAGTGGCGAGGGTGAACCGAGAGAAGATGAAAGCCTTCCGCAGGACGGA CAATCCCAAGGAAAAGAAGCAGAAGGAGGAGAGGCGTCAGACATTCAAAA CGGAGGAAGAGGCGGCCACCAAAGAGATTGGACAGTGGCAAACTGTGGAA GTGAAAGCACCTGAGCAGCCCATCGACTGGCAGCTACCCAAAACGGATTA CTACAGTGCTGCGCCCGTGGTTTCCGCCTCGAGTGAACCAGAACCTCCAG TCAAAAAGTTCAAGGAGAAGACGATTGGCGGTCTGGATGAGGAGATAGCC GCCACTGCGCCCGCCACGTTCAAGCGGAAATTCATCAGGAAGGGAAACAG CCGCCAGCGCGCCGAGGATTAAGAAGTACTCCATGTGCTTATGTGCATAT TTCACCTACTAGTTAGGTTTAGGCATAGGAAATGTTTAGGTTTTTAAGTG TTTGCTTATACCAATTAAAAAGTGAGATGCGTTTAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7259642..7260769 | 1470..343 | 5640 | 100 | Minus |
chr2L | 23010047 | chr2L | 851604..852329 | 2805..2080 | 3600 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 7258954..7259434 | 1951..1471 | 2405 | 100 | Minus |
chr3R | 27901430 | chr3R | 7260832..7261173 | 342..1 | 1710 | 100 | Minus |
chr2L | 23010047 | chr2L | 851217..851545 | 3134..2806 | 1645 | 100 | Minus |
chr2L | 23010047 | chr2L | 852385..852462 | 2080..2003 | 375 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11434172..11435299 | 1470..343 | 5640 | 100 | Minus |
2L | 23513712 | 2L | 851718..852443 | 2805..2080 | 3600 | 99.7 | Minus |
3R | 32079331 | 3R | 11433484..11433964 | 1951..1471 | 2405 | 100 | Minus |
3R | 32079331 | 3R | 11435362..11435703 | 342..1 | 1710 | 100 | Minus |
2L | 23513712 | 2L | 851329..851659 | 3136..2806 | 1625 | 99.4 | Minus |
2L | 23513712 | 2L | 852499..852576 | 2080..2003 | 375 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11175003..11176130 | 1470..343 | 5640 | 100 | Minus |
2L | 23513712 | 2L | 851718..852443 | 2805..2080 | 3600 | 99.7 | Minus |
3R | 31820162 | 3R | 11174315..11174795 | 1951..1471 | 2405 | 100 | Minus |
3R | 31820162 | 3R | 11176193..11176534 | 342..1 | 1710 | 100 | Minus |
2L | 23513712 | 2L | 851329..851659 | 3136..2806 | 1625 | 99.3 | Minus |
2L | 23513712 | 2L | 852499..852576 | 2080..2003 | 375 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy9 | 5349 | gypsy9 GYPSY9 5349bp | 435..490 | 1915..1971 | 120 | 70.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7258989..7259434 | 1471..1916 | 100 | <- | Minus |
chr3R | 7259642..7260769 | 343..1470 | 100 | <- | Minus |
chr3R | 7260832..7261173 | 1..342 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1752 | 128..1879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1752 | 128..1879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1752 | 128..1879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1752 | 128..1879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1752 | 128..1879 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1947 | 1..1947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1947 | 1..1947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1947 | 1..1947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1947 | 1..1947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6744-RA | 1..1947 | 1..1947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11433484..11433964 | 1471..1951 | 100 | <- | Minus |
3R | 11434172..11435299 | 343..1470 | 100 | <- | Minus |
3R | 11435362..11435703 | 1..342 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11433484..11433964 | 1471..1951 | 100 | <- | Minus |
3R | 11434172..11435299 | 343..1470 | 100 | <- | Minus |
3R | 11435362..11435703 | 1..342 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11433484..11433964 | 1471..1951 | 100 | <- | Minus |
3R | 11434172..11435299 | 343..1470 | 100 | <- | Minus |
3R | 11435362..11435703 | 1..342 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7259206..7259686 | 1471..1951 | 100 | <- | Minus |
arm_3R | 7259894..7261021 | 343..1470 | 100 | <- | Minus |
arm_3R | 7261084..7261425 | 1..342 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11174315..11174795 | 1471..1951 | 100 | <- | Minus |
3R | 11175003..11176130 | 343..1470 | 100 | <- | Minus |
3R | 11176193..11176534 | 1..342 | 100 | Minus |
Translation from 127 to 1878
> AT25352.pep MTRESAVATKRNWAILAAGVGLVYVLVRHRHRLLCPLRRVWSFGSLVPQR RIEVINSVQDPTTQWVLNELKNHCQTFKVLGFDCEWITVGGSRRPVALLQ LSSHRGLCALFRLCHMKQIPQDLRELLEDDSVIKVGVAPQEDAMKLSHDY GVGVASTLDLRFLCVMAGHKPEGLGKLSKTHLNYTLDKHWRLACSNWEAK TLEPKQLDYAANDALMAVAIYQKLCRDLQPKHFWQRRQLDDNSMHNKFEP FLDVDFTKGFTLNPSGSGVTRSKGSTQSKSNKWVPKKQPYRQIATRTKDF YDNCLLQAPDGELLCTIDRRKASWYLNQNLGTHISEEPFTVRLNFEPAGR AVGDVGRFYQTIKKNQCVVCGDRDAYIRKNVVPREYRKHFPLVMKSHTSD DVLLLCPTCHQLSNISDLRVRSKLAVQCEAPFKQEDGSVKYHDDPQLKRV QSAGKALLHHGAKIPAAKKAEMEKTLLDYYSDQTDITEDLLRQAASVEYR VENSDYCQHGERVVQQYRDHFGGLVELERLWRQHFLHTMQPRFLPELWNV NHNADRLEVRASEGRIDKADLMVAGLDAKIKET*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18156-PA | 586 | GF18156-PA | 1..584 | 1..581 | 2498 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17221-PA | 579 | GG17221-PA | 1..578 | 1..582 | 2775 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15379-PA | 591 | GH15379-PA | 1..582 | 1..580 | 1992 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Exd2-PB | 583 | CG6744-PB | 1..583 | 1..583 | 3109 | 100 | Plus |
Exd2-PA | 583 | CG6744-PA | 1..583 | 1..583 | 3109 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22458-PA | 595 | GI22458-PA | 1..587 | 1..580 | 1993 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12271-PA | 578 | GL12271-PA | 2..574 | 6..579 | 2201 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19827-PA | 578 | GA19827-PA | 2..574 | 6..579 | 2199 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26098-PA | 583 | GM26098-PA | 1..583 | 1..583 | 3042 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20659-PA | 541 | GD20659-PA | 1..541 | 1..583 | 2763 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10057-PA | 591 | GJ10057-PA | 1..581 | 1..578 | 2061 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11793-PA | 598 | GK11793-PA | 5..586 | 8..579 | 2148 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24622-PA | 583 | GE24622-PA | 1..582 | 1..582 | 2902 | 91.4 | Plus |
Translation from 127 to 1878
> AT25352.hyp MTRESAVATKRNWAILAAGVGLVYVLVRHRHRLLCPLRRVWSFGSLVPQR RIEVINSVQDPTTQWVLNELKNHCQTFKVLGFDCEWITVGGSRRPVALLQ LSSHRGLCALFRLCHMKQIPQDLRELLEDDSVIKVGVAPQEDAMKLSHDY GVGVASTLDLRFLCVMAGHKPEGLGKLSKTHLNYTLDKHWRLACSNWEAK TLEPKQLDYAANDALMAVAIYQKLCRDLQPKHFWQRRQLDDNSMHNKFEP FLDVDFTKGFTLNPSGSGVTRSKGSTQSKSNKWVPKKQPYRQIATRTKDF YDNCLLQAPDGELLCTIDRRKASWYLNQNLGTHISEEPFTVRLNFEPAGR AVGDVGRFYQTIKKNQCVVCGDRDAYIRKNVVPREYRKHFPLVMKSHTSD DVLLLCPTCHQLSNISDLRVRSKLAVQCEAPFKQEDGSVKYHDDPQLKRV QSAGKALLHHGAKIPAAKKAEMEKTLLDYYSDQTDITEDLLRQAASVEYR VENSDYCQHGERVVQQYRDHFGGLVELERLWRQHFLHTMQPRFLPELWNV NHNADRLEVRASEGRIDKADLMVAGLDAKIKET*