BDGP Sequence Production Resources |
Search the DGRC for AT26185
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 261 |
Well: | 85 |
Vector: | pOTB7 |
Associated Gene/Transcript | Arl4-RA |
Protein status: | AT26185.pep: gold |
Preliminary Size: | 507 |
Sequenced Size: | 1029 |
Gene | Date | Evidence |
---|---|---|
CG2219 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2219 | 2002-04-21 | Blastp of sequenced clone |
CG2219 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2219 | 2008-04-29 | Release 5.5 accounting |
CG2219 | 2008-08-15 | Release 5.9 accounting |
CG2219 | 2008-12-18 | 5.12 accounting |
1029 bp (1029 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113302
> AT26185.complete AAAATCGACAATATTTCATTGAAGAATGGGTGCTACAATGGTAAAACCGT TGGTAAAAAATGGAAATATTTTGGATGCACTGCCATCACAGGCAACTCTA CATGTAGTTATGTTAGGTTTGGATTCTGCGGGAAAAACAACGGCTTTATA CAGACTTAAGTTTGATCAATACTTAAACACAGTGCCAACTATTGGATTTA ATTGTGAAAAGGTACAATGTACCCTTGGCAAAGCAAAAGGAGTTCATTTT TTGGTTTGGGATGTCGGAGGACAAGAAAAATTGAGACCACTTTGGAGAAG TTATACACGTTGCACTGATGGCATTTTGTTTGTTATTGATTCTGTTGATA CAGAAAGAATGGAAGAAGCTAAGATGGAATTAATGCGTACCGCTAAATGT CCTGATAACCAGGGTGTTCCCGTTCTGATACTAGCAAATAAACAGGATCT GCCCAACGCTTGTGGTGCAATGGAACTGGAAAAACTTTTAGGACTGAACG AACTTTACAACCCGGTGCCTAATATATCAATGCCCTCTAGTTCCGACTCT TCTCCCACAATTAATTTAATTGGCTGTAGAGTTTCAAACCAAAGTATTAC AGATAAATCTTTAGAAGAGAAAAAAGAGAGTCATCTGCATTCGTCTATGA TTCACATAAAACCTGCACTTGAAAGTAAAGACCACAATTCCACGTTAAGC GGAGGAGCCTTGACAGCTTTTATATATCCGCAATCTCACAACAATTCTGC TGTACTGGATCAAAAAAACCCACAAGATGTTAAAAATGGTTTTCATAACA AAAAGATGAACAGGTCTTCATCAAATTCTGTGCAATTTAGGGGGTGGTAT ATACAGCCAACCTGTGCTATAACTGGTGAGGGTCTCCAAGAAGGTTTGGA CGCTCTGTATGATATGATTTTAAAACGCCGAAAAATTAATAAGTCAAATA AAAGAAATCTGTAGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2219-RA | 1178 | CG2219-RA | 122..1091 | 1..970 | 4850 | 100 | Plus |
CG2219.b | 1015 | CG2219.b | 40..1012 | 1..970 | 4795 | 99.6 | Plus |
CG2219.a | 1099 | CG2219.a | 157..1021 | 106..970 | 4325 | 100 | Plus |
CG2219.a | 1099 | CG2219.a | 68..158 | 1..91 | 455 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr4 | 1351717 | chr4 | 198071..198627 | 967..411 | 2785 | 100 | Minus |
chr4 | 1351717 | chr4 | 199722..199846 | 214..90 | 625 | 100 | Minus |
chr4 | 1351717 | chr4 | 199410..199514 | 413..309 | 525 | 100 | Minus |
chr4 | 1351717 | chr4 | 199570..199669 | 309..210 | 500 | 100 | Minus |
chr4 | 1351717 | chr4 | 199896..199987 | 92..1 | 460 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1348131 | 4 | 177435..177994 | 970..411 | 2800 | 100 | Minus |
4 | 1348131 | 4 | 179089..179213 | 214..90 | 625 | 100 | Minus |
4 | 1348131 | 4 | 178777..178881 | 413..309 | 525 | 100 | Minus |
4 | 1348131 | 4 | 178937..179036 | 309..210 | 500 | 100 | Minus |
4 | 1348131 | 4 | 179263..179354 | 92..1 | 460 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1331231 | 4 | 177435..177994 | 970..411 | 2800 | 100 | Minus |
4 | 1331231 | 4 | 179089..179213 | 214..90 | 625 | 100 | Minus |
4 | 1331231 | 4 | 178777..178881 | 413..309 | 525 | 100 | Minus |
4 | 1331231 | 4 | 178937..179036 | 309..210 | 500 | 100 | Minus |
4 | 1331231 | 4 | 179263..179354 | 92..1 | 460 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 2104..2250 | 810..670 | 118 | 56.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr4 | 198071..198625 | 413..967 | 100 | <- | Minus |
chr4 | 199411..199513 | 310..412 | 100 | <- | Minus |
chr4 | 199570..199667 | 212..309 | 100 | <- | Minus |
chr4 | 199725..199844 | 92..211 | 100 | <- | Minus |
chr4 | 199897..199987 | 1..91 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2219-RA | 1..939 | 26..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2219-RA | 1..939 | 26..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2219-RA | 1..939 | 26..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2219-RA | 1..939 | 26..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arl4-RA | 1..939 | 26..964 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2219-RA | 1..967 | 1..967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2219-RA | 1..967 | 1..967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2219-RA | 36..1002 | 1..967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2219-RA | 1..967 | 1..967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arl4-RA | 36..1002 | 1..967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 179264..179354 | 1..91 | 100 | Minus | |
4 | 177438..177992 | 413..967 | 100 | <- | Minus |
4 | 178778..178880 | 310..412 | 100 | <- | Minus |
4 | 178937..179034 | 212..309 | 100 | <- | Minus |
4 | 179092..179211 | 92..211 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 179264..179354 | 1..91 | 100 | Minus | |
4 | 177438..177992 | 413..967 | 100 | <- | Minus |
4 | 178778..178880 | 310..412 | 100 | <- | Minus |
4 | 178937..179034 | 212..309 | 100 | <- | Minus |
4 | 179092..179211 | 92..211 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 179264..179354 | 1..91 | 100 | Minus | |
4 | 177438..177992 | 413..967 | 100 | <- | Minus |
4 | 178778..178880 | 310..412 | 100 | <- | Minus |
4 | 178937..179034 | 212..309 | 100 | <- | Minus |
4 | 179092..179211 | 92..211 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_4 | 199890..199980 | 1..91 | 100 | Minus | |
arm_4 | 198064..198618 | 413..967 | 100 | <- | Minus |
arm_4 | 199404..199506 | 310..412 | 100 | <- | Minus |
arm_4 | 199563..199660 | 212..309 | 100 | <- | Minus |
arm_4 | 199718..199837 | 92..211 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 179092..179211 | 92..211 | 100 | <- | Minus |
4 | 179264..179354 | 1..91 | 100 | Minus | |
4 | 177438..177992 | 413..967 | 100 | <- | Minus |
4 | 178778..178880 | 310..412 | 100 | <- | Minus |
4 | 178937..179034 | 212..309 | 100 | <- | Minus |
Translation from 25 to 963
> AT26185.pep MGATMVKPLVKNGNILDALPSQATLHVVMLGLDSAGKTTALYRLKFDQYL NTVPTIGFNCEKVQCTLGKAKGVHFLVWDVGGQEKLRPLWRSYTRCTDGI LFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQDLPNACGAME LEKLLGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKK ESHLHSSMIHIKPALESKDHNSTLSGGALTAFIYPQSHNNSAVLDQKNPQ DVKNGFHNKKMNRSSSNSVQFRGWYIQPTCAITGEGLQEGLDALYDMILK RRKINKSNKRNL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13910-PA | 178 | GF13910-PA | 1..129 | 1..129 | 672 | 93.8 | Plus |
Dana\GF20141-PA | 178 | GF20141-PA | 1..176 | 130..310 | 472 | 56.6 | Plus |
Dana\GF23441-PA | 182 | GF23441-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dana\GF13030-PA | 175 | GF13030-PA | 2..144 | 13..160 | 356 | 46.6 | Plus |
Dana\GF23416-PA | 180 | GF23416-PA | 7..150 | 14..162 | 353 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16460-PA | 305 | GG16460-PA | 1..305 | 1..312 | 1523 | 92 | Plus |
Dere\GG13164-PA | 182 | GG13164-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dere\GG16407-PA | 180 | GG16407-PA | 7..150 | 14..162 | 354 | 47.7 | Plus |
Dere\GG20511-PA | 175 | GG20511-PA | 2..144 | 13..160 | 353 | 45.9 | Plus |
Dere\GG15940-PA | 190 | GG15940-PA | 27..170 | 25..173 | 302 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23983-PA | 292 | GH23983-PA | 1..290 | 1..311 | 973 | 65.4 | Plus |
Dgri\GH14762-PA | 182 | GH14762-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dgri\GH14763-PA | 182 | GH14763-PA | 7..161 | 14..173 | 360 | 43.8 | Plus |
Dgri\GH23951-PA | 180 | GH23951-PA | 7..150 | 14..162 | 353 | 47 | Plus |
Dgri\GH20425-PA | 175 | GH20425-PA | 2..144 | 13..160 | 344 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Arl4-PA | 312 | CG2219-PA | 1..312 | 1..312 | 1629 | 100 | Plus |
Arl4-PB | 313 | CG2219-PB | 1..313 | 1..312 | 1617 | 99.7 | Plus |
Arl4-PC | 100 | CG2219-PC | 1..95 | 1..95 | 502 | 100 | Plus |
Arf79F-PJ | 182 | CG8385-PJ | 7..150 | 14..162 | 362 | 49 | Plus |
Arf79F-PI | 182 | CG8385-PI | 7..150 | 14..162 | 362 | 49 | Plus |
Arf79F-PH | 182 | CG8385-PH | 7..150 | 14..162 | 362 | 49 | Plus |
Arf79F-PF | 182 | CG8385-PF | 7..150 | 14..162 | 362 | 49 | Plus |
Arf79F-PC | 182 | CG8385-PC | 7..150 | 14..162 | 362 | 49 | Plus |
Arf79F-PE | 182 | CG8385-PE | 7..150 | 14..162 | 362 | 49 | Plus |
Arf79F-PB | 182 | CG8385-PB | 7..150 | 14..162 | 362 | 49 | Plus |
Arf79F-PA | 182 | CG8385-PA | 7..150 | 14..162 | 362 | 49 | Plus |
Arf102F-PB | 180 | CG11027-PB | 7..150 | 14..162 | 346 | 47 | Plus |
Arf102F-PA | 180 | CG11027-PA | 7..150 | 14..162 | 346 | 47 | Plus |
Arf51F-PE | 175 | CG8156-PE | 2..144 | 13..160 | 342 | 45.9 | Plus |
Arf51F-PA | 175 | CG8156-PA | 2..144 | 13..160 | 342 | 45.9 | Plus |
Arf51F-PC | 175 | CG8156-PC | 2..144 | 13..160 | 342 | 45.9 | Plus |
Arf51F-PB | 175 | CG8156-PB | 2..144 | 13..160 | 342 | 45.9 | Plus |
Arf51F-PD | 175 | CG8156-PD | 2..144 | 13..160 | 342 | 45.9 | Plus |
Arl1-PA | 180 | CG6025-PA | 17..149 | 25..162 | 291 | 42.8 | Plus |
Arl5-PA | 179 | CG7197-PA | 19..147 | 27..160 | 270 | 41.8 | Plus |
dnd-PA | 179 | CG6560-PA | 20..148 | 27..160 | 263 | 42.5 | Plus |
Arl2-PA | 184 | CG7435-PA | 17..147 | 25..160 | 252 | 38.2 | Plus |
Arfrp1-PA | 200 | CG7039-PA | 20..148 | 27..152 | 241 | 43.9 | Plus |
Arl8-PC | 186 | CG7891-PC | 21..152 | 25..160 | 220 | 33.6 | Plus |
Arl8-PB | 186 | CG7891-PB | 21..152 | 25..160 | 220 | 33.6 | Plus |
Arl8-PA | 186 | CG7891-PA | 21..152 | 25..160 | 220 | 33.6 | Plus |
Sar1-PE | 193 | CG7073-PE | 23..151 | 27..160 | 209 | 38.1 | Plus |
Sar1-PC | 193 | CG7073-PC | 23..151 | 27..160 | 209 | 38.1 | Plus |
Sar1-PD | 193 | CG7073-PD | 23..151 | 27..160 | 209 | 38.1 | Plus |
Sar1-PA | 193 | CG7073-PA | 23..151 | 27..160 | 209 | 38.1 | Plus |
Arl6-PA | 202 | CG7735-PA | 20..154 | 27..160 | 155 | 30.4 | Plus |
Arl6-PB | 201 | CG7735-PB | 20..153 | 27..160 | 154 | 30.4 | Plus |
CG17819-PA | 186 | CG17819-PA | 23..183 | 27..188 | 152 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14111-PA | 293 | GI14111-PA | 1..291 | 1..311 | 966 | 65.3 | Plus |
Dmoj\GI11864-PA | 182 | GI11864-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dmoj\GI14031-PA | 180 | GI14031-PA | 7..150 | 14..162 | 353 | 47 | Plus |
Dmoj\GI19608-PA | 175 | GI19608-PA | 2..144 | 13..160 | 345 | 45.3 | Plus |
Dmoj\GI15002-PA | 196 | GI15002-PA | 9..151 | 15..162 | 324 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18160-PA | 312 | GL18160-PA | 1..310 | 1..310 | 1173 | 75.1 | Plus |
Dper\GL25178-PA | 182 | GL25178-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dper\GL17751-PA | 175 | GL17751-PA | 2..144 | 13..160 | 355 | 45.9 | Plus |
Dper\GL18404-PA | 180 | GL18404-PA | 7..150 | 14..162 | 352 | 47 | Plus |
Dper\GL24385-PA | 181 | GL24385-PA | 6..149 | 13..162 | 338 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15309-PA | 312 | GA15309-PA | 1..310 | 1..310 | 1163 | 74.4 | Plus |
Dpse\GA21036-PA | 182 | GA21036-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dpse\GA20856-PA | 175 | GA20856-PA | 2..144 | 13..160 | 355 | 45.9 | Plus |
Dpse\GA10714-PA | 180 | GA10714-PA | 7..150 | 14..162 | 352 | 47 | Plus |
Dpse\GA23613-PA | 181 | GA23613-PA | 6..149 | 13..162 | 338 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23230-PA | 307 | GM23230-PA | 1..307 | 1..312 | 1599 | 96.8 | Plus |
Dsec\GM22073-PA | 182 | GM22073-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dsec\GM21603-PA | 175 | GM21603-PA | 2..144 | 13..160 | 353 | 45.9 | Plus |
Dsec\GM13026-PA | 180 | GM13026-PA | 7..150 | 14..162 | 352 | 47 | Plus |
Dsec\GM25571-PA | 180 | GM25571-PA | 17..160 | 25..173 | 305 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24390-PA | 137 | GD24390-PA | 1..129 | 1..129 | 702 | 100 | Plus |
Dsim\GD12049-PA | 182 | GD12049-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dsim\GD11108-PA | 175 | GD11108-PA | 2..144 | 13..160 | 353 | 45.9 | Plus |
Dsim\GD20493-PA | 180 | GD20493-PA | 7..150 | 14..162 | 352 | 47 | Plus |
Dsim\GD14586-PA | 180 | GD14586-PA | 17..160 | 25..173 | 305 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21658-PA | 307 | GJ21658-PA | 1..305 | 1..311 | 969 | 63.9 | Plus |
Dvir\GJ13559-PA | 182 | GJ13559-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dvir\GJ19602-PA | 180 | GJ19602-PA | 7..150 | 14..162 | 353 | 47 | Plus |
Dvir\GJ14973-PA | 175 | GJ14973-PA | 2..144 | 13..160 | 345 | 45.3 | Plus |
Dvir\GJ15360-PA | 193 | GJ15360-PA | 8..148 | 15..160 | 309 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13675-PA | 309 | GK13675-PA | 1..307 | 1..310 | 980 | 65.5 | Plus |
Dwil\GK20496-PA | 182 | GK20496-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dwil\GK13623-PA | 180 | GK13623-PA | 7..150 | 14..162 | 353 | 47 | Plus |
Dwil\GK20891-PA | 175 | GK20891-PA | 2..144 | 13..160 | 352 | 45.9 | Plus |
Dwil\GK24495-PA | 167 | GK24495-PA | 4..147 | 25..173 | 306 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14526-PA | 312 | GE14526-PA | 1..310 | 1..310 | 1420 | 91.9 | Plus |
Dyak\GE19486-PA | 182 | GE19486-PA | 6..150 | 13..162 | 377 | 48.7 | Plus |
Dyak\GE13644-PA | 175 | GE13644-PA | 2..144 | 13..160 | 353 | 45.9 | Plus |
Dyak\Arf102F-PA | 180 | GE14567-PA | 7..150 | 14..162 | 352 | 47.7 | Plus |
Dyak\GE22880-PA | 180 | GE22880-PA | 17..160 | 25..173 | 305 | 40.9 | Plus |
Translation from 25 to 963
> AT26185.hyp MGATMVKPLVKNGNILDALPSQATLHVVMLGLDSAGKTTALYRLKFDQYL NTVPTIGFNCEKVQCTLGKAKGVHFLVWDVGGQEKLRPLWRSYTRCTDGI LFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQDLPNACGAME LEKLLGLNELYNPVPNISMPSSSDSSPTINLIGCRVSNQSITDKSLEEKK ESHLHSSMIHIKPALESKDHNSTLSGGALTAFIYPQSHNNSAVLDQKNPQ DVKNGFHNKKMNRSSSNSVQFRGWYIQPTCAITGEGLQEGLDALYDMILK RRKINKSNKRNL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Arl4-PA | 312 | CG2219-PA | 1..312 | 1..312 | 1629 | 100 | Plus |
Arl4-PB | 313 | CG2219-PB | 1..313 | 1..312 | 1617 | 99.7 | Plus |
Arl4-PC | 100 | CG2219-PC | 1..95 | 1..95 | 502 | 100 | Plus |
Arf79F-PJ | 182 | CG8385-PJ | 7..150 | 14..162 | 362 | 49 | Plus |
Arf79F-PI | 182 | CG8385-PI | 7..150 | 14..162 | 362 | 49 | Plus |