BDGP Sequence Production Resources |
Search the DGRC for AT25469
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 254 |
Well: | 69 |
Vector: | pOTB7 |
Associated Gene/Transcript | alphaTub84B-RA |
Protein status: | AT25469.pep: gold |
Sequenced Size: | 1758 |
Gene | Date | Evidence |
---|---|---|
CG1913 | 2004-03-31 | Blastp of sequenced clone |
alphaTub84B | 2008-04-29 | Release 5.5 accounting |
alphaTub84B | 2008-08-15 | Release 5.9 accounting |
alphaTub84B | 2008-12-18 | 5.12 accounting |
1758 bp (1758 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012506
> AT25469.complete CGTTTGTCAAGCCTCATAGCCGGCAGTTCGAACGTATACGCTCTCTGAGT CAGACCTCGAAATCGTAGCTCTACACAATTCTGTGAATTTTCCTTGTCGC GTGTGAAACACTTCCAATAAAAACTCAATATGCGTGAATGTATCTCTATC CATGTTGGTCAGGCTGGTGTCCAGATTGGAAACGCCTGCTGGGAGCTCTA CTGCTTGGAGCACGGCATCCAGCCCGATGGCCAGATGCCGTCTGACAAGA CCGTGGGCGGAGGTGATGACTCGTTCAACACCTTCTTCAGCGAGACTGGA GCTGGCAAGCACGTGCCCCGCGCCGTGTTTGTGGATCTGGAACCCACTGT GGTCGATGAGGTCCGTACCGGAACCTACCGTCAGCTGTTCCACCCTGAGC AGCTGATCACTGGTAAGGAGGATGCGGCCAACAACTACGCCCGTGGCCAC TACACCATCGGCAAGGAGATCGTCGATCTGGTTCTGGACAGGATCCGCAA GCTGGCCGATCAGTGCACCGGTCTGCAGGGCTTCCTCATCTTCCACTCGT TCGGTGGAGGTACCGGCTCCGGCTTCACCTCGCTGCTGATGGAGCGTCTC TCCGTGGACTACGGCAAGAAGTCCAAGCTGGAGTTCGCCATCTACCCAGC CCCCCAGGTGTCCACTGCCGTGGTCGAGCCCTACAACTCCATCCTGACCA CCCACACCACCCTGGAGCATTCCGACTGCGCCTTCATGGTCGACAACGAG GCTATCTACGACATCTGCCGCCGCAACCTGGACATTGAGCGCCCCACGTA CACCAACCTGAACCGTCTGATTGGCCAGATCGTGTCCTCGATTACCGCCT CTCTGCGATTCGATGGTGCCCTTAACGTGGATCTGACTGAGTTCCAGACC AACTTGGTGCCCTACCCACGTATTCACTTCCCTCTGGTGACCTACGCCCC CGTTATCTCCGCCGAGAAGGCCTACCACGAGCAGCTGTCGGTGGCTGAGA TCACCAACGCCTGCTTCGAGCCGGCCAACCAGATGGTCAAGTGCGATCCC CGTCACGGCAAGTACATGGCCTGCTGCATGCTGTACCGCGGTGATGTTGT GCCCAAGGACGTCAACGCCGCTATTGCCACCATCAAGACCAAGCGCACCA TTCAATTCGTCGACTGGTGCCCCACTGGCTTCAAGGTTGGCATCAACTAC CAGCCACCCACCGTGGTGCCTGGAGGTGATTTGGCCAAGGTGCAGCGTGC CGTGTGCATGTTGTCCAACACCACGGCCATCGCCGAGGCCTGGGCCCGTC TGGACCACAAGTTCGATCTGATGTACGCCAAGCGTGCCTTCGTCCACTGG TACGTTGGTGAGGGTATGGAGGAGGGAGAGTTCTCCGAGGCCCGTGAGGA TTTGGCTGCCCTCGAGAAGGACTACGAGGAGGTCGGCATGGACTCCGGTG ACGGCGAGGGTGAGGGCGCTGAGGAGTACTAAGCGTCGCGCCACTTCAAC GCTCGATGGGAGCGTCATTGGTGGGCGGGGTAACCGTCGAAATCAGTGTT TACGCTTCCAATCGCAACAAAAAATTCACTGCAACACTGAAAAGCATACG AAAACGATGAAGATTGTACGAGAAACCATAAAGTATTTTATCCACAAAGA CACGTATAGCAGAAAAGCCAAGTTAACTCGGCGATAAGTTGTGTACACAA GAATAAAATCGGCCAGATTCAGTGTTGTCAGAAATAAGAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
alphaTub84B.c | 2456 | alphaTub84B.c | 249..1990 | 1..1742 | 8665 | 99.8 | Plus |
alphaTub84B.b | 2133 | alphaTub84B.b | 249..1990 | 1..1742 | 8665 | 99.8 | Plus |
alphaTub84B-RA | 2140 | alphaTub84B-RA | 249..1990 | 1..1742 | 8665 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 2913260..2914866 | 132..1738 | 7990 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 3357325..3358686 | 120..1481 | 5220 | 92.2 | Plus |
chr3R | 27901430 | chr3R | 5557189..5557979 | 1446..656 | 2500 | 87.7 | Minus |
chr3R | 27901430 | chr3R | 5558123..5558618 | 650..155 | 1565 | 87.7 | Minus |
chr3L | 24539361 | chr3L | 9674066..9675112 | 397..1443 | 1245 | 74.6 | Plus |
chr3R | 27901430 | chr3R | 2912640..2912771 | 1..132 | 660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 7087233..7088843 | 132..1742 | 8010 | 99.8 | Plus |
3R | 32079331 | 3R | 7531249..7532610 | 120..1481 | 5220 | 92.2 | Plus |
3R | 32079331 | 3R | 9731362..9732152 | 1446..656 | 2500 | 87.7 | Minus |
3R | 32079331 | 3R | 9732286..9732781 | 650..155 | 1565 | 87.7 | Minus |
3L | 28110227 | 3L | 9682200..9683246 | 397..1443 | 1155 | 74 | Plus |
3R | 32079331 | 3R | 7086613..7086744 | 1..132 | 660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 6828064..6829674 | 132..1742 | 8010 | 99.8 | Plus |
3R | 31820162 | 3R | 7272080..7273441 | 120..1481 | 5220 | 92.2 | Plus |
3R | 31820162 | 3R | 9472193..9472983 | 1446..656 | 2500 | 87.7 | Minus |
3R | 31820162 | 3R | 9473117..9473612 | 650..155 | 1565 | 87.7 | Minus |
3R | 31820162 | 3R | 6827444..6827575 | 1..132 | 660 | 100 | Plus |
3L | 28103327 | 3L | 9675427..9675664 | 524..761 | 455 | 79.4 | Plus |
3L | 28103327 | 3L | 9675906..9676142 | 1003..1239 | 450 | 79.3 | Plus |
3L | 28103327 | 3L | 9676210..9676346 | 1307..1443 | 280 | 80.2 | Plus |
3L | 28103327 | 3L | 9675711..9675870 | 808..967 | 200 | 75 | Plus |
3L | 28103327 | 3L | 9675300..9675371 | 397..468 | 165 | 81.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 2912640..2912771 | 1..132 | 100 | -> | Plus |
chr3R | 2913261..2914866 | 133..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 1..1353 | 130..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 1..1353 | 130..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 1..1353 | 130..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 1..1353 | 130..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 1..1353 | 130..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 76..1813 | 1..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 76..1813 | 1..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 15..1752 | 1..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 76..1813 | 1..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
alphaTub84B-RA | 15..1752 | 1..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7086613..7086744 | 1..132 | 100 | -> | Plus |
3R | 7087234..7088839 | 133..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7086613..7086744 | 1..132 | 100 | -> | Plus |
3R | 7087234..7088839 | 133..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7086613..7086744 | 1..132 | 100 | -> | Plus |
3R | 7087234..7088839 | 133..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 2912335..2912466 | 1..132 | 100 | -> | Plus |
arm_3R | 2912956..2914561 | 133..1738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6828065..6829670 | 133..1738 | 99 | Plus | |
3R | 6827444..6827575 | 1..132 | 100 | -> | Plus |
Translation from 129 to 1481
> AT25469.pep MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFN TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAA NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFT SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDC AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17649-PA | 450 | GF17649-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dana\GF11529-PA | 449 | GF11529-PA | 1..449 | 1..450 | 2262 | 95.8 | Plus |
Dana\GF25153-PA | 462 | GF25153-PA | 1..453 | 1..442 | 1734 | 69.1 | Plus |
Dana\GF16752-PA | 452 | GF16752-PA | 6..451 | 3..443 | 1266 | 52 | Plus |
Dana\GF12605-PA | 447 | GF12605-PA | 1..424 | 1..434 | 903 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13808-PA | 450 | GG13808-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dere\GG14119-PA | 450 | GG14119-PA | 1..450 | 1..450 | 2428 | 99.6 | Plus |
Dere\GG17337-PA | 449 | GG17337-PA | 1..449 | 1..450 | 2255 | 95.3 | Plus |
Dere\GG15399-PA | 462 | GG15399-PA | 1..457 | 1..449 | 1734 | 69.1 | Plus |
Dere\GG22615-PA | 455 | GG22615-PA | 6..436 | 3..435 | 1269 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19001-PA | 450 | GH19001-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dgri\GH22334-PA | 455 | GH22334-PA | 8..454 | 2..448 | 2256 | 95.5 | Plus |
Dgri\GH16316-PA | 460 | GH16316-PA | 1..450 | 1..439 | 1686 | 68.5 | Plus |
Dgri\GH15056-PA | 449 | GH15056-PA | 6..449 | 3..443 | 1216 | 52 | Plus |
Dgri\GH20203-PA | 447 | GH20203-PA | 1..424 | 1..434 | 903 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
alphaTub84B-PA | 450 | CG1913-PA | 1..450 | 1..450 | 2392 | 100 | Plus |
alphaTub84D-PA | 450 | CG2512-PA | 1..450 | 1..450 | 2381 | 99.6 | Plus |
alphaTub85E-PA | 449 | CG9476-PA | 1..449 | 1..450 | 2283 | 95.3 | Plus |
alphaTub67C-PA | 462 | CG8308-PA | 1..456 | 1..445 | 1735 | 69.1 | Plus |
CG7794-PA | 455 | CG7794-PA | 6..436 | 3..435 | 1279 | 53.6 | Plus |
betaTub56D-PB | 447 | CG9277-PB | 1..439 | 1..449 | 949 | 40.1 | Plus |
betaTub97EF-PB | 457 | CG4869-PB | 1..439 | 1..449 | 944 | 39.2 | Plus |
betaTub85D-PA | 446 | CG9359-PA | 1..439 | 1..449 | 932 | 39.6 | Plus |
betaTub97EF-PC | 457 | CG4869-PC | 1..439 | 1..449 | 932 | 39 | Plus |
betaTub60D-PA | 454 | CG3401-PA | 1..439 | 1..443 | 916 | 38.8 | Plus |
betaTub60D-PB | 453 | CG3401-PB | 1..438 | 1..443 | 914 | 38.6 | Plus |
betaTub56D-PA | 456 | CG9277-PA | 30..448 | 21..449 | 905 | 39.6 | Plus |
CG32396-PA | 462 | CG32396-PA | 1..437 | 1..446 | 758 | 34.7 | Plus |
gammaTub23C-PA | 475 | CG3157-PA | 4..441 | 3..433 | 607 | 31.8 | Plus |
gammaTub37C-PB | 457 | CG17566-PB | 4..437 | 3..433 | 589 | 31 | Plus |
gammaTub37C-PA | 457 | CG17566-PA | 4..437 | 3..433 | 589 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23057-PA | 450 | GI23057-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dmoj\GI23620-PA | 414 | GI23620-PA | 1..413 | 36..448 | 2073 | 95.9 | Plus |
Dmoj\GI13261-PA | 461 | GI13261-PA | 1..450 | 1..439 | 1662 | 68 | Plus |
Dmoj\GI23711-PA | 452 | GI23711-PA | 6..435 | 3..435 | 1250 | 52.9 | Plus |
Dmoj\GI20729-PA | 447 | GI20729-PA | 1..424 | 1..434 | 903 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12416-PA | 1216 | GL12416-PA | 768..1216 | 2..450 | 2468 | 100 | Plus |
Dper\GL12714-PA | 464 | GL12714-PA | 1..461 | 1..450 | 1720 | 68.5 | Plus |
Dper\GL12586-PA | 458 | GL12586-PA | 6..458 | 3..448 | 1269 | 51.4 | Plus |
Dper\GL16725-PA | 447 | GL16725-PA | 1..424 | 1..434 | 903 | 40.6 | Plus |
Dper\GL13671-PA | 445 | GL13671-PA | 1..423 | 1..434 | 835 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15128-PA | 450 | GA15128-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dpse\GA20973-PA | 464 | GA20973-PA | 1..461 | 1..450 | 1720 | 68.5 | Plus |
Dpse\GA20592-PA | 458 | GA20592-PA | 6..458 | 3..448 | 1269 | 51.4 | Plus |
Dpse\GA27086-PB | 455 | GA27086-PB | 1..439 | 1..449 | 910 | 39 | Plus |
Dpse\GA27686-PA | 447 | GA27686-PA | 1..424 | 1..434 | 903 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10931-PA | 450 | GM10931-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dsec\GM10965-PA | 450 | GM10965-PA | 1..450 | 1..450 | 2429 | 99.8 | Plus |
Dsec\GM26223-PA | 449 | GM26223-PA | 1..449 | 1..450 | 2255 | 95.3 | Plus |
Dsec\GM25175-PA | 462 | GM25175-PA | 1..457 | 1..449 | 1730 | 68.9 | Plus |
Dsec\GM15273-PA | 455 | GM15273-PA | 6..436 | 3..435 | 1277 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19909-PA | 450 | GD19909-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dsim\GD19940-PA | 450 | GD19940-PA | 1..450 | 1..450 | 2429 | 99.8 | Plus |
Dsim\GD20767-PA | 449 | GD20767-PA | 1..449 | 1..450 | 2255 | 95.3 | Plus |
Dsim\GD14204-PA | 462 | GD14204-PA | 1..457 | 1..449 | 1730 | 68.9 | Plus |
Dsim\GD19196-PA | 455 | GD19196-PA | 6..436 | 3..435 | 1277 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24568-PA | 450 | GJ24568-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dvir\GJ11156-PA | 414 | GJ11156-PA | 1..413 | 36..448 | 2072 | 95.6 | Plus |
Dvir\GJ12031-PA | 460 | GJ12031-PA | 1..450 | 1..439 | 1673 | 68.2 | Plus |
Dvir\GJ23270-PA | 450 | GJ23270-PA | 6..435 | 3..435 | 1269 | 53.6 | Plus |
Dvir\GJ20466-PA | 447 | GJ20466-PA | 1..424 | 1..434 | 903 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12743-PA | 450 | GK12743-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dwil\GK14362-PA | 449 | GK14362-PA | 1..448 | 1..448 | 2363 | 96.9 | Plus |
Dwil\GK16627-PA | 462 | GK16627-PA | 1..446 | 1..435 | 1702 | 70.2 | Plus |
Dwil\GK11238-PA | 456 | GK11238-PA | 6..449 | 3..449 | 1280 | 52.8 | Plus |
Dwil\GK15706-PA | 447 | GK15706-PA | 1..424 | 1..434 | 903 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\alphaTub84B-PA | 450 | GE24900-PA | 1..450 | 1..450 | 2439 | 100 | Plus |
Dyak\GE24934-PA | 450 | GE24934-PA | 1..450 | 1..450 | 2428 | 99.6 | Plus |
Dyak\GE24741-PA | 449 | GE24741-PA | 1..449 | 1..450 | 2255 | 95.3 | Plus |
Dyak\GE20865-PA | 462 | GE20865-PA | 1..457 | 1..449 | 1732 | 69.3 | Plus |
Dyak\GE25507-PA | 455 | GE25507-PA | 6..436 | 3..435 | 1269 | 53.8 | Plus |
Translation from 129 to 1481
> AT25469.hyp MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFN TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAA NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFT SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDC AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
alphaTub84B-PA | 450 | CG1913-PA | 1..450 | 1..450 | 2392 | 100 | Plus |
alphaTub84D-PA | 450 | CG2512-PA | 1..450 | 1..450 | 2381 | 99.6 | Plus |
alphaTub85E-PA | 449 | CG9476-PA | 1..449 | 1..450 | 2283 | 95.3 | Plus |
alphaTub67C-PA | 462 | CG8308-PA | 1..456 | 1..445 | 1735 | 69.1 | Plus |
CG7794-PA | 455 | CG7794-PA | 6..436 | 3..435 | 1279 | 53.6 | Plus |