Clone AT26201 Report

Search the DGRC for AT26201

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:262
Well:1
Vector:pOTB7
Associated Gene/TranscriptCG17030-RA
Protein status:AT26201.pep: gold
Preliminary Size:675
Sequenced Size:719

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17030 2002-01-01 Sim4 clustering to Release 2
CG17030 2002-01-18 Blastp of sequenced clone
CG17030 2003-01-01 Sim4 clustering to Release 3
CG17030 2008-04-29 Release 5.5 accounting
CG17030 2008-08-15 Release 5.9 accounting
CG17030 2008-12-18 5.12 accounting

Clone Sequence Records

AT26201.complete Sequence

719 bp (719 high quality bases) assembled on 2002-01-18

GenBank Submission: AY089444

> AT26201.complete
AACACACGCAAGCTTTTCCACCCGCTAACACTTAAAGCACAACACAAAAA
CAGAGGACACCATGGCCAAAAAGGAGGAGCCTCTTATGGACGGACCCAAG
CGGATGAACCGCGAATTGGCCCTGATGTTGGAGGATAAACAGAATTTGCA
GTTCCGAAACCTCTTGGTGGAGCCGAACAACATCTACAAGTGGACAGGCC
TGCTGATGCCGGTGGCACCGCCTTATGACAAGGGTGCCTACAAAATGGAG
ATCGACTTTCCACTGGATTACCCATTCAAGCCGCCTCGCATCCATATAAA
CACGAGGATGTACCACCTGAATGTCAATGAGCGTGGTCAGGTGTGTGTGC
CTATTTTGGAGGTCGAGCACTGGATCCCAACCACGCGGATTGACCAGGTG
CTGCAGGTACTGCTGGCCACCATAAATGATCCACAGCCGGAGAACGCCTG
GCACATCGAAATGGCCGGCGAGTATCGCAATGATCCGGTGCGATTCTTCA
AAATGGCCGATGCCTGGGTGCAGAAGTACAGTGAACCCCGGCCCACTGAA
GAGGAGCTAGCAAAGTTTGCGCGCAAGCGAAAGAAAGCGATGACGAAGAA
GTAGAGGGTATACTGTACTATATGTAAATTATGATGTAAATTAAGTAATT
AAAGATATCACCAAAGTTCCAAAATAGATAATTCCAATCTAAATATAAAA
AAAAAAAAAAAAAAAAAAA

AT26201.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:56:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG17030-RA 789 CG17030-RA 72..774 1..703 3440 99.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4979473..4980168 696..1 3240 97.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:59:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:52:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4979996..4980698 703..1 3440 99.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4979996..4980698 703..1 3440 99.2 Minus
Blast to na_te.dros performed on 2019-03-16 09:52:55 has no hits.

AT26201.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:54:02 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4979473..4980168 1..696 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:22:27 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 1..543 62..604 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:54:37 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 1..543 62..604 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:59:39 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 1..543 62..604 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:37:09 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 1..543 62..604 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:46:56 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 1..543 62..604 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:07:33 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 72..767 1..696 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:54:36 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 72..767 1..696 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:39 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 72..767 1..696 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:37:09 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 72..767 1..696 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:46:56 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
CG17030-RA 72..767 1..696 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:54:02 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4980003..4980698 1..696 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:54:02 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4980003..4980698 1..696 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:54:02 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4980003..4980698 1..696 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:39 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4980003..4980698 1..696 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:19:54 Download gff for AT26201.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4980003..4980698 1..696 99   Minus

AT26201.pep Sequence

Translation from 61 to 603

> AT26201.pep
MAKKEEPLMDGPKRMNRELALMLEDKQNLQFRNLLVEPNNIYKWTGLLMP
VAPPYDKGAYKMEIDFPLDYPFKPPRIHINTRMYHLNVNERGQVCVPILE
VEHWIPTTRIDQVLQVLLATINDPQPENAWHIEMAGEYRNDPVRFFKMAD
AWVQKYSEPRPTEEELAKFARKRKKAMTKK*

AT26201.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24708-PA 180 GF24708-PA 1..179 1..179 802 82.1 Plus
Dana\GF13219-PA 154 GF13219-PA 1..154 9..163 409 45.8 Plus
Dana\GF17299-PA 153 GF17299-PA 1..152 9..161 364 43.1 Plus
Dana\GF18131-PA 147 GF18131-PA 4..146 13..157 229 32.9 Plus
Dana\GF19392-PA 272 GF19392-PA 110..235 39..164 214 29.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14153-PA 180 GG14153-PA 1..179 1..179 929 96.6 Plus
Dere\GG21014-PA 154 GG21014-PA 1..154 9..163 406 45.8 Plus
Dere\GG25139-PA 153 GG25139-PA 1..152 9..161 358 41.8 Plus
Dere\GG21088-PA 147 GG21088-PA 4..146 13..157 229 32.9 Plus
Dere\GG24787-PA 169 GG24787-PA 48..167 39..158 212 33.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15783-PA 180 GH15783-PA 3..177 4..176 583 61.5 Plus
Dgri\GH19845-PA 154 GH19845-PA 1..154 9..163 414 45.8 Plus
Dgri\GH19270-PA 152 GH19270-PA 1..152 9..161 337 40.5 Plus
Dgri\GH14086-PA 147 GH14086-PA 4..146 13..157 229 32.9 Plus
Dgri\GH13340-PA 240 GH13340-PA 92..239 8..157 205 30.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17030-PA 180 CG17030-PA 1..180 1..180 971 100 Plus
Ubc10-PA 154 CG5788-PA 1..154 9..163 411 45.8 Plus
Ubc84D-PA 153 CG12799-PA 1..152 9..161 358 41.8 Plus
eff-PC 147 CG7425-PC 28..146 39..157 230 35 Plus
eff-PB 147 CG7425-PB 28..146 39..157 230 35 Plus
eff-PA 147 CG7425-PA 28..146 39..157 230 35 Plus
CG5440-PC 169 CG5440-PC 24..167 13..158 211 29.3 Plus
CG5440-PB 169 CG5440-PB 24..167 13..158 211 29.3 Plus
Ubc2-PD 232 CG6720-PD 89..231 13..157 201 29.7 Plus
Ubc2-PC 232 CG6720-PC 89..231 13..157 201 29.7 Plus
Ubc2-PB 232 CG6720-PB 89..231 13..157 201 29.7 Plus
Ubc2-PA 232 CG6720-PA 89..231 13..157 201 29.7 Plus
CG2574-PA 239 CG2574-PA 90..220 40..170 194 29.5 Plus
Ubc87F-PA 168 CG9602-PA 29..165 35..158 192 28.1 Plus
CG40045-PA 168 CG40045-PA 29..165 35..158 187 28.1 Plus
CG10862-PA 354 CG10862-PA 235..354 39..158 185 28.9 Plus
CG40045-PD 167 CG40045-PD 29..164 35..158 183 26.5 Plus
ben-PE 151 CG18319-PE 5..148 12..157 174 25.2 Plus
ben-PD 151 CG18319-PD 5..148 12..157 174 25.2 Plus
ben-PB 151 CG18319-PB 5..148 12..157 174 25.2 Plus
ben-PC 151 CG18319-PC 5..148 12..157 174 25.2 Plus
ben-PA 151 CG18319-PA 5..148 12..157 174 25.2 Plus
CG7656-PF 317 CG7656-PF 60..181 31..139 168 28.7 Plus
CG7656-PA 317 CG7656-PA 60..181 31..139 168 28.7 Plus
CG7656-PE 319 CG7656-PE 60..181 31..139 168 28.7 Plus
CG7656-PD 319 CG7656-PD 60..181 31..139 168 28.7 Plus
Ubc6-PC 151 CG2013-PC 31..147 39..155 167 28.8 Plus
Ubc6-PA 151 CG2013-PA 31..147 39..155 167 28.8 Plus
morgue-PA 491 CG15437-PA 366..483 39..157 164 30.3 Plus
CG40045-PC 132 CG40045-PC 6..129 47..158 162 26.6 Plus
vih-PA 178 CG10682-PA 35..177 13..158 158 26.4 Plus
CG3473-PB 151 CG3473-PB 42..148 50..157 152 27.8 Plus
CG3473-PA 151 CG3473-PA 42..148 50..157 152 27.8 Plus
Ubc7-PB 167 CG4443-PB 29..161 36..155 152 24.1 Plus
Ubc7-PA 167 CG4443-PA 29..161 36..155 152 24.1 Plus
UbcE2H-PB 183 CG2257-PB 7..164 11..176 150 25 Plus
UbcE2H-PC 183 CG2257-PC 7..164 11..176 150 25 Plus
UbcE2H-PA 183 CG2257-PA 7..164 11..176 150 25 Plus
Ubc4-PC 199 CG8284-PC 8..153 14..157 145 26.2 Plus
Ubc4-PB 199 CG8284-PB 8..153 14..157 145 26.2 Plus
Ubc4-PA 199 CG8284-PA 8..153 14..157 145 26.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12563-PA 179 GI12563-PA 2..179 3..180 619 61.8 Plus
Dmoj\GI20435-PA 154 GI20435-PA 1..154 9..163 414 45.8 Plus
Dmoj\GI18316-PA 98 GI18316-PA 1..98 83..180 364 64.3 Plus
Dmoj\GI23479-PA 153 GI23479-PA 1..152 9..161 352 41.2 Plus
Dmoj\GI10619-PA 147 GI10619-PA 4..146 13..157 229 32.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17270-PA 154 GL17270-PA 1..154 9..163 411 46.5 Plus
Dper\GL12172-PA 154 GL12172-PA 1..153 9..161 319 36.6 Plus
Dper\GL23670-PA 147 GL23670-PA 4..146 13..157 229 32.9 Plus
Dper\GL22516-PA 220 GL22516-PA 66..208 13..158 214 27.9 Plus
Dper\GL22792-PA 285 GL22792-PA 134..285 11..165 209 29.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28328-PA 217 GA28328-PA 67..216 30..179 627 74 Plus
Dpse\GA19129-PA 154 GA19129-PA 1..154 9..163 411 46.5 Plus
Dpse\GA26215-PA 154 GA26215-PA 1..153 9..161 321 36.6 Plus
Dpse\GA26693-PA 147 GA26693-PA 4..146 13..157 229 32.9 Plus
Dpse\GA24534-PA 212 GA24534-PA 55..198 13..159 222 29.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:09:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13939-PA 180 GM13939-PA 1..180 1..180 954 99.4 Plus
Dsec\GM19945-PA 154 GM19945-PA 1..154 9..163 399 45.2 Plus
Dsec\GM23061-PA 154 GM23061-PA 1..154 9..163 380 44.5 Plus
Dsec\GM10475-PA 153 GM10475-PA 1..152 9..161 358 41.8 Plus
Dsec\GM25828-PA 147 GM25828-PA 4..146 13..157 229 32.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13222-PA 180 GD13222-PA 1..180 1..180 954 99.4 Plus
Dsim\GD13221-PA 162 GD13221-PA 1..158 1..158 835 98.1 Plus
Dsim\GD25436-PA 154 GD25436-PA 1..154 9..163 399 45.2 Plus
Dsim\GD17512-PA 154 GD17512-PA 1..154 9..163 377 44.5 Plus
Dsim\GD19477-PA 153 GD19477-PA 1..152 9..161 358 41.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15466-PA 178 GJ15466-PA 2..178 3..179 592 62.1 Plus
Dvir\GJ20107-PA 154 GJ20107-PA 1..154 9..163 414 45.8 Plus
Dvir\GJ10233-PA 153 GJ10233-PA 1..152 9..161 355 41.2 Plus
Dvir\GJ22971-PA 147 GJ22971-PA 4..146 13..157 229 32.9 Plus
Dvir\GJ16559-PA 312 GJ16559-PA 93..243 9..160 221 31.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17587-PA 158 GK17587-PA 3..155 4..156 582 67.3 Plus
Dwil\GK22072-PA 154 GK22072-PA 1..154 9..163 414 45.8 Plus
Dwil\GK11079-PA 153 GK11079-PA 1..152 9..161 354 43.2 Plus
Dwil\GK11688-PA 147 GK11688-PA 4..146 13..157 229 32.9 Plus
Dwil\GK16491-PA 236 GK16491-PA 113..232 39..158 211 33.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20579-PA 180 GE20579-PA 1..180 1..180 930 96.7 Plus
Dyak\UbcD10-PA 154 GE13957-PA 1..154 9..163 412 46.5 Plus
Dyak\GE25785-PA 153 GE25785-PA 1..152 9..161 357 41.8 Plus
Dyak\eff-PA 147 GE26430-PA 4..146 13..157 229 32.9 Plus
Dyak\GE17005-PA 248 GE17005-PA 98..234 39..175 209 29 Plus

AT26201.hyp Sequence

Translation from 61 to 603

> AT26201.hyp
MAKKEEPLMDGPKRMNRELALMLEDKQNLQFRNLLVEPNNIYKWTGLLMP
VAPPYDKGAYKMEIDFPLDYPFKPPRIHINTRMYHLNVNERGQVCVPILE
VEHWIPTTRIDQVLQVLLATINDPQPENAWHIEMAGEYRNDPVRFFKMAD
AWVQKYSEPRPTEEELAKFARKRKKAMTKK*

AT26201.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:17:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17030-PA 180 CG17030-PA 1..180 1..180 971 100 Plus
Ubc10-PA 154 CG5788-PA 1..154 9..163 411 45.8 Plus
Ubc84D-PA 153 CG12799-PA 1..152 9..161 358 41.8 Plus
eff-PC 147 CG7425-PC 28..146 39..157 230 35 Plus
eff-PB 147 CG7425-PB 28..146 39..157 230 35 Plus