Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT26438.complete Sequence
1377 bp (1377 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094663
> AT26438.complete
CCAAAACTAAATCTAAACCATTTTAAACTAGAATACGTCTGTGAAATGAA
CCAGGTTTGGGTGTTTTTTAAACTCATCGAGGTGTTGCTGGGCAGTGTTT
GTATGTTTTTCCACATACGCGGCTCATCCTACTGGCCAGAGCGTACTCCT
CATGTGATCCTATATTGTGCCACATTTTCGTCCTTTACGGCGCTCGCCGC
TCTAGGCGCGTTCCGACTGCTATTGGCTAGGAGTACGGTGCTCTCCTCCC
AGCTCCTGCTCACACTGAGTGCCGTGCTGTCGCACTATTTCTGCGGCGTG
CTGATAATGCGCACCGCCATGCTGGACCCTCACCTGGCCTTCATCAATTC
TACCATCGAGTATCTGGAACATCCGCACTTTGCGCACTGCAAGCAGCAGA
GCATCGCTGCGCTGGTTACTGGCACCATGTACCTGATGCACATGTTCCAC
GTGTTCGACCTGCTGATGCGCATGGAACCCGGCGACTGGAAACGTCAGGC
GACTGGCCGTAAGTACTTTGAGGGAACAGAGTCTGGTTCAACCGGGCTAT
TTGTGCTTTCCAAGCCAGTGGACGACTTTCTATGCAAATGCTGCAGGTGC
TACTATAAGTTGGCCAATTCTCAGATCCTGTACTTCCGGCCGAACGCGGA
GGTGGAGCAGCCGCACTTTATAGTCCGCATGTGGCAGTTCATTGGGGATG
CGCGTAAAAAGTTCTTTTCGCTGCATCAGATCGAGAGTGACGAGAGTTTT
CTATCAACGCCAACAATAACCACCAGTGAATCGGATATCACACCGGTGGA
CACGGAGTACAGTGTGTACATGGAAGAGCAGGCCAATAAGATGCGCAGGT
CTGCTTCAGCCTGGCGCGGCTCCAGCGATTCCTCGAGCTTGTGGGCCAAA
ATCGAGGACAGGAGCACTGTTAGCCTTGTTTCAACTCGGTCAAGTGAGAA
CAGCGAGGCCACAATGAAACCCATTCAAATGGATCGGAAGCTAGCCCGGC
GATCTTCCATGTGGGCGGACACTGAGAAAAGGGAGAAATCGGAGATTTTG
CTGGTAGAACAGGGCTCTAGCTATTCTCGGCTCAGAACTTTAAGCAATGC
TGAATTGGTCCATAAGCCAAGCGATGCGGGAGAAAAGGAACAACAAGTTC
CAGATGCAGCCAACCCAAATATTACAAATGAAGAAGCTACGAACTCACAC
ATCGAATTCTCTTTGAAGCCTGGAACTGAGAAAACTTCGTGAATTTGATG
ACGACTTTCCCTAACGAAAATTGTAGCTATTGAAATTTTTTGTTTTGATT
ACGTCGATGTATTTTTACCATAAGATACTATAGCAGTTTATAAATGAAAC
ATACCTGTATGAGAAAAAAAAAAAAAA
AT26438.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:19:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14000-RA | 1384 | CG14000-RA | 1..1364 | 1..1364 | 6820 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:52:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 5907978..5909340 | 1363..1 | 6815 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:59:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:52:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5908926..5910289 | 1364..1 | 6820 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:48:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5908926..5910289 | 1364..1 | 6820 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 00:52:14 has no hits.
AT26438.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:53:08 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 5907978..5909340 | 1..1363 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:22:56 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1197 | 46..1242 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:24:04 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1197 | 46..1242 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:52:59 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1197 | 46..1242 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:00:08 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1197 | 46..1242 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:16:15 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1197 | 46..1242 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:50:51 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1363 | 1..1363 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:24:04 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1363 | 1..1363 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:52:59 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1363 | 1..1363 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:00:09 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1363 | 1..1363 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:16:15 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14000-RA | 1..1363 | 1..1363 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:53:08 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5908927..5910289 | 1..1363 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:53:08 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5908927..5910289 | 1..1363 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:53:08 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5908927..5910289 | 1..1363 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:52:59 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5908927..5910289 | 1..1363 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:33:05 Download gff for
AT26438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5908927..5910289 | 1..1363 | 100 | | Minus |
AT26438.hyp Sequence
Translation from 1 to 1241
> AT26438.hyp
PKLNLNHFKLEYVCEMNQVWVFFKLIEVLLGSVCMFFHIRGSSYWPERTP
HVILYCATFSSFTALAALGAFRLLLARSTVLSSQLLLTLSAVLSHYFCGV
LIMRTAMLDPHLAFINSTIEYLEHPHFAHCKQQSIAALVTGTMYLMHMFH
VFDLLMRMEPGDWKRQATGRKYFEGTESGSTGLFVLSKPVDDFLCKCCRC
YYKLANSQILYFRPNAEVEQPHFIVRMWQFIGDARKKFFSLHQIESDESF
LSTPTITTSESDITPVDTEYSVYMEEQANKMRRSASAWRGSSDSSSLWAK
IEDRSTVSLVSTRSSENSEATMKPIQMDRKLARRSSMWADTEKREKSEIL
LVEQGSSYSRLRTLSNAELVHKPSDAGEKEQQVPDAANPNITNEEATNSH
IEFSLKPGTEKTS*
AT26438.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:17:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14000-PA | 398 | CG14000-PA | 1..398 | 16..413 | 2067 | 100 | Plus |
AT26438.pep Sequence
Translation from 45 to 1241
> AT26438.pep
MNQVWVFFKLIEVLLGSVCMFFHIRGSSYWPERTPHVILYCATFSSFTAL
AALGAFRLLLARSTVLSSQLLLTLSAVLSHYFCGVLIMRTAMLDPHLAFI
NSTIEYLEHPHFAHCKQQSIAALVTGTMYLMHMFHVFDLLMRMEPGDWKR
QATGRKYFEGTESGSTGLFVLSKPVDDFLCKCCRCYYKLANSQILYFRPN
AEVEQPHFIVRMWQFIGDARKKFFSLHQIESDESFLSTPTITTSESDITP
VDTEYSVYMEEQANKMRRSASAWRGSSDSSSLWAKIEDRSTVSLVSTRSS
ENSEATMKPIQMDRKLARRSSMWADTEKREKSEILLVEQGSSYSRLRTLS
NAELVHKPSDAGEKEQQVPDAANPNITNEEATNSHIEFSLKPGTEKTS*
AT26438.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF15443-PA | 417 | GF15443-PA | 1..358 | 1..347 | 883 | 52.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24274-PA | 397 | GG24274-PA | 1..396 | 1..396 | 1769 | 85.1 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:11:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH16269-PA | 275 | GH16269-PA | 1..224 | 1..210 | 316 | 32 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14000-PA | 398 | CG14000-PA | 1..398 | 1..398 | 2067 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:11:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI13205-PA | 232 | GI13205-PA | 1..213 | 1..201 | 247 | 30 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:11:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL19107-PA | 378 | GL19107-PA | 1..294 | 1..291 | 873 | 61.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:11:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA12689-PA | 461 | GA12689-PA | 1..305 | 1..303 | 847 | 59.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:11:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM17988-PA | 376 | GM17988-PA | 1..373 | 1..374 | 1851 | 94.7 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:11:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ11981-PA | 287 | GJ11981-PA | 1..218 | 1..202 | 287 | 29.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:11:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18971-PA | 397 | GE18971-PA | 1..397 | 1..397 | 1795 | 86.4 | Plus |