Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT26658.complete Sequence
844 bp (844 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089451
> AT26658.complete
AAAACTCAAACGGAAATGTCAGCAAAAACACATTTTGTAGGTAAATAGTC
ACACGGACACACACAAATCAAATTCAAGCCCCGGGCTCGAGATCTCTGAC
GGGTTCAAGCACGAATCGAAGATGTGCAGCCCCTGCTGTGGATCCTGCTG
CGGACCTTGCTGCTCCCCCTGCTGCAGCCCTTGTTGTCCACCGTGCTGCA
ATGACTGCTGCGGGTCCTGCTGCAGTCCGTGTTGCGGACCCTGTTGCAGC
CCCTGCTGCGGACCCTGCTGCAGCCCCTGCTGCAGTCCTTGCTGCACCCC
CTGTTGCACCCCTTGCTGCACGCCGTGCTGCAAGTGTTGCACACCCTGCT
GCGTGCCGTGTTGCACACCCTGCTGCACCCCCTGCTGCACTCCCTGTTGC
ACCCCTTGCTGCAGTCCGTGCTGCGGTCCGTGCTGCAGCCCCTGCTGCTC
TCCTTGCGGAGGGTCAAAGTGCAAGTGATCCACGGCAGCGAATACGGATT
CGTTTTCGGAGGCAGGAGCTAGGCGCAAATGCCACCACAAGTTCGTCGAG
CTCGTTGGAGAGCCGTTGGAGCCCACCTGCTATTACCAGCTAAGGGAATC
ATACACACGAAAAGTCAACGGCAGAGCCAAGTTCTCAGGCCCCCTAGTAG
TGGGGATACGAGAACGTAAGGGAAGTGGAACCATCTGCTCCCGGGGTCAT
GTTAATGAAGACACAGATTAGACAGCGGGCCCAGGTAAAAGTTGGTCATC
CCCAACTTATGCCAGTTAGTGCTGTGTAAAGTTTTTGGCCTCTTCCAAAA
ATTAATTAAAATCAGTTTCAACCTAAAAAAAAAAAAAAAAAAAA
AT26658.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:28:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pif2-RA | 1040 | Pif2-RA | 65..889 | 1..825 | 4095 | 99.7 | Plus |
CG31302-RE | 4994 | CG31302-RE | 4605..4707 | 448..346 | 215 | 80.5 | Minus |
CG31302.d | 5006 | CG31302.d | 4617..4719 | 448..346 | 215 | 80.5 | Minus |
CG31302-RE | 4994 | CG31302-RE | 4604..4685 | 332..251 | 200 | 82.9 | Minus |
CG31302.d | 5006 | CG31302.d | 4616..4697 | 332..251 | 200 | 82.9 | Minus |
CG31302-RE | 4994 | CG31302-RE | 4593..4693 | 448..348 | 190 | 79.2 | Minus |
CG31302.d | 5006 | CG31302.d | 4605..4705 | 448..348 | 190 | 79.2 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:52:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 2374965..2375681 | 108..824 | 3555 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 2374797..2374905 | 1..109 | 545 | 100 | Plus |
chr3R | 27901430 | chr3R | 2375073..2375149 | 381..457 | 190 | 83.1 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:59:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:52:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6549204..6549921 | 108..825 | 3560 | 99.7 | Plus |
3R | 32079331 | 3R | 6549036..6549144 | 1..109 | 545 | 100 | Plus |
3R | 32079331 | 3R | 6549312..6549388 | 381..457 | 190 | 83.1 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:57:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 6290035..6290752 | 108..825 | 3560 | 99.7 | Plus |
3R | 31820162 | 3R | 6289867..6289975 | 1..109 | 545 | 100 | Plus |
3R | 31820162 | 3R | 15140453..15140555 | 448..346 | 215 | 80.5 | Minus |
3R | 31820162 | 3R | 15140452..15140533 | 332..251 | 200 | 82.9 | Minus |
3R | 31820162 | 3R | 15140441..15140541 | 448..348 | 190 | 79.2 | Minus |
Blast to na_te.dros performed 2019-03-16 19:52:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 648..750 | 382..486 | 204 | 69.8 | Plus |
AT26658.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:53:09 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 2374797..2374905 | 1..109 | 100 | -> | Plus |
chr3R | 2374967..2374981 | 110..124 | 100 | == | Plus |
chr3R | 2375306..2375681 | 449..824 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:23:33 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..357 | 122..478 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:45:39 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..357 | 122..478 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:48:58 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..357 | 122..478 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:14:15 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..357 | 122..478 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:44:33 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..357 | 122..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:10:05 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..824 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:45:39 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..824 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:58 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..824 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:14:15 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..824 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:44:33 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pif2-RA | 1..824 | 1..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:53:09 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6549036..6549144 | 1..109 | 100 | -> | Plus |
3R | 6549206..6549920 | 110..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:53:09 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6549036..6549144 | 1..109 | 100 | -> | Plus |
3R | 6549206..6549920 | 110..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:53:09 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6549036..6549144 | 1..109 | 100 | -> | Plus |
3R | 6549206..6549920 | 110..824 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:58 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2374758..2374866 | 1..109 | 100 | -> | Plus |
arm_3R | 2374928..2375642 | 110..824 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:47:54 Download gff for
AT26658.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6290037..6290751 | 110..824 | 99 | | Plus |
3R | 6289867..6289975 | 1..109 | 100 | -> | Plus |
AT26658.pep Sequence
Translation from 121 to 477
> AT26658.pep
MCSPCCGSCCGPCCSPCCSPCCPPCCNDCCGSCCSPCCGPCCSPCCGPCC
SPCCSPCCTPCCTPCCTPCCKCCTPCCVPCCTPCCTPCCTPCCTPCCSPC
CGPCCSPCCSPCGGSKCK*
AT26658.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pif2-PA | 118 | CG31483-PA | 1..118 | 1..118 | 864 | 100 | Plus |
Mst84Dd-PA | 72 | CG17935-PA | 3..57 | 2..58 | 243 | 66.1 | Plus |
Mst84Dd-PA | 72 | CG17935-PA | 7..57 | 11..62 | 241 | 68.5 | Plus |
Mst84Dd-PA | 72 | CG17935-PA | 3..57 | 34..89 | 237 | 65.5 | Plus |
Mst84Dd-PA | 72 | CG17935-PA | 7..57 | 31..81 | 237 | 67.9 | Plus |
Mst84Dd-PA | 72 | CG17935-PA | 3..57 | 14..77 | 232 | 60.9 | Plus |
Mst98Ca-PA | 334 | CG11719-PA | 172..320 | 2..113 | 227 | 40.7 | Plus |
Mst84Dd-PA | 72 | CG17935-PA | 8..59 | 64..115 | 224 | 64.8 | Plus |
Mst84Dd-PA | 72 | CG17935-PA | 3..57 | 42..109 | 214 | 55.7 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 2..73 | 37..113 | 207 | 50.6 | Plus |
Mst98Ca-PA | 334 | CG11719-PA | 210..331 | 2..115 | 198 | 40.6 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 1..53 | 1..49 | 193 | 61.8 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 1..53 | 1..49 | 193 | 61.8 | Plus |
Mst87F-PB | 56 | CG17956-PB | 1..56 | 1..58 | 191 | 54.8 | Plus |
Mst87F-PA | 56 | CG17956-PA | 1..56 | 1..58 | 191 | 54.8 | Plus |
Mst98Ca-PA | 334 | CG11719-PA | 169..304 | 19..112 | 188 | 37.5 | Plus |
Muc26B-PA | 471 | CG13990-PA | 141..261 | 2..117 | 183 | 27.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 149..269 | 2..117 | 183 | 27.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 157..277 | 2..117 | 183 | 27.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 165..285 | 2..117 | 183 | 27.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 173..293 | 2..117 | 183 | 27.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 181..301 | 2..117 | 183 | 27.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 189..309 | 2..117 | 183 | 27.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 197..317 | 2..117 | 183 | 27.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 205..325 | 2..117 | 183 | 27.3 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 2..53 | 21..76 | 179 | 57.9 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 2..53 | 21..76 | 179 | 57.9 | Plus |
Muc26B-PA | 471 | CG13990-PA | 213..327 | 2..111 | 179 | 27.8 | Plus |
CG17377-PE | 207 | CG17377-PE | 93..196 | 5..105 | 176 | 34.8 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 12..73 | 2..47 | 174 | 55.6 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 2..55 | 65..117 | 173 | 57.1 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 2..55 | 65..117 | 173 | 57.1 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 14..63 | 11..58 | 171 | 56.4 | Plus |
Muc26B-PA | 471 | CG13990-PA | 229..350 | 2..117 | 170 | 27.9 | Plus |
CG17377-PD | 181 | CG17377-PD | 93..156 | 5..79 | 170 | 44 | Plus |
Mst87F-PB | 56 | CG17956-PB | 2..51 | 72..117 | 169 | 58.8 | Plus |
Mst87F-PA | 56 | CG17956-PA | 2..51 | 72..117 | 169 | 58.8 | Plus |
CG9130-PB | 517 | CG9130-PB | 236..322 | 5..76 | 169 | 44.6 | Plus |
CG9130-PA | 517 | CG9130-PA | 236..322 | 5..76 | 169 | 44.6 | Plus |
Mst98Ca-PA | 334 | CG11719-PA | 157..285 | 17..113 | 168 | 37.6 | Plus |
Mst87F-PB | 56 | CG17956-PB | 2..56 | 37..105 | 168 | 47.9 | Plus |
Mst87F-PA | 56 | CG17956-PA | 2..56 | 37..105 | 168 | 47.9 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 2..53 | 37..88 | 167 | 52.6 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 2..53 | 37..88 | 167 | 52.6 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 15..63 | 4..50 | 167 | 59.6 | Plus |
Muc26B-PA | 471 | CG13990-PA | 237..364 | 2..114 | 167 | 28.1 | Plus |
Muc26B-PA | 471 | CG13990-PA | 245..372 | 2..118 | 161 | 28.1 | Plus |
CG42758-PA | 124 | CG42758-PA | 44..124 | 2..69 | 160 | 42 | Plus |
Mst98Cb-PA | 265 | CG18396-PA | 157..265 | 17..112 | 159 | 42.3 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 15..63 | 24..70 | 158 | 55.8 | Plus |
Mst98Cb-PA | 265 | CG18396-PA | 172..265 | 2..84 | 158 | 44.3 | Plus |
Muc26B-PA | 471 | CG13990-PA | 130..237 | 14..117 | 157 | 27.8 | Plus |
CG17377-PE | 207 | CG17377-PE | 101..200 | 5..74 | 155 | 35.8 | Plus |
CG9130-PB | 517 | CG9130-PB | 234..316 | 23..112 | 155 | 39.1 | Plus |
CG9130-PA | 517 | CG9130-PA | 234..316 | 23..112 | 155 | 39.1 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 14..63 | 39..85 | 154 | 54.7 | Plus |
CG30430-PB | 51 | CG30430-PB | 3..51 | 2..50 | 154 | 54 | Plus |
CG30430-PA | 51 | CG30430-PA | 3..51 | 2..50 | 154 | 54 | Plus |
CG34167-PA | 127 | CG34167-PA | 15..105 | 6..79 | 152 | 36.6 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 17..63 | 2..42 | 150 | 58.3 | Plus |
CG30430-PB | 51 | CG30430-PB | 2..51 | 13..62 | 149 | 49 | Plus |
CG30430-PA | 51 | CG30430-PA | 2..51 | 13..62 | 149 | 49 | Plus |
CG34167-PA | 127 | CG34167-PA | 2..106 | 8..107 | 149 | 35.5 | Plus |
CG17377-PD | 181 | CG17377-PD | 81..161 | 17..114 | 145 | 37.8 | Plus |
CG30430-PB | 51 | CG30430-PB | 2..51 | 37..85 | 143 | 50 | Plus |
CG30430-PA | 51 | CG30430-PA | 2..51 | 37..85 | 143 | 50 | Plus |
CG30430-PB | 51 | CG30430-PB | 2..51 | 25..70 | 142 | 50 | Plus |
CG30430-PA | 51 | CG30430-PA | 2..51 | 25..70 | 142 | 50 | Plus |
CG30430-PB | 51 | CG30430-PB | 2..51 | 33..77 | 139 | 50 | Plus |
CG30430-PB | 51 | CG30430-PB | 2..51 | 41..89 | 139 | 48 | Plus |
CG30430-PA | 51 | CG30430-PA | 2..51 | 33..77 | 139 | 50 | Plus |
CG30430-PA | 51 | CG30430-PA | 2..51 | 41..89 | 139 | 48 | Plus |
CG42758-PA | 124 | CG42758-PA | 38..124 | 18..117 | 137 | 35 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 2..54 | 65..114 | 136 | 51.8 | Plus |
CG30430-PB | 51 | CG30430-PB | 2..50 | 72..115 | 136 | 53.1 | Plus |
CG30430-PA | 51 | CG30430-PA | 2..50 | 72..115 | 136 | 53.1 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 15..62 | 79..117 | 134 | 55.1 | Plus |
Mst84Dd-PA | 72 | CG17935-PA | 8..33 | 91..117 | 132 | 70.4 | Plus |
AT26658.hyp Sequence
Translation from 200 to 592
> AT26658.hyp
MTAAGPAAVRVADPVAAPAADPAAAPAAVLAAPPVAPLAARRAASVAHPA
ACRVAHPAAPPAALPVAPLAAVRAAVRAAAPAALLAEGQSASDPRQRIRI
RFRRQELGANATTSSSSSLESRWSPPAITS*
Sequence AT26658.hyp has no blast hits.