BDGP Sequence Production Resources |
Search the DGRC for AT25367
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 253 |
Well: | 67 |
Vector: | pOTB7 |
Associated Gene/Transcript | Hex-t2-RA |
Protein status: | AT25367.pep: gold |
Sequenced Size: | 1589 |
Gene | Date | Evidence |
---|---|---|
Hex-t2-RA | 2009-06-22 | Replacement based on scoring |
1589 bp assembled on 2009-07-30
GenBank Submission: BT088988.1
> AT25367.complete GAAATTTACCTCATGAGAAAGTCAACTAGACTTTTAACTCATTCTCTATT CGGCCCTGTATTTAAAATTTTGTTTCATAACAAAACAGTTTGTGGAGGCT GTAATAGGAAAATGCCGAGCCTGGTGAACACGGAAATTGAAGCCGCGGTC AAGGGCTTCCTGATCGACCAGGAGAAGATGACCGAGGTGGTGGAGCGCAT GACCAAGGAGATAAAGATGGGCCTGGCCAAGGACACGCATGCACGAGCGG TGATCAAGTGCTTCGTCAGCCATGTGCAAGATCTGCCCACTGGCAAGGAG CGGGGAAAGTATTTGGCCCTGGATCTGGGTGGCTCTAATTTCAGGGTGCT TCTGGTGAACCTGATTAGCAACTCGGACGTGGAAACCATGTCGAAGGGCT ATAATTTTCCTCAAACTCTGATGTCCGGATCGGGAAAGGCGCTTTTCGAC TTCCTTGCCGAATGCCTGTCGGAGTTTTGTCACTCCCATGGCCTGGAGAA TGAATCACTGGCTCTGGGCTTCACCTTCTCGTTTCCGCTCCAGCAGCAGG GACTCTCCAAGGGTATCCTTGTGGCCTGGACCAAAGGATTCAGCTGCGAA GGCGTGGTGGGCAAGAATGTGGTGAGTCTTCTCCAGGAGGCAATCGATCG AAGGGGCGATCTAAAGATCAATACCGTCGCCATTCTCAACGATACGGTGG GCACTCTGATGTCCTGCGCCTTCTATCATCCCAACTGCCGGATTGGATTG ATCGTGGGAACCGGCTCCAATGCGTGCTATGTGGAGAAAACAGTAAATGC CGAATGCTTCGAAGGATACCAGACCAGTCCCAAGCCATCAATGATAATCA ACTGCGAGTGGGGCGCCTTTGGGGACAATGGTGTCCTGGAGTTCGTTCGA ACTTCCTACGACAAGGCAGTCGACAAGGTAACACCCAATCCCGGCAAGCA GACGTTCGAAAAGTGCATATCGGGCATGTATATGGGTGAACTTGTACGTT TGGTCATCACCGATATGATTGCCAAGGGTTTTATGTTCCACGGCATCATT TCCGAGAAGATCCAGGAGCGATGGAGCTTCAAAACCGCCTATATTTCCGA TGTTGAAAGTGATGCACCTGGCGAGTATCGCAATTGCAATAAGGTCCTTA GCGAATTGGGCATCTTGGGCTGCCAGGAACCCGACAAAGAGGCCCTGCGA TACATCTGCGAGGCGGTGTCCTCCAGGTCTGCCAAGCTATGTGCCTGCGG CCTGGTCACCATCATCAACAAGATGAACATCAACGAGGTGGCCATCGGCA TAGACGGTAGCGTGTATCGCTTCCATCCCAAGTACCACGACATGCTCCAG TACCACATGAAGAAGCTCCTCAAGCCGGGCGTCAAGTTTGAGCTGGTTGT TTCGGAGGACGGATCCGGAAGAGGAGCAGCTCTCGTGGCGGCCACCGCAG TCCAGGCCAAAAGCAAGCTCTAAATTCGAAGTTGATATTCTTCAAATGCA TGGGAAACGTTACGGACAATGATATATGAGCACAAAATTATGGAAGAAGA AATAAAGATTTAAGGATATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hex-t2.a | 3275 | Hex-t2.a | 1602..3172 | 1..1571 | 7795 | 99.7 | Plus |
Hex-t2-RA | 1697 | Hex-t2-RA | 24..1594 | 1..1571 | 7795 | 99.7 | Plus |
Hex-A.a | 2520 | Hex-A.a | 735..831 | 254..350 | 245 | 83.5 | Plus |
Hex-A.a | 2520 | Hex-A.a | 1414..1482 | 936..1004 | 195 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22274405..22275353 | 621..1569 | 4730 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 22273697..22274323 | 1..627 | 3045 | 99 | Plus |
chrX | 22417052 | chrX | 9478300..9478430 | 220..350 | 250 | 79.4 | Plus |
chrX | 22417052 | chrX | 9479013..9479081 | 936..1004 | 195 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26451379..26452329 | 621..1571 | 4695 | 99.6 | Plus |
3R | 32079331 | 3R | 26450671..26451297 | 1..627 | 3135 | 100 | Plus |
X | 23542271 | X | 9586585..9586715 | 220..350 | 250 | 79.4 | Plus |
X | 23542271 | X | 9587298..9587366 | 936..1004 | 195 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 26192210..26193160 | 621..1571 | 4695 | 99.5 | Plus |
3R | 31820162 | 3R | 26191502..26192128 | 1..627 | 3135 | 100 | Plus |
X | 23527363 | X | 9594717..9594813 | 254..350 | 245 | 83.5 | Plus |
X | 23527363 | X | 9595396..9595464 | 936..1004 | 195 | 85.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22273697..22274317 | 1..621 | 99 | -> | Plus |
chr3R | 22274406..22275353 | 622..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-t2-RA | 1..1461 | 13..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-t2-RA | 1..1461 | 13..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-t2-RA | 1..1461 | 13..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-t2-RA | 1..1461 | 13..1473 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-t2-RA | 20..1588 | 1..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-t2-RA | 20..1588 | 1..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-t2-RA | 20..1588 | 1..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hex-t2-RA | 1..1569 | 1..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26450671..26451291 | 1..621 | 100 | -> | Plus |
3R | 26451380..26452327 | 622..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26450671..26451291 | 1..621 | 100 | -> | Plus |
3R | 26451380..26452327 | 622..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26450671..26451291 | 1..621 | 100 | -> | Plus |
3R | 26451380..26452327 | 622..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22276393..22277013 | 1..621 | 100 | -> | Plus |
arm_3R | 22277102..22278049 | 622..1569 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26191502..26192122 | 1..621 | 100 | -> | Plus |
3R | 26192211..26193158 | 622..1569 | 99 | Plus |
Translation from 0 to 1472
> AT25367.hyp EIYLMRKSTRLLTHSLFGPVFKILFHNKTVCGGCNRKMPSLVNTEIEAAV KGFLIDQEKMTEVVERMTKEIKMGLAKDTHARAVIKCFVSHVQDLPTGKE RGKYLALDLGGSNFRVLLVNLISNSDVETMSKGYNFPQTLMSGSGKALFD FLAECLSEFCHSHGLENESLALGFTFSFPLQQQGLSKGILVAWTKGFSCE GVVGKNVVSLLQEAIDRRGDLKINTVAILNDTVGTLMSCAFYHPNCRIGL IVGTGSNACYVEKTVNAECFEGYQTSPKPSMIINCEWGAFGDNGVLEFVR TSYDKAVDKVTPNPGKQTFEKCISGMYMGELVRLVITDMIAKGFMFHGII SEKIQERWSFKTAYISDVESDAPGEYRNCNKVLSELGILGCQEPDKEALR YICEAVSSRSAKLCACGLVTIINKMNINEVAIGIDGSVYRFHPKYHDMLQ YHMKKLLKPGVKFELVVSEDGSGRGAALVAATAVQAKSKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hex-t2-PA | 486 | CG32849-PA | 1..486 | 5..490 | 2533 | 100 | Plus |
Hex-A-PC | 448 | CG3001-PC | 10..438 | 54..483 | 1283 | 56.5 | Plus |
Hex-A-PB | 448 | CG3001-PB | 10..438 | 54..483 | 1283 | 56.5 | Plus |
Hex-A-PA | 541 | CG3001-PA | 103..531 | 54..483 | 1283 | 56.5 | Plus |
Hex-C-PA | 454 | CG8094-PA | 1..454 | 41..487 | 1046 | 46.5 | Plus |
Translation from 0 to 1472
> AT25367.pep EIYLMRKSTRLLTHSLFGPVFKILFHNKTVCGGCNRKMPSLVNTEIEAAV KGFLIDQEKMTEVVERMTKEIKMGLAKDTHARAVIKCFVSHVQDLPTGKE RGKYLALDLGGSNFRVLLVNLISNSDVETMSKGYNFPQTLMSGSGKALFD FLAECLSEFCHSHGLENESLALGFTFSFPLQQQGLSKGILVAWTKGFSCE GVVGKNVVSLLQEAIDRRGDLKINTVAILNDTVGTLMSCAFYHPNCRIGL IVGTGSNACYVEKTVNAECFEGYQTSPKPSMIINCEWGAFGDNGVLEFVR TSYDKAVDKVTPNPGKQTFEKCISGMYMGELVRLVITDMIAKGFMFHGII SEKIQERWSFKTAYISDVESDAPGEYRNCNKVLSELGILGCQEPDKEALR YICEAVSSRSAKLCACGLVTIINKMNINEVAIGIDGSVYRFHPKYHDMLQ YHMKKLLKPGVKFELVVSEDGSGRGAALVAATAVQAKSKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20727-PA | 447 | GF20727-PA | 1..447 | 41..487 | 1803 | 75.6 | Plus |
Dana\GF22320-PA | 539 | GF22320-PA | 99..529 | 53..483 | 1342 | 56.8 | Plus |
Dana\GF12622-PA | 454 | GF12622-PA | 1..454 | 41..487 | 1044 | 46.5 | Plus |
Dana\GF20735-PA | 469 | GF20735-PA | 17..459 | 45..489 | 871 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11478-PA | 453 | GG11478-PA | 1..453 | 38..490 | 2228 | 90.1 | Plus |
Dere\GG18317-PA | 539 | GG18317-PA | 100..529 | 53..483 | 1320 | 56.4 | Plus |
Dere\GG22367-PA | 454 | GG22367-PA | 1..454 | 41..487 | 1044 | 46 | Plus |
Dere\GG11476-PA | 465 | GG11476-PA | 13..455 | 45..489 | 897 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19419-PA | 449 | GH19419-PA | 14..447 | 50..483 | 1517 | 64.3 | Plus |
Dgri\GH12375-PA | 538 | GH12375-PA | 100..529 | 53..483 | 1340 | 57.3 | Plus |
Dgri\GH21465-PA | 454 | GH21465-PA | 1..454 | 41..487 | 1106 | 48.9 | Plus |
Dgri\GH19418-PA | 459 | GH19418-PA | 6..448 | 39..483 | 944 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hex-t2-PA | 486 | CG32849-PA | 1..486 | 5..490 | 2533 | 100 | Plus |
Hex-A-PC | 448 | CG3001-PC | 10..438 | 54..483 | 1283 | 56.5 | Plus |
Hex-A-PB | 448 | CG3001-PB | 10..438 | 54..483 | 1283 | 56.5 | Plus |
Hex-A-PA | 541 | CG3001-PA | 103..531 | 54..483 | 1283 | 56.5 | Plus |
Hex-C-PA | 454 | CG8094-PA | 1..454 | 41..487 | 1046 | 46.5 | Plus |
Hex-t1-PA | 465 | CG33102-PA | 13..455 | 45..489 | 842 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22624-PA | 451 | GI22624-PA | 18..450 | 53..485 | 1495 | 64.2 | Plus |
Dmoj\GI14754-PA | 547 | GI14754-PA | 109..538 | 53..483 | 1348 | 57.8 | Plus |
Dmoj\GI19942-PA | 454 | GI19942-PA | 1..453 | 41..486 | 1072 | 46.7 | Plus |
Dmoj\GI22621-PA | 454 | GI22621-PA | 17..454 | 50..489 | 988 | 42.7 | Plus |
Dmoj\GI22622-PA | 458 | GI22622-PA | 6..452 | 39..487 | 985 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21847-PA | 456 | GL21847-PA | 4..451 | 38..485 | 1898 | 75.7 | Plus |
Dper\GL11018-PA | 454 | GL11018-PA | 1..454 | 41..487 | 1092 | 46.9 | Plus |
Dper\GL21996-PA | 466 | GL21996-PA | 3..450 | 18..483 | 865 | 35 | Plus |
Dper\GL15877-PA | 397 | GL15877-PA | 222..387 | 318..483 | 485 | 54.2 | Plus |
Dper\GL15877-PA | 397 | GL15877-PA | 110..220 | 53..163 | 337 | 55.9 | Plus |
Dper\GL21460-PA | 66 | GL21460-PA | 1..61 | 425..485 | 278 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26424-PA | 456 | GA26424-PA | 4..451 | 38..485 | 1896 | 75.4 | Plus |
Dpse\GA15574-PA | 549 | GA15574-PA | 110..539 | 53..483 | 1331 | 57.3 | Plus |
Dpse\GA20820-PA | 454 | GA20820-PA | 1..454 | 41..487 | 1092 | 46.9 | Plus |
Dpse\GA17282-PA | 466 | GA17282-PA | 3..450 | 18..483 | 862 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10321-PA | 453 | GM10321-PA | 1..453 | 38..490 | 2351 | 96.7 | Plus |
Dsec\GM20151-PA | 454 | GM20151-PA | 1..454 | 41..487 | 1042 | 46.1 | Plus |
Dsec\GM10320-PA | 465 | GM10320-PA | 13..455 | 45..489 | 870 | 36 | Plus |
Dsec\GM11376-PA | 388 | GM11376-PA | 102..304 | 53..255 | 653 | 59.6 | Plus |
Dsec\GM11377-PA | 155 | GM11377-PA | 1..147 | 339..485 | 403 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Hex-t2-PA | 453 | GD21282-PA | 1..453 | 38..490 | 2363 | 97.1 | Plus |
Dsim\GD25630-PA | 454 | GD25630-PA | 1..454 | 41..487 | 1048 | 46.3 | Plus |
Dsim\Hex-t1-PA | 400 | GD21281-PA | 13..236 | 45..268 | 464 | 37.9 | Plus |
Dsim\Hex-t1-PA | 400 | GD21281-PA | 228..390 | 327..489 | 266 | 31.3 | Plus |
Dsim\GD24777-PA | 69 | GD24777-PA | 1..59 | 425..483 | 203 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23870-PA | 450 | GJ23870-PA | 18..450 | 53..485 | 1448 | 61.9 | Plus |
Dvir\GJ23866-PA | 451 | GJ23866-PA | 16..446 | 51..481 | 1411 | 57.8 | Plus |
Dvir\GJ19157-PA | 561 | GJ19157-PA | 123..552 | 53..483 | 1346 | 57.8 | Plus |
Dvir\GJ15111-PA | 454 | GJ15111-PA | 1..454 | 41..487 | 1080 | 47.7 | Plus |
Dvir\GJ23869-PA | 458 | GJ23869-PA | 17..447 | 51..483 | 996 | 41.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18967-PA | 460 | GK18967-PA | 17..439 | 53..475 | 1581 | 66.2 | Plus |
Dwil\GK19144-PA | 471 | GK19144-PA | 21..467 | 45..487 | 1402 | 58.4 | Plus |
Dwil\GK16160-PA | 535 | GK16160-PA | 97..526 | 53..483 | 1340 | 57.1 | Plus |
Dwil\GK21542-PA | 454 | GK21542-PA | 1..454 | 41..487 | 1107 | 47.6 | Plus |
Dwil\GK13969-PA | 468 | GK13969-PA | 7..448 | 39..480 | 966 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Hex-t2-PA | 453 | GE23669-PA | 1..453 | 38..490 | 2270 | 91.6 | Plus |
Dyak\Hex-A-PA | 546 | GE17799-PA | 107..536 | 53..483 | 1324 | 56.4 | Plus |
Dyak\Hex-C-PA | 454 | GE12255-PA | 1..454 | 41..487 | 1053 | 46.2 | Plus |
Dyak\Hex-t1-PA | 465 | GE23668-PA | 13..449 | 45..483 | 892 | 37.4 | Plus |