Clone AT25555 Report

Gene	Date	Evidence
CG13591	2002-01-01	Sim4 clustering to Release 2
CG13591	2002-02-22	Blastp of sequenced clone
CG13591	2003-01-01	Sim4 clustering to Release 3
Ssl	2008-04-29	Release 5.5 accounting
Ssl	2008-08-15	Release 5.9 accounting
Ssl	2008-12-18	5.12 accounting

Clone Sequence Records

AT25555.complete Sequence

795 bp (795 high quality bases) assembled on 2002-02-22

GenBank Submission: AY089437

> AT25555.complete
CTTTTTCATTATATTTTATTCGAGTGAGCATGTCGTGTCCCAGGAGCATC
GAGATACCAGATGGCAGTTGGATCGATTGGTTCCTGGGAATCAAGGGCCA
CGAATTCTCCTGCCGGGTGCCCAATGAATACATCCAGGACAAGTTCAATC
TGACGGGCCTGGAGTTCGATAGCCAGACACTGGAGGTAGTCTTAGATCCG
GAGTTCGACAACGAGGACTGGGACTGCGCCGAAGAGAAGAAGCTGTATGG
CATGATCCATGCACGGTACATCGTTTCGCCGCGTGGCATTGAAGATATGC
GATTAAAGTACGAAAGGGGGGACTTCGGATCGTGTCCGAGAGTCTTTTGT
AAGAGGCAGAAAGTCCTGCCAGTGGGCCTTCACGACGTGTGGGACAAGGC
CCAAGTTAAGATCTATTGCCCTAGCTGTAACAACGTCTACATCCCGCTAC
CCCACAATGGAATGCTGGACGGAGCCATGTTCGGGACCAGCTTCCCGCAT
ATGTTCTTTATGCAGCTGCCGAGCTTGATACCCTCTCCGCCCGTGGAGAA
GTACATCCCCCGTATCTATGGCTTCCAGTTGCACAAGAAGGCCCTGATGC
CGCCCGAATCAGCAGAGTCCCCGCCAATAAAGGTCGAATCCTCGGTCAGC
AAGTCCCCCTCCTGGCTAAGGAATGTCCCGAATTTTTAACTCCACACGAA
CAAAGCACACAAATGTTGGTTTGGTCTGTTGTTGCAATTAAACAGTTTCC
CCATATCAAGCAGTCATTCGAAAAGCAAAAAAAAAAAAAAAAAAA

AT25555.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:26:45

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Ssl-RA	1007	Ssl-RA	47..799	1..753	3735	99.7	Plus
SteXh:CG42398-RA	645	SteXh:CG42398-RA	84..185	64..165	225	81.3	Plus
Ste:CG33237-RB	607	Ste:CG33237-RB	56..157	64..165	210	80.3	Plus
SteXh:CG42398-RA	645	SteXh:CG42398-RA	484..548	464..528	175	84.6	Plus
Ste:CG33237-RB	607	Ste:CG33237-RB	456..520	464..528	175	84.6	Plus
Ssl-RA	1007	Ssl-RA	883..911	751..779	145	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:42:11

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr2R	21145070	chr2R	20385500..20386021	562..41	2595	99.8	Minus
chr2R	21145070	chr2R	20385249..20385440	753..562	960	100	Minus
chrU	10048995	chrU	9446346..9446572	561..332	365	78.3	Minus
chrU	10048995	chrU	5694601..5694828	332..562	355	77.9	Plus
chrU	10048995	chrU	8945516..8945691	533..348	325	79.6	Minus
chrU	10048995	chrU	5694921..5695159	321..562	320	76.4	Plus
chrU	10048995	chrU	9384474..9384928	533..59	320	72.6	Minus
chrU	10048995	chrU	5694324..5694498	385..562	315	79.8	Plus
chrU	10048995	chrU	9446728..9446901	562..386	310	79.7	Minus
chrU	10048995	chrU	9521514..9521689	348..533	310	79	Plus
chrU	10048995	chrU	9025297..9025669	434..64	300	73.3	Minus
chrU	10048995	chrU	4296376..4296545	533..354	295	78.9	Minus
chrU	10048995	chrU	4304771..4304946	533..348	295	78.5	Minus
chrU	10048995	chrU	7059633..7060068	78..533	285	72.3	Plus
chrU	10048995	chrU	4292293..4292660	438..59	280	73.4	Minus
chrU	10048995	chrU	9970512..9970686	532..348	275	77.8	Minus
chrU	10048995	chrU	5414449..5414821	64..434	270	72.7	Plus
chrU	10048995	chrU	6389532..6389904	64..434	270	72.7	Plus
chrU	10048995	chrU	7243210..7243582	434..64	270	72.7	Minus
chrU	10048995	chrU	7568193..7568565	434..64	270	72.7	Minus
chrU	10048995	chrU	8876086..8876458	434..64	270	72.7	Minus
chrU	10048995	chrU	9818481..9818853	64..434	270	72.7	Plus
chrU	10048995	chrU	6162295..6162666	434..65	265	72.7	Minus
chrU	10048995	chrU	7917412..7917587	533..348	265	77.4	Minus
chrU	10048995	chrU	5025831..5026200	438..59	255	72.3	Minus
chrU	10048995	chrU	5759613..5759759	210..64	255	78.2	Minus
chrU	10048995	chrU	8491358..8491730	64..434	255	72.5	Plus
chrU	10048995	chrU	8500405..8500777	434..64	255	72.5	Minus
chrU	10048995	chrU	8733504..8733572	533..465	255	91.3	Minus
chrU	10048995	chrU	4294385..4294560	533..348	250	76.9	Minus
chrU	10048995	chrU	6276003..6276123	184..64	245	80.2	Minus
chrU	10048995	chrU	9009299..9009630	393..64	245	73	Minus
chrU	10048995	chrU	9998604..9998724	64..184	245	80.2	Plus
chrU	10048995	chrU	6755079..6755451	434..64	240	72.2	Minus
chrU	10048995	chrU	8078245..8078617	434..64	240	72.2	Minus
chrU	10048995	chrU	6404837..6404957	64..184	230	79.3	Plus
chrU	10048995	chrU	9952453..9952784	393..64	230	72.7	Minus
chrU	10048995	chrU	7863056..7863157	64..165	225	81.4	Plus
chrU	10048995	chrU	8929364..8929432	533..465	225	88.4	Minus
chrU	10048995	chrU	4584285..4584386	165..64	225	81.4	Minus
chrU	10048995	chrU	6621582..6621683	64..165	225	81.4	Plus
chrU	10048995	chrU	7044913..7045014	165..64	225	81.4	Minus
chrU	10048995	chrU	7175038..7175410	64..434	225	71.9	Plus
chrU	10048995	chrU	9363741..9363972	287..59	225	74.1	Minus
chrU	10048995	chrU	8043127..8043495	68..434	220	71.9	Plus
chrU	10048995	chrU	9272504..9272604	65..165	220	81.2	Plus
chrU	10048995	chrU	2888406..2888538	191..59	215	77.4	Minus
chrU	10048995	chrU	7084187..7084253	532..466	215	88.1	Minus
chrU	10048995	chrU	8763337..8763436	64..163	215	81	Plus
chrU	10048995	chrU	5029620..5029745	184..59	210	77.8	Minus
chrU	10048995	chrU	8675320..8675421	64..165	210	80.4	Plus
chrU	10048995	chrU	8685692..8685793	165..64	210	80.4	Minus
chrX	22417052	chrX	13948038..13948139	165..64	210	80.4	Minus
chrX	22417052	chrX	13949307..13949408	165..64	210	80.4	Minus
chrX	22417052	chrX	13950577..13950678	165..64	210	80.4	Minus
chrX	22417052	chrX	13951845..13951946	165..64	210	80.4	Minus
chrX	22417052	chrX	13945500..13945601	165..64	210	80.4	Minus
chrX	22417052	chrX	13946769..13946870	165..64	210	80.4	Minus
chrX	22417052	chrX	13890883..13890984	64..165	210	80.4	Plus
chrX	22417052	chrX	13937915..13938016	165..64	210	80.4	Minus
chrX	22417052	chrX	13939154..13939255	165..64	210	80.4	Minus
chrX	22417052	chrX	13940423..13940524	165..64	210	80.4	Minus
chrX	22417052	chrX	13941692..13941793	165..64	210	80.4	Minus
chrX	22417052	chrX	13942961..13943062	165..64	210	80.4	Minus
chr2R	21145070	chr2R	20386079..20386118	40..1	200	100	Minus
chrX	22417052	chrX	13944230..13944332	165..64	180	80.6	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 15:58:47

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Su(Ste):CR42422-RA	1339	CR42422-RA	192..337	64..210	230	78.2	Plus
Su(Ste):CR42412-RA	1362	CR42412-RA	187..307	64..184	230	79.3	Plus
Su(Ste):CR42411-RA	1189	CR42411-RA	154..299	64..210	215	77.5	Plus
Su(Ste):CR42422-RA	1339	CR42422-RA	451..564	321..434	165	76.3	Plus
Su(Ste):CR42411-RA	1189	CR42411-RA	552..611	473..532	165	85	Plus
Su(Ste):CR42422-RA	1339	CR42422-RA	590..645	473..528	160	85.7	Plus
Su(Ste):CR42411-RA	1189	CR42411-RA	413..526	321..434	150	75.4	Plus
Su(Ste):CR42412-RA	1362	CR42412-RA	549..608	473..532	150	83.3	Plus
Su(Ste):CR42412-RA	1362	CR42412-RA	411..520	321..430	145	75.4	Plus

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:42:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25286936	2R	24499603..24500124	562..41	2595	99.8	Minus
2R	25286936	2R	24499352..24499543	753..562	945	99.5	Minus
U	3151297	U	827697..827923	561..332	365	78.3	Minus
U	3151297	U	2799521..2799748	332..562	355	77.9	Plus
Ymm	880023	Ymm	679391..679566	533..348	325	79.6	Minus
U	3151297	U	2799841..2800079	321..562	320	76.4	Plus
Ymm	880023	Ymm	669241..669695	533..59	320	72.6	Minus
U	3151297	U	2799244..2799418	385..562	315	79.8	Plus
U	3151297	U	828079..828252	562..386	310	79.7	Minus
Ymm	880023	Ymm	761189..761364	348..533	310	79	Plus
Ymm	880023	Ymm	568419..568791	434..64	300	73.3	Minus
Y	3667352	Y	846180..846552	64..434	300	73.3	Plus
Y	3667352	Y	847951..848323	64..434	300	73.3	Plus
Y	3667352	Y	2535261..2535633	64..434	300	73.3	Plus
Y	3667352	Y	2540992..2541364	64..434	300	73.3	Plus
Y	3667352	Y	2543861..2544233	64..434	300	73.3	Plus
Y	3667352	Y	2546388..2546760	64..434	300	73.3	Plus
Y	3667352	Y	2548916..2549288	64..434	300	73.3	Plus
Y	3667352	Y	2551785..2552157	64..434	300	73.3	Plus
Y	3667352	Y	2554654..2555026	64..434	300	73.3	Plus
Y	3667352	Y	2559995..2560367	64..434	300	73.3	Plus
Y	3667352	Y	2562865..2563237	64..434	300	73.3	Plus
Y	3667352	Y	2565704..2566076	64..434	300	73.3	Plus
Y	3667352	Y	2568543..2568915	64..434	300	73.3	Plus
Y	3667352	Y	2571382..2571754	64..434	300	73.3	Plus
Y	3667352	Y	2577058..2577430	64..434	300	73.3	Plus
Y	3667352	Y	2579898..2580270	64..434	300	73.3	Plus
Y	3667352	Y	2582730..2583102	64..434	300	73.3	Plus
Y	3667352	Y	2585591..2585963	64..434	300	73.3	Plus
Y	3667352	Y	2590941..2591313	64..434	300	73.3	Plus
Y	3667352	Y	2593811..2594183	64..434	300	73.3	Plus
Y	3667352	Y	2596650..2597022	64..434	300	73.3	Plus
Ymm	880023	Ymm	415431..415600	533..354	295	78.9	Minus
Ymm	880023	Ymm	424354..424529	533..348	295	78.5	Minus
U	3151297	U	2889733..2890168	78..533	285	72.3	Plus
Y	3667352	Y	912812..913184	64..434	285	73	Plus
Y	3667352	Y	2520914..2521286	64..434	285	73	Plus
Y	3667352	Y	2523789..2524161	64..434	285	73	Plus
Y	3667352	Y	2526672..2527044	64..434	285	73	Plus
Y	3667352	Y	2529555..2529927	64..434	285	73	Plus
Y	3667352	Y	2532388..2532760	64..434	285	73	Plus
Y	3667352	Y	2538123..2538495	64..434	285	73	Plus
Ymm	880023	Ymm	411348..411715	438..59	280	73.4	Minus
Y	3667352	Y	876841..877209	64..430	280	73	Plus
Y	3667352	Y	2557523..2557882	64..421	280	73.1	Plus
Y	3667352	Y	2588469..2588828	64..421	280	73.1	Plus
Ymm	880023	Ymm	637598..637772	532..348	275	77.8	Minus
Ymm	880023	Ymm	683596..683968	434..64	270	72.7	Minus
Ymm	880023	Ymm	717784..718156	64..434	270	72.7	Plus
Ymm	880023	Ymm	829102..829474	64..434	270	72.7	Plus
Y	3667352	Y	847201..847573	64..434	270	72.7	Plus
Y	3667352	Y	851751..852123	434..64	270	72.7	Minus
Y	3667352	Y	854923..855295	64..434	270	72.7	Plus
Y	3667352	Y	870667..871039	434..64	270	72.7	Minus
Y	3667352	Y	872690..873062	434..64	270	72.7	Minus
Y	3667352	Y	881085..881457	64..434	270	72.7	Plus
Y	3667352	Y	905119..905491	434..64	270	72.7	Minus
Y	3667352	Y	949424..949796	64..434	270	72.7	Plus
Y	3667352	Y	1000738..1001110	434..64	270	72.7	Minus
Y	3667352	Y	2503998..2504370	64..434	270	72.7	Plus
Y	3667352	Y	2506867..2507239	64..434	270	72.7	Plus
Y	3667352	Y	2509721..2510093	64..434	270	72.7	Plus
Y	3667352	Y	2515169..2515541	64..434	270	72.7	Plus
Y	3667352	Y	2518036..2518408	64..434	270	72.7	Plus
Ymm	880023	Ymm	835858..836229	434..65	265	72.7	Minus
Y	3667352	Y	1008103..1008474	65..434	265	72.7	Plus
Ymm	880023	Ymm	159465..159834	59..438	255	72.3	Plus
Ymm	880023	Ymm	677760..677828	533..465	255	91.3	Minus
Y	3667352	Y	893865..894011	210..64	255	78.2	Minus
Y	3667352	Y	910254..910626	434..64	255	72.5	Minus
Y	3667352	Y	932282..932654	64..434	255	72.5	Plus
Ymm	880023	Ymm	155775..156029	59..310	250	74.1	Plus
Ymm	880023	Ymm	413440..413615	533..348	250	76.9	Minus
Ymm	880023	Ymm	711004..711124	64..184	245	80.2	Plus
Y	3667352	Y	954004..954124	184..64	245	80.2	Minus
U	3151297	U	1942917..1942985	533..465	225	88.4	Minus
Ymm	880023	Ymm	560498..560729	287..59	225	74.1	Minus
Xmm	1049845	Xmm	581799..581900	64..165	225	81.4	Plus
X	23542271	X	23317196..23317297	165..64	225	81.4	Minus
X	23542271	X	23352530..23352631	165..64	225	81.4	Minus
2CEN	225573	2CEN	194169..194270	165..64	225	81.4	Minus
Ymm	880023	Ymm	409253..409619	438..59	215	72.8	Minus
Ymm	880023	Ymm	514678..514744	532..466	215	88.1	Minus
Ymm	880023	Ymm	563133..563373	64..301	210	73.4	Plus
X	23542271	X	14051059..14051160	165..64	210	80.4	Minus
X	23542271	X	14052328..14052429	165..64	210	80.4	Minus
X	23542271	X	14054867..14054968	165..64	210	80.4	Minus
X	23542271	X	14056136..14056237	165..64	210	80.4	Minus
X	23542271	X	14057405..14057506	165..64	210	80.4	Minus
X	23542271	X	14058674..14058775	165..64	210	80.4	Minus
X	23542271	X	14059944..14060045	165..64	210	80.4	Minus
X	23542271	X	14061212..14061313	165..64	210	80.4	Minus
X	23542271	X	23346572..23346673	165..64	210	80.4	Minus
X	23542271	X	14000292..14000393	64..165	210	80.4	Plus
X	23542271	X	14047282..14047383	165..64	210	80.4	Minus
X	23542271	X	14048521..14048622	165..64	210	80.4	Minus
X	23542271	X	14049790..14049891	165..64	210	80.4	Minus
2R	25286936	2R	24500182..24500221	40..1	200	100	Minus
U	3151297	U	2792304..2792454	209..59	200	75.5	Minus
Ymm	880023	Ymm	504134..504284	508..348	200	76.4	Minus
Ymm	880023	Ymm	533379..533422	508..465	190	95.5	Minus
3CEN	744266	3CEN	409235..409292	533..476	185	87.9	Minus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:55:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25260384	2R	24500802..24501323	562..41	2595	99.8	Minus
2R	25260384	2R	24500551..24500742	753..562	945	99.4	Minus
Unimproved_211000022278072_186_779	593	Unimproved_211000022278072_186_779	235..332	561..464	280	85.7	Minus
Y	3410481	Y	1589699..1589845	210..64	255	78.2	Minus
Unmapped_scaffold_30	25805	Unmapped_scaffold_30	22575..22643	533..465	255	91.3	Minus
Unmapped_scaffold_30	25805	Unmapped_scaffold_30	13652..13720	533..465	255	91.3	Minus
Unimproved_211000022253157_57_583	526	Unimproved_211000022253157_57_583	338..406	533..465	255	91.3	Minus
Unimproved_211000022279491_149_1220	1071	Unimproved_211000022279491_149_1220	127..195	533..465	255	91.3	Minus
Unimproved_211000022256286_21_647	626	Unimproved_211000022256286_21_647	192..260	465..533	255	91.3	Plus
Y	3410481	Y	1713359..1713479	184..64	245	80.1	Minus
Y	3410481	Y	1649838..1649958	184..64	245	80.1	Minus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	149141..149261	64..184	245	80.1	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	163378..163498	64..184	245	80.1	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	16354..16504	64..215	240	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	133904..134054	64..215	240	78.2	Plus
Y	3410481	Y	1680534..1680654	64..184	230	79.3	Plus
Y	3410481	Y	1608646..1608791	64..210	230	78.2	Plus
Y	3410481	Y	1543785..1543930	64..210	230	78.2	Plus
Y	3410481	Y	1542014..1542159	64..210	230	78.2	Plus
Y	3410481	Y	1572675..1572820	64..210	230	78.2	Plus
Y	3410481	Y	1576919..1577064	64..210	230	78.2	Plus
Y	3410481	Y	1566728..1566873	210..64	230	78.2	Minus
Y	3410481	Y	1601180..1601325	210..64	230	78.2	Minus
Y	3410481	Y	1600001..1600146	210..64	230	78.2	Minus
Y	3410481	Y	1727123..1727268	210..64	230	78.2	Minus
Y	3410481	Y	1547812..1547957	210..64	230	78.2	Minus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	100430..100575	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	97591..97736	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	94721..94866	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	92249..92394	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	89371..89516	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	86510..86655	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	83678..83823	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	80838..80983	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	75162..75307	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	72323..72468	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	69484..69629	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	66645..66790	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	63775..63920	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	61303..61448	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	58434..58579	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	55565..55710	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	52696..52841	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	50168..50313	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	47641..47786	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	44772..44917	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	39041..39186	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	18949..19094	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	13501..13646	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	10647..10792	64..210	230	78.2	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	7778..7923	64..210	230	78.2	Plus
Y	3410481	Y	1637192..1637293	64..165	225	81.3	Plus
Y	3410481	Y	1626557..1626658	64..165	225	81.3	Plus
Y	3410481	Y	1568795..1568896	165..64	225	81.3	Minus
Y	3410481	Y	3195498..3195599	165..64	225	81.3	Minus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	168825..168926	64..165	225	81.3	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	41903..42004	64..165	225	81.3	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	103850..103951	64..165	225	81.3	Plus
X	23527363	X	23337622..23337723	165..64	225	81.3	Minus
X	23527363	X	23302288..23302389	165..64	225	81.3	Minus
Y	3410481	Y	1558019..1558119	65..165	220	81.1	Plus
Y	3410481	Y	1671481..1671550	533..465	220	90	Minus
Unimproved_211000022278072_186_779	593	Unimproved_211000022278072_186_779	355..461	438..332	220	80.3	Minus
Y	3410481	Y	1603812..1603957	64..210	215	77.5	Plus
Y	3410481	Y	1550757..1550902	64..210	215	77.5	Plus
Y	3410481	Y	1543035..1543180	64..210	215	77.5	Plus
Y	3410481	Y	1574901..1575046	64..210	215	77.5	Plus
Y	3410481	Y	1628116..1628261	64..210	215	77.5	Plus
Y	3410481	Y	1645258..1645403	64..210	215	77.5	Plus
Y	3410481	Y	1610424..1610569	64..210	215	77.5	Plus
Y	3410481	Y	1562419..1562485	532..466	215	88	Minus
Y	3410481	Y	1569910..1570055	210..64	215	77.5	Minus
Y	3410481	Y	1696799..1696944	210..64	215	77.5	Minus
Y	3410481	Y	1555754..1555899	210..64	215	77.5	Minus
Y	3410481	Y	1548911..1549056	210..64	215	77.5	Minus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	36168..36313	64..210	215	77.5	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	33335..33480	64..210	215	77.5	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	30452..30597	64..210	215	77.5	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	27569..27714	64..210	215	77.5	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	24694..24839	64..210	215	77.5	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	115549..115681	59..191	215	77.4	Plus
Unmapped_scaffold_12	66439	Unmapped_scaffold_12	19443..19593	59..209	215	76.1	Plus
Unmapped_scaffold_12	66439	Unmapped_scaffold_12	15753..15903	59..209	215	76.1	Plus
Y	3410481	Y	1615787..1615888	64..165	210	80.3	Plus
Y	3410481	Y	1729851..1729997	64..210	210	76.1	Plus
Y	3410481	Y	1621055..1621156	165..64	210	80.3	Minus
X	23527363	X	14008390..14008491	64..165	210	80.3	Plus
X	23527363	X	23331664..23331765	165..64	210	80.3	Minus
X	23527363	X	14069310..14069411	165..64	210	80.3	Minus
X	23527363	X	14068042..14068143	165..64	210	80.3	Minus
X	23527363	X	14065503..14065604	165..64	210	80.3	Minus
X	23527363	X	14064234..14064335	165..64	210	80.3	Minus
X	23527363	X	14062965..14063066	165..64	210	80.3	Minus
X	23527363	X	14060426..14060527	165..64	210	80.3	Minus
X	23527363	X	14059157..14059258	165..64	210	80.3	Minus
X	23527363	X	14057888..14057989	165..64	210	80.3	Minus
X	23527363	X	14056619..14056720	165..64	210	80.3	Minus
X	23527363	X	14055380..14055481	165..64	210	80.3	Minus
X	23527363	X	14066772..14066873	165..64	210	80.3	Minus
Unmapped_scaffold_30	25805	Unmapped_scaffold_30	11661..11729	533..465	210	86.9	Minus
Unimproved_211000022253157_57_583	526	Unimproved_211000022253157_57_583	412..513	449..348	210	80.3	Minus
Unimproved_211000022279491_149_1220	1071	Unimproved_211000022279491_149_1220	201..302	449..348	210	80.3	Minus
Y	3410481	Y	1563482..1563627	64..210	200	76.8	Plus
Y	3410481	Y	1583023..1583168	210..64	200	76.8	Minus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	21816..21961	64..210	200	76.8	Plus
2R	25260384	2R	24501381..24501420	40..1	200	100	Minus
Unmapped_scaffold_30	25805	Unmapped_scaffold_30	9569..9659	438..348	200	81.3	Minus
Unmapped_scaffold_30	25805	Unmapped_scaffold_30	7474..7564	438..348	200	81.3	Minus
Unimproved_211000022256286_21_647	626	Unimproved_211000022256286_21_647	85..175	348..438	200	81.3	Plus
Y	3410481	Y	1703937..1704081	65..210	195	76.7	Plus
Y	3410481	Y	1576081..1576221	69..210	190	76.7	Plus
Y	3410481	Y	1564578..1564678	164..64	190	79.2	Minus
Y	3410481	Y	1624508..1624653	64..210	185	76.1	Plus
Y	3410481	Y	1581171..1581375	434..230	185	72.6	Minus
Y	3410481	Y	1613320..1613465	210..64	185	76.1	Minus
Y	3410481	Y	1606315..1606460	210..64	185	76.1	Minus
Unmapped_scaffold_30	25805	Unmapped_scaffold_30	13737..13821	438..354	185	81.1	Minus
Unmapped_scaffold_30	25805	Unmapped_scaffold_30	22660..22750	438..348	185	80.2	Minus
Unmapped_scaffold_30	25805	Unmapped_scaffold_30	11746..11836	438..348	185	80.2	Minus
Unmapped_scaffold_12	66439	Unmapped_scaffold_12	19731..19812	357..438	185	81.7	Plus
Y	3410481	Y	1642423..1642536	321..434	180	77.1	Plus
Y	3410481	Y	1683103..1683216	434..321	180	77.1	Minus
X	23527363	X	14055017..14055081	528..464	175	84.6	Minus
X	23527363	X	23337259..23337323	528..464	175	84.6	Minus
X	23527363	X	23301925..23301989	528..464	175	84.6	Minus
X	23527363	X	23324143..23324207	528..464	175	84.6	Minus
X	23527363	X	14067679..14067743	528..464	175	84.6	Minus
X	23527363	X	14056256..14056320	528..464	175	84.6	Minus
Y	3410481	Y	1608814..1609018	230..434	170	72.1	Plus
Y	3410481	Y	1550925..1551129	230..434	170	72.1	Plus
Y	3410481	Y	1568524..1568728	434..230	170	72.1	Minus
Y	3410481	Y	1671567..1671657	438..348	170	79.1	Minus
Y	3410481	Y	1616185..1616244	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	89769..89828	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	86908..86967	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	84076..84135	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	81236..81295	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	33733..33792	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	22214..22273	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	24953..25066	321..434	165	76.3	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	22075..22188	321..434	165	76.3	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	100828..100887	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	97989..98048	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	95119..95178	473..532	165	85	Plus
Unmapped_scaffold_03	170808	Unmapped_scaffold_03	92621..92680	473..532	165	85	Plus
X	23527363	X	14008790..14008854	464..528	160	83	Plus
X	23527363	X	14068947..14069011	528..464	160	83	Minus
X	23527363	X	14066409..14066473	528..464	160	83	Minus
X	23527363	X	14065140..14065204	528..464	160	83	Minus
X	23527363	X	14063871..14063935	528..464	160	83	Minus
X	23527363	X	14062602..14062666	528..464	160	83	Minus
X	23527363	X	14061332..14061396	528..464	160	83	Minus
X	23527363	X	14060063..14060127	528..464	160	83	Minus
X	23527363	X	14058794..14058858	528..464	160	83	Minus
X	23527363	X	14057525..14057589	528..464	160	83	Minus
2R	25260384	2R	24500439..24500467	779..751	145	100	Minus

Blast to na_te.dros performed on 2019-03-16 18:42:09 has no hits.

AT25555.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:42:48 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr2R	20385140..20385159	757..776	100	<-	Minus
chr2R	20385245..20385439	563..756	98	<-	Minus
chr2R	20385500..20386021	41..562	99	<-	Minus
chr2R	20386079..20386118	1..40	100		Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:21:34 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RB	1..660	30..689	99		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:41:10 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RA	1..660	30..689	99		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:24:33 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RA	1..660	30..689	99		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:10:29 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RB	1..660	30..689	99		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:47:31 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RA	1..660	30..689	99		Plus

Sim4 to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:58:48 has no hits.

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:06:02 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RB	11..783	1..776	99		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:41:10 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RA	11..767	1..756	99	->	Plus
Ssl-RA	853..872	757..776	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:24:33 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RA	47..803	1..756	99	->	Plus
Ssl-RA	889..908	757..776	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:10:29 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RB	11..783	1..776	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:47:31 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ssl-RA	47..803	1..756	99	->	Plus
Ssl-RA	889..908	757..776	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:42:48 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	24499243..24499262	757..776	100	<-	Minus
2R	24499348..24499542	563..756	97	<-	Minus
2R	24499603..24500124	41..562	99	<-	Minus
2R	24500182..24500221	1..40	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:42:48 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	24499243..24499262	757..776	100	<-	Minus
2R	24499348..24499542	563..756	97	<-	Minus
2R	24499603..24500124	41..562	99	<-	Minus
2R	24500182..24500221	1..40	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:42:48 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	24499243..24499262	757..776	100	<-	Minus
2R	24499348..24499542	563..756	97	<-	Minus
2R	24499603..24500124	41..562	99	<-	Minus
2R	24500182..24500221	1..40	100		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:33 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_2R	20386766..20386785	757..776	100	<-	Minus
arm_2R	20386871..20387065	563..756	97	<-	Minus
arm_2R	20387126..20387647	41..562	99	<-	Minus
arm_2R	20387705..20387744	1..40	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:44:49 Download gff for AT25555.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	24500820..24501341	41..562	99	<-	Minus
2R	24501399..24501438	1..40	100		Minus
2R	24500460..24500479	757..776	100	<-	Minus
2R	24500565..24500759	563..756	97	<-	Minus

AT25555.hyp Sequence

Translation from 2 to 688

> AT25555.hyp
FSLYFIRVSMSCPRSIEIPDGSWIDWFLGIKGHEFSCRVPNEYIQDKFNL
TGLEFDSQTLEVVLDPEFDNEDWDCAEEKKLYGMIHARYIVSPRGIEDMR
LKYERGDFGSCPRVFCKRQKVLPVGLHDVWDKAQVKIYCPSCNNVYIPLP
HNGMLDGAMFGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHKKALMP
PESAESPPIKVESSVSKSPSWLRNVPNF*

AT25555.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:15:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Ssl-PA	219	CG13591-PA	1..219	10..228	1210	100	Plus
SteXh:CG42398-PA	172	CG42398-PA	8..163	20..175	471	58	Plus
CkIIbeta2-PA	219	CG8914-PA	6..194	20..197	469	49.7	Plus
Ste:CG33238-PB	172	CG33238-PB	3..163	15..175	468	56.2	Plus
Ste:CG33241-PB	172	CG33241-PB	8..163	20..175	464	56.7	Plus

AT25555.pep Sequence

Translation from 29 to 688

> AT25555.pep
MSCPRSIEIPDGSWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGLEFDSQT
LEVVLDPEFDNEDWDCAEEKKLYGMIHARYIVSPRGIEDMRLKYERGDFG
SCPRVFCKRQKVLPVGLHDVWDKAQVKIYCPSCNNVYIPLPHNGMLDGAM
FGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHKKALMPPESAESPPI
KVESSVSKSPSWLRNVPNF*

AT25555.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:41:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF11247-PA	245	GF11247-PA	6..208	2..196	675	59.1	Plus
Dana\GF20435-PA	235	GF20435-PA	8..196	13..188	457	49.2	Plus
Dana\GF12259-PA	216	GF12259-PA	6..194	11..188	449	47.2	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:41:38

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG19923-PA	236	GG19923-PA	12..222	11..217	797	67.3	Plus
Dere\GG18445-PA	246	GG18445-PA	19..207	13..188	459	49.2	Plus
Dere\GG22024-PA	219	GG22024-PA	6..194	11..188	436	44.6	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:41:38

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH22749-PA	247	GH22749-PA	15..226	7..209	561	51.4	Plus
Dgri\GH20876-PA	335	GH20876-PA	1..183	7..178	514	55.4	Plus
Dgri\GH12745-PA	236	GH12745-PA	8..196	13..188	458	49.2	Plus
Dgri\GH21823-PA	217	GH21823-PA	8..197	13..191	433	44.8	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:18

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Ssl-PA	219	CG13591-PA	1..219	1..219	1210	100	Plus
SteXh:CG42398-PA	172	CG42398-PA	8..163	11..166	471	58	Plus
CkIIbeta2-PA	219	CG8914-PA	6..194	11..188	469	49.7	Plus
Ste:CG33238-PB	172	CG33238-PB	3..163	6..166	468	56.2	Plus
Ste:CG33241-PB	172	CG33241-PB	8..163	11..166	464	56.7	Plus
Ste:CG33239-PB	172	CG33239-PB	8..163	11..166	464	56.7	Plus
CkIIbeta-PH	215	CG15224-PH	8..196	13..188	464	49.2	Plus
CkIIbeta-PG	215	CG15224-PG	8..196	13..188	464	49.2	Plus
CkIIbeta-PD	215	CG15224-PD	8..196	13..188	464	49.2	Plus
CkIIbeta-PC	215	CG15224-PC	8..196	13..188	464	49.2	Plus
CkIIbeta-PF	215	CG15224-PF	8..196	13..188	464	49.2	Plus
CkIIbeta-PB	215	CG15224-PB	8..196	13..188	464	49.2	Plus
CkIIbeta-PJ	233	CG15224-PJ	8..196	13..188	464	49.2	Plus
CkIIbeta-PI	233	CG15224-PI	8..196	13..188	464	49.2	Plus
CkIIbeta-PK	234	CG15224-PK	8..196	13..188	464	49.2	Plus
CkIIbeta-PE	235	CG15224-PE	8..196	13..188	464	49.2	Plus
Ste:CG33245-PB	172	CG33245-PB	8..163	11..166	463	56.7	Plus
Ste:CG33244-PB	172	CG33244-PB	8..163	11..166	463	56.7	Plus
Ste:CG33240-PB	172	CG33240-PB	8..163	11..166	463	56.7	Plus
Ste:CG33236-PB	172	CG33236-PB	8..163	11..166	463	56.7	Plus
Ste:CG33243-PB	172	CG33243-PB	8..163	11..166	462	56.7	Plus
Ste:CG33237-PB	172	CG33237-PB	8..163	11..166	462	56.7	Plus
Ste12DOR-PB	172	CG32616-PB	8..163	11..166	461	56.1	Plus
Ste:CG33247-PB	172	CG33247-PB	8..163	11..166	459	56.1	Plus
Ste:CG33246-PB	172	CG33246-PB	8..163	11..166	457	56.1	Plus
Ste:CG33242-PB	171	CG33242-PB	16..162	20..166	395	53.4	Plus
CG40635-PB	88	CG40635-PB	10..88	9..86	252	65.8	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:41:39

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI20990-PA	248	GI20990-PA	5..204	11..197	601	58	Plus
Dmoj\GI18532-PA	265	GI18532-PA	5..209	6..201	576	58.7	Plus
Dmoj\GI15890-PA	236	GI15890-PA	8..196	13..188	458	49.2	Plus
Dmoj\GI20794-PA	216	GI20794-PA	6..195	11..189	442	46.4	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:41:39

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL20424-PA	205	GL20424-PA	3..191	11..191	527	52.9	Plus
Dper\GL17632-PA	211	GL17632-PA	8..207	13..201	436	45	Plus
Dper\GL19762-PA	208	GL19762-PA	3..191	8..185	418	46	Plus
Dper\GL20197-PA	242	GL20197-PA	8..124	13..117	288	50.4	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:41:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA25112-PA	205	GA25112-PA	3..191	11..191	521	52.9	Plus
Dpse\GA21406-PA	211	GA21406-PA	8..207	13..201	436	45	Plus
Dpse\GA27055-PA	208	GA27055-PA	8..191	13..185	417	46.7	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:41:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM11826-PA	219	GM11826-PA	1..209	1..209	789	74.2	Plus
Dsec\GM17556-PA	226	GM17556-PA	1..199	1..197	676	62.8	Plus
Dsec\GM17552-PA	226	GM17552-PA	1..199	1..197	667	62.3	Plus
Dsec\GM17557-PA	332	GM17557-PA	130..328	11..209	663	62.5	Plus
Dsec\GM17570-PA	198	GM17570-PA	1..197	1..196	602	59.1	Plus
Dsec\GM17557-PA	332	GM17557-PA	1..121	1..119	401	65.3	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:41:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD24508-PA	223	GD24508-PA	1..199	1..197	657	61.3	Plus
Dsim\GD24510-PA	196	GD24510-PA	3..192	13..209	613	61.1	Plus
Dsim\GD15860-PA	194	GD15860-PA	12..192	11..191	605	62.1	Plus
Dsim\GD20851-PA	194	GD20851-PA	1..192	1..191	598	59.6	Plus
Dsim\CkIIbeta2-PA	219	GD11505-PA	6..194	11..188	457	48.7	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:41:42

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ21399-PA	241	GJ21399-PA	1..199	9..197	620	57.8	Plus
Dvir\GJ20708-PA	296	GJ20708-PA	4..182	10..178	543	57	Plus
Dvir\GJ16637-PA	236	GJ16637-PA	8..196	13..188	458	49.2	Plus
Dvir\GJ20529-PA	212	GJ20529-PA	6..194	11..188	445	46.6	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:41:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK19682-PA	244	GK19682-PA	15..228	9..211	612	52.5	Plus
Dwil\GK14838-PA	238	GK14838-PA	8..196	13..188	458	49.2	Plus
Dwil\GK19625-PA	212	GK19625-PA	6..197	11..191	451	46.9	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:41:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE11447-PA	236	GE11447-PA	1..223	1..218	767	64.6	Plus
Dyak\GE15667-PA	246	GE15667-PA	19..207	13..188	459	49.2	Plus
Dyak\GE12102-PA	217	GE12102-PA	6..194	11..188	439	46.2	Plus

Library:	AT
Tissue Source:	Drosophila melanogaster adult testes
Created by:	Ling Hong
Date Registered:	2000-06-08
Comments:	Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:	255
Well:	55
Vector:	pOTB7
Associated Gene/Transcript	Ssl-RA
Protein status:	AT25555.pep: gold
Preliminary Size:	660
Sequenced Size:	795

Clone AT25555 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

AT25555.complete Sequence

AT25555.complete Blast Records

AT25555.complete Sim4 Records

AT25555.hyp Sequence

AT25555.hyp Blast Records

AT25555.pep Sequence

AT25555.pep Blast Records