![]() | BDGP Sequence Production Resources |
Search the DGRC for AT25465
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 254 |
Well: | 65 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG6380-RA |
Protein status: | AT25465.pep: gold |
Preliminary Size: | 1038 |
Sequenced Size: | 1088 |
Gene | Date | Evidence |
---|---|---|
CG6380 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6380 | 2004-01-09 | Blastp of sequenced clone |
CG6380 | 2008-04-29 | Release 5.5 accounting |
CG6380 | 2008-08-15 | Release 5.9 accounting |
CG6380 | 2008-12-18 | 5.12 accounting |
1088 bp (1088 high quality bases) assembled on 2004-01-09
GenBank Submission: BT011398
> AT25465.complete GCCATATAGGGCACACACAAGTTTACACTAATACATTTTAGTTCGGTAAT TAGTTCCTTTCAAAGGCCAAAACTACACATAGCTACAAACAAGAATGGAT GGGGACCAAGTAAAGGGCATCCTGAAGTCGGGAAACAATAGTGCGCAATT TAGCCTGAAGGCAGCCAAATTTGATGAGGTCAACATACTGGCCACGTTCC ACCCGGCTGGTAAGGACTACGGCCACATGATCATCGACGAACCAAAGACA CCCTTCGTCTTTGAGGAGGATTTGCCAAAGGAGTTGGATACAAATGCCCT GATCGAAAAGTTGAGACACACATCAAAGTCAGAAATGCCGGCATTTGGCA TCGAAGGAGACTCAGAAGAATCCTCGGCGGATGAGGACTTTCCCGAGTCT GTAGAGGAAAAAGTGCGTAGAATGGAGTTTGAGAGGCGGCGAAAAGTGCA TTACAAGGAGTTCTATTCGGTTCCACTGGCTCGACGTCTTATAGCCGACG AGTTTGCCGAGTTGACCAGTTCAGAGTTTAATATTCACTGCGAAGGGGGA ATGGAATCTTGTGAAGCGTGCAGTGAAAACAATCAACTCGACGGCGAAGC AAGCAACTTGACGCAAACAAAATACTCATATTCTGAAAGTCAATCCGAAT ACAGGATATCAGATCATTCTGAGCCTGAACCAGGTTTCTCCCCCAGCCAT CACTGCTACCAAAAACTGAAGGCCGAGCTCTTTAGCAAAGCAGAGCCGGA AGAATTGGCCTCTTTAACGCACTTGCATCGAATGCCATCGGTCAACGATG ATGAACCAAGTCGCGAGCCTCGCGTCCCATACCCTTCGGTTGTTCCGACT CAAACCCAAAATCTACATGAACACAAGAGTTCACTGAAAATAACGTCCGA GAAGCCTACTCCTGCTCGTATATGTAAATCCAACCCTGATAATCGTCCTG GCACTTCTAAGAAAGAGACCCGCTGAAATCATTCAGTAGTGTTAAAAATT GCAAAGTTATATTAAAGAAACTTGTAATTATAACAAACCATTGGGGATTA AAACTTGTGTATGCATTTGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6380-RA | 1074 | CG6380-RA | 6..1074 | 1..1069 | 5345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 17289828..17290896 | 1069..1 | 5345 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 17291133..17292202 | 1070..1 | 5350 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 17291133..17292202 | 1070..1 | 5350 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Juan | 4236 | Juan JUAN 4236bp | 3070..3140 | 976..1045 | 109 | 63.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 17289828..17290896 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 1..882 | 95..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 1..882 | 95..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 1..882 | 95..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 1..882 | 95..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 1..882 | 95..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 6..1038 | 1..1033 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 1..1069 | 1..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 1..1069 | 1..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 6..1038 | 1..1033 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6380-RA | 1..1069 | 1..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17291134..17292202 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17291134..17292202 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17291134..17292202 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 17291134..17292202 | 1..1069 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17291134..17292202 | 1..1069 | 100 | Minus |
Translation from 94 to 975
> AT25465.hyp MDGDQVKGILKSGNNSAQFSLKAAKFDEVNILATFHPAGKDYGHMIIDEP KTPFVFEEDLPKELDTNALIEKLRHTSKSEMPAFGIEGDSEESSADEDFP ESVEEKVRRMEFERRRKVHYKEFYSVPLARRLIADEFAELTSSEFNIHCE GGMESCEACSENNQLDGEASNLTQTKYSYSESQSEYRISDHSEPEPGFSP SHHCYQKLKAELFSKAEPEELASLTHLHRMPSVNDDEPSREPRVPYPSVV PTQTQNLHEHKSSLKITSEKPTPARICKSNPDNRPGTSKKETR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6380-PB | 293 | CG6380-PB | 1..293 | 1..293 | 1541 | 100 | Plus |
CG6380-PA | 293 | CG6380-PA | 1..293 | 1..293 | 1541 | 100 | Plus |
I-2-PA | 205 | CG10574-PA | 12..144 | 7..136 | 315 | 51.5 | Plus |
I-2-PB | 310 | CG10574-PB | 117..249 | 7..136 | 315 | 51.5 | Plus |
CG12620-PB | 287 | CG12620-PB | 4..237 | 22..251 | 259 | 30.9 | Plus |
Translation from 94 to 975
> AT25465.pep MDGDQVKGILKSGNNSAQFSLKAAKFDEVNILATFHPAGKDYGHMIIDEP KTPFVFEEDLPKELDTNALIEKLRHTSKSEMPAFGIEGDSEESSADEDFP ESVEEKVRRMEFERRRKVHYKEFYSVPLARRLIADEFAELTSSEFNIHCE GGMESCEACSENNQLDGEASNLTQTKYSYSESQSEYRISDHSEPEPGFSP SHHCYQKLKAELFSKAEPEELASLTHLHRMPSVNDDEPSREPRVPYPSVV PTQTQNLHEHKSSLKITSEKPTPARICKSNPDNRPGTSKKETR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15110-PA | 288 | GF15110-PA | 3..281 | 1..285 | 672 | 53.7 | Plus |
Dana\GF25124-PA | 210 | GF25124-PA | 12..141 | 7..133 | 259 | 53.4 | Plus |
Dana\GF14784-PA | 291 | GF14784-PA | 71..212 | 99..238 | 201 | 38 | Plus |
Dana\GF14783-PA | 308 | GF14783-PA | 76..189 | 98..208 | 172 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21754-PA | 293 | GG21754-PA | 1..293 | 1..293 | 1280 | 80.5 | Plus |
Dere\GG14003-PA | 205 | GG14003-PA | 12..144 | 7..136 | 248 | 52.9 | Plus |
Dere\GG21073-PA | 293 | GG21073-PA | 39..192 | 62..212 | 226 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10084-PA | 240 | GH10084-PA | 7..215 | 6..211 | 426 | 53.1 | Plus |
Dgri\GH16012-PA | 207 | GH16012-PA | 12..143 | 7..136 | 265 | 53.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6380-PB | 293 | CG6380-PB | 1..293 | 1..293 | 1541 | 100 | Plus |
CG6380-PA | 293 | CG6380-PA | 1..293 | 1..293 | 1541 | 100 | Plus |
I-2-PA | 205 | CG10574-PA | 12..144 | 7..136 | 315 | 51.5 | Plus |
I-2-PB | 310 | CG10574-PB | 117..249 | 7..136 | 315 | 51.5 | Plus |
CG12620-PB | 287 | CG12620-PB | 4..237 | 22..251 | 259 | 30.9 | Plus |
CG12620-PA | 287 | CG12620-PA | 4..237 | 22..251 | 259 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14265-PA | 249 | GI14265-PA | 1..221 | 1..211 | 564 | 58.3 | Plus |
Dmoj\GI12278-PA | 202 | GI12278-PA | 12..144 | 7..136 | 253 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19746-PA | 262 | GL19746-PA | 1..246 | 1..241 | 563 | 52.6 | Plus |
Dper\GL22570-PA | 281 | GL22570-PA | 1..265 | 1..250 | 554 | 51.3 | Plus |
Dper\GL22569-PA | 281 | GL22569-PA | 1..265 | 1..250 | 554 | 51.3 | Plus |
Dper\GL16322-PA | 199 | GL16322-PA | 12..136 | 7..133 | 262 | 54.6 | Plus |
Dper\GL14331-PA | 233 | GL14331-PA | 1..214 | 1..210 | 197 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19552-PA | 262 | GA19552-PA | 1..246 | 1..241 | 563 | 52.6 | Plus |
Dpse\GA24711-PA | 281 | GA24711-PA | 1..265 | 1..250 | 552 | 50.9 | Plus |
Dpse\GA24707-PA | 281 | GA24707-PA | 1..265 | 1..250 | 552 | 50.9 | Plus |
Dpse\GA10405-PA | 199 | GA10405-PA | 12..136 | 7..133 | 262 | 54.6 | Plus |
Dpse\GA25070-PA | 233 | GA25070-PA | 1..214 | 1..210 | 195 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17136-PA | 292 | GM17136-PA | 1..292 | 1..293 | 1465 | 95.2 | Plus |
Dsec\GM24837-PA | 310 | GM24837-PA | 116..246 | 6..133 | 245 | 53 | Plus |
Dsec\GM17223-PA | 271 | GM17223-PA | 36..181 | 69..211 | 214 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21878-PA | 293 | GD21878-PA | 1..293 | 1..293 | 1479 | 94.9 | Plus |
Dsim\GD24098-PA | 273 | GD24098-PA | 36..181 | 69..211 | 220 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16238-PA | 260 | GJ16238-PA | 1..218 | 1..212 | 571 | 59 | Plus |
Dvir\GJ13214-PA | 205 | GJ13214-PA | 12..141 | 7..133 | 247 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23801-PA | 277 | GK23801-PA | 3..254 | 2..250 | 602 | 54.9 | Plus |
Dwil\GK11748-PA | 198 | GK11748-PA | 12..143 | 7..136 | 245 | 54.7 | Plus |
Dwil\GK23876-PA | 186 | GK23876-PA | 8..176 | 48..211 | 219 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13145-PA | 294 | GE13145-PA | 1..294 | 1..293 | 1297 | 83.7 | Plus |
Dyak\GE20298-PA | 318 | GE20298-PA | 125..254 | 7..133 | 247 | 52.6 | Plus |
Dyak\GE12782-PA | 290 | GE12782-PA | 46..205 | 69..219 | 213 | 38.1 | Plus |