AT25643.complete Sequence
615 bp (615 high quality bases) assembled on 2002-06-11
GenBank Submission: AY070820
> AT25643.complete
GTTCGGAGCTCCCTAATAGGGTTGCAGCTGAAGGGGAGAATCGCATACAT
AATGCTACGAGGCAGCATAATCATGAGCCGATTTCACAAGGAGATCCTAT
TGCATTTCGGCTGCCAAAGGAATTTACTTTAACAAAGACGCTTCAAGTGG
CATTGGTGTTTTGAGCGACTGAATTGCGAATAGAGCAGCAATTAATTGTG
GACAACGCATTTTGGCTTTGAGAGCGCAGTAAATGCGGTTGCCACACATG
CGAAAGTTAAAGGAAATCGTGTGTGTTTTAAGGTGACAAGTCGTGGGAAT
AGCCAGGCATGCGAAACCATCAACGCAGGCCGGGAAAAGCAGGATTCAGG
TTCCCGTATGCAGGTCATCCGCCTGTCACGTGCCTAAGCGCACCGGACAA
CGCAATGCAGGTGCCACCGACAGGTCCTTCGGGGATCGAGGTACCTGGGT
GTGGGCTTTCCAGCTGCAGTGCATCCAGAGCCATGCGTGACAAATATTTA
TTAACTGCCACAACTGCCGGGCATCGGCTTAGAGGATTGATCTTGGCATT
AGAGAGCTAATAAAAAATTGATTCCGACTTCGTCAATTGTCACAAATAAA
AAAAAAAAAAAAAAA
AT25643.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:58:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32235.a | 863 | CG32235.a | 266..863 | 1..598 | 2990 | 100 | Plus |
CG32235-RA | 598 | CG32235-RA | 1..598 | 1..598 | 2990 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:15:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 4859248..4859645 | 597..200 | 1990 | 100 | Minus |
chr3L | 24539361 | chr3L | 4859708..4859905 | 201..1 | 910 | 98 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:58:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4859808..4860207 | 599..200 | 2000 | 100 | Minus |
3L | 28110227 | 3L | 4860270..4860470 | 201..1 | 1005 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:47:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 4859808..4860207 | 599..200 | 2000 | 100 | Minus |
3L | 28103327 | 3L | 4860270..4860470 | 201..1 | 1005 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 23:15:34 has no hits.
AT25643.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:16:14 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 4859248..4859644 | 201..597 | 100 | <- | Minus |
chr3L | 4859709..4859905 | 1..200 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:21:41 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..252 | 309..560 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:33:10 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..252 | 309..560 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:41:25 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..252 | 309..560 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:17:05 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..252 | 309..560 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:47:42 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..252 | 309..560 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:38:52 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..597 | 1..597 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:33:09 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..597 | 1..597 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:41:25 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..597 | 1..597 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:17:05 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..597 | 1..597 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:47:42 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32235-RA | 1..597 | 1..597 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:14 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4859810..4860206 | 201..597 | 100 | <- | Minus |
3L | 4860271..4860470 | 1..200 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:14 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4859810..4860206 | 201..597 | 100 | <- | Minus |
3L | 4860271..4860470 | 1..200 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:14 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4859810..4860206 | 201..597 | 100 | <- | Minus |
3L | 4860271..4860470 | 1..200 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:25 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4859810..4860206 | 201..597 | 100 | <- | Minus |
arm_3L | 4860271..4860470 | 1..200 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:54:03 Download gff for
AT25643.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4859810..4860206 | 201..597 | 100 | <- | Minus |
3L | 4860271..4860470 | 1..200 | 100 | | Minus |
AT25643.hyp Sequence
Translation from 308 to 559
> AT25643.hyp
MRNHQRRPGKAGFRFPYAGHPPVTCLSAPDNAMQVPPTGPSGIEVPGCGL
SSCSASRAMRDKYLLTATTAGHRLRGLILALES*
AT25643.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:15:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32235-PA | 83 | CG32235-PA | 1..83 | 1..83 | 444 | 100 | Plus |
AT25643.pep Sequence
Translation from 308 to 559
> AT25643.pep
MRNHQRRPGKAGFRFPYAGHPPVTCLSAPDNAMQVPPTGPSGIEVPGCGL
SSCSASRAMRDKYLLTATTAGHRLRGLILALES*
AT25643.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:11:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14155-PA | 85 | GG14155-PA | 1..84 | 1..82 | 157 | 51.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32235-PA | 83 | CG32235-PA | 1..83 | 1..83 | 444 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:11:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13941-PA | 83 | GM13941-PA | 1..83 | 1..83 | 373 | 90.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:11:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13225-PA | 83 | GD13225-PA | 1..83 | 1..83 | 389 | 92.8 | Plus |