BDGP Sequence Production Resources |
Search the DGRC for AT25873
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 258 |
Well: | 73 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG1882-RB |
Protein status: | AT25873.pep: gold |
Preliminary Size: | 1952 |
Sequenced Size: | 1476 |
Gene | Date | Evidence |
---|---|---|
CG1882 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1882 | 2003-02-13 | Blastp of sequenced clone |
CG1882 | 2008-04-29 | Release 5.5 accounting |
CG1882 | 2008-08-15 | Release 5.9 accounting |
CG1882 | 2008-12-18 | 5.12 accounting |
1476 bp (1476 high quality bases) assembled on 2003-02-13
GenBank Submission: BT003796
> AT25873.complete AAGATATACCCAATTACCCAGCCACATTTCGCTAGCAACTGCGCAATTAA CCGACAGCCGCTGGTTAAGTAATTTTCGGGTCGGACCACCTGGCATGGAT GACATAGCCAGCGGCTAGAGGATCCCCGGAACAATAGATTCTTTCTCTGG AAATGGTTGTGTAACTGGACATCCAGCTCACCAACTATGCTGCGTGCCGT GGAGAAGAAGATACTGTCGTACGTGAAGCTGCCCTACCGCGGCTTCTTCG TGGATATCGGGCCGGCGGTGGGCGAAGCGGATAAGATCTGGACCATCAGC ATGAATACCGAGTCCAAGGAGGTGCCGCTGGTGCTCCTGCATGGCCTGGG CGCAGGCATTGCCCTGTGGGTGATGAACCTCGATGCCTTTGCCAAGGGCC GACCAGTATACGCCATGGACATCCTCGGATTCGGTCGCAGCTCTCGGCCG CTGTTCGCCAAGGATGCGCTGGTGTGCGAGAAGCAATTTGTGAAATCGGT GGAGGAGTGGCGGCGCGAGATGAACATCAACGACATGATTCTGTTGGGCC ACTCGATGGGCGGCTTCATTGCCTCCAGCTACGCCCTCTCACATCCGGAG CGTGTGAAACACCTCATACTGGCCGATCCCTGGGGCTTCCCCGAGAAGCC CTCGGATTCGACCAACGGCAAAACAATACCGCTCTGGGTGCGGGCCATAG CTAGAGTACTGACCCCGCTAAATCCGTTGTGGGCTCTCCGCGCCGCCGGA CCCTTTGGCCAGTGGGTGGTGCAAAAGACGCGGCCAGACATTATGCGAAA GTTCCAGAGCACCATCGAGGAGGATATCAACTTGCTGCCGCAGTACATAC ACCAGTGCAATGCGCAGAATCCCAGCGGTGAGTCCGCCTTCCACACAATG ATGCAATCCTTTGGATGGGCCAAGCACCCCATGATTCACCGCATCAAGGA CGTGCGCAGCGACATACCAATCACGTTCATCTACGGCTCCCGTTCGTGGA TCGACTCGTCGTCGGGGGAGAAGATCAAGTCGCAGCGCGGCAGCAATATG GTGGACATCAAGATCGTGACGGGCGCCGGCCACCACGTATATGCCGACAA GCCGGACGTGTTCAACCGCTACGTGAACGAGACCTGTGATATGTACAAGG TGGCCGGTGGCAAGCTGATAACGCCCCTGCAGCTAATCCGCGAATCCACC GAGTCCGACGAGGAGCGCGAGCCCAGCCTGAGCACAGCGAAGACGGTCGA GGTCCAGCCAGAAGTCCAGCCGGTGCCCCAACCTGTCACCGCAGCCGACA CATCCACGCCGACCGCCGACGAACTGGCGGCGAACATCAAACCGAAGTGA GCAGAAGCAGCGGCATTCGCTGAGAACCAAACAAAAATCACAGCTCGCCT GCCAGCCTGTATCTATTAGCTTAGTGTCTTTGCCTAGTATTAAATGGTCA TCTTATCCAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3700399..3700518 | 1..120 | 100 | -> | Plus |
chr2R | 3700602..3701939 | 121..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RA | 130..1365 | 115..1350 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RA | 130..1365 | 115..1350 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RA | 130..1365 | 115..1350 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RA | 130..1365 | 115..1350 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RA | 130..1365 | 115..1350 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RB | 2..1459 | 1..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RB | 2..1459 | 1..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RB | 1..1458 | 1..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RB | 2..1459 | 1..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1882-RB | 1..1458 | 1..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7813078..7813197 | 1..120 | 100 | -> | Plus |
2R | 7813281..7814618 | 121..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7813078..7813197 | 1..120 | 100 | -> | Plus |
2R | 7813281..7814618 | 121..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7813078..7813197 | 1..120 | 100 | -> | Plus |
2R | 7813281..7814618 | 121..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3700583..3700702 | 1..120 | 100 | -> | Plus |
arm_2R | 3700786..3702123 | 121..1458 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7814480..7815817 | 121..1458 | 99 | Plus | |
2R | 7814277..7814396 | 1..120 | 100 | -> | Plus |
Translation from 186 to 1349
> AT25873.pep MLRAVEKKILSYVKLPYRGFFVDIGPAVGEADKIWTISMNTESKEVPLVL LHGLGAGIALWVMNLDAFAKGRPVYAMDILGFGRSSRPLFAKDALVCEKQ FVKSVEEWRREMNINDMILLGHSMGGFIASSYALSHPERVKHLILADPWG FPEKPSDSTNGKTIPLWVRAIARVLTPLNPLWALRAAGPFGQWVVQKTRP DIMRKFQSTIEEDINLLPQYIHQCNAQNPSGESAFHTMMQSFGWAKHPMI HRIKDVRSDIPITFIYGSRSWIDSSSGEKIKSQRGSNMVDIKIVTGAGHH VYADKPDVFNRYVNETCDMYKVAGGKLITPLQLIRESTESDEEREPSLST AKTVEVQPEVQPVPQPVTAADTSTPTADELAANIKPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13636-PA | 463 | GF13636-PA | 64..463 | 1..387 | 1870 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23305-PA | 454 | GG23305-PA | 68..454 | 1..387 | 2046 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20321-PA | 444 | GH20321-PA | 50..415 | 1..360 | 1725 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1882-PG | 454 | CG1882-PG | 68..454 | 1..387 | 2031 | 100 | Plus |
CG1882-PF | 454 | CG1882-PF | 68..454 | 1..387 | 2031 | 100 | Plus |
CG1882-PE | 387 | CG1882-PE | 1..387 | 1..387 | 2031 | 100 | Plus |
CG1882-PB | 387 | CG1882-PB | 1..387 | 1..387 | 2031 | 100 | Plus |
CG1882-PD | 387 | CG1882-PD | 1..387 | 1..387 | 2031 | 100 | Plus |
CG1882-PC | 387 | CG1882-PC | 1..387 | 1..387 | 2031 | 100 | Plus |
CG1882-PA | 454 | CG1882-PA | 68..454 | 1..387 | 2031 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19993-PA | 476 | GI19993-PA | 50..437 | 1..382 | 1742 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10842-PA | 446 | GL10842-PA | 58..446 | 1..387 | 1886 | 90.7 | Plus |
Dper\GL25694-PA | 343 | GL25694-PA | 38..338 | 2..317 | 662 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15096-PA | 446 | GA15096-PA | 58..446 | 1..387 | 1886 | 90.7 | Plus |
Dpse\GA25396-PA | 343 | GA25396-PA | 38..338 | 2..317 | 666 | 39.9 | Plus |
Dpse\GA29248-PA | 343 | GA29248-PA | 38..338 | 2..317 | 660 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20984-PA | 454 | GM20984-PA | 68..454 | 1..387 | 2069 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10511-PA | 439 | GD10511-PA | 68..439 | 1..387 | 1938 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21242-PA | 455 | GJ21242-PA | 50..415 | 1..363 | 1759 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22221-PA | 460 | GK22221-PA | 60..460 | 1..387 | 1690 | 80.3 | Plus |
Dwil\GK14854-PA | 358 | GK14854-PA | 44..341 | 2..318 | 625 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19151-PA | 454 | GE19151-PA | 68..454 | 1..387 | 2048 | 98.4 | Plus |
Translation from 186 to 1349
> AT25873.hyp MLRAVEKKILSYVKLPYRGFFVDIGPAVGEADKIWTISMNTESKEVPLVL LHGLGAGIALWVMNLDAFAKGRPVYAMDILGFGRSSRPLFAKDALVCEKQ FVKSVEEWRREMNINDMILLGHSMGGFIASSYALSHPERVKHLILADPWG FPEKPSDSTNGKTIPLWVRAIARVLTPLNPLWALRAAGPFGQWVVQKTRP DIMRKFQSTIEEDINLLPQYIHQCNAQNPSGESAFHTMMQSFGWAKHPMI HRIKDVRSDIPITFIYGSRSWIDSSSGEKIKSQRGSNMVDIKIVTGAGHH VYADKPDVFNRYVNETCDMYKVAGGKLITPLQLIRESTESDEEREPSLST AKTVEVQPEVQPVPQPVTAADTSTPTADELAANIKPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1882-PE | 387 | CG1882-PE | 1..387 | 1..387 | 2031 | 100 | Plus |
CG1882-PB | 387 | CG1882-PB | 1..387 | 1..387 | 2031 | 100 | Plus |
CG1882-PD | 387 | CG1882-PD | 1..387 | 1..387 | 2031 | 100 | Plus |
CG1882-PC | 387 | CG1882-PC | 1..387 | 1..387 | 2031 | 100 | Plus |
CG1882-PG | 454 | CG1882-PG | 68..454 | 1..387 | 2031 | 100 | Plus |