![]() | BDGP Sequence Production Resources |
Search the DGRC for AT26877
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 268 |
Well: | 77 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG4686-RA |
Protein status: | AT26877.pep: gold |
Sequenced Size: | 905 |
Gene | Date | Evidence |
---|---|---|
CG4686-RA | 2009-01-21 | est gleaning |
CG4686 | 2009-06-08 | Manual selection by Joe Carlson |
905 bp assembled on 2009-08-10
GenBank Submission: BT099530.1
> AT26877.complete CCAAACAAAGTTTGAGCAAACAATACACAATGTCAGTCGCTGACACCATT GAATACGTGACCCTGGGCAATCCTGTCAGCAAGATGGTAGCCTCGTCCGC ATCCGCCCTGCTCCGCACGCTTGGTCTGCGTCCCAAGAAGGTGCCGGTGC AGGAGACGAGTATGGCGGTGCTCCCTGCCGCCCACAGCTACGCGCATTCA CACGGATCACTCTATCGACTGGCCGGCTGCCATTACCACTTCATTCGGCT GGCCGGGATCGTCGGCGCGTCGGCCATCTTTATGGGCGCCTACTGCAAGT ACGTCCTGAAGGACGTCAGCGATCCCAAGGAGCAGGTGGACTCGCAGGCC TTTGCTGATGTGGCCAATCGCATCCACTTTCTGCACTCCTTTGCCATGAT GGCCATGCCTCTGGCCCACTATCCCGTATTCACTGGCACTTTGATGATTA CGGGCATGATGCTTTTCAGCGGCTGCATGTACTACCGCGCTTTGACTGGC GAGAAGCGTCTGCAACCGTACGCGACCGTCGGAGGATTCTGCCTGATGGC CGCGTGGCTGTCGCTGGTCCTGTAGGATGCGCGGGGCAGGCCACCTATCT ATATTCCATGTAGCACATGCTGAACTGCAATTTAGTGCAGAGGCAAATAA AGCTAAGCCAACTCTAACATACAACATCATCTAACATAATACAACATCAA CTAAATATGAGTTACTATATCCGCTTTTAGCCATTATTTACAATAATTAT AGTGAGGGCTTTGCAGCTAATGGAAGATACTTTTGAGTTAAATGCGTACA ATCTCTTAGTGTATATAGCAGGCTAATGTAAGTCGCTAAATCGTTATAAT GAAATAAAACAAATAAAAACGTTTTAACAAAAGAACCAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4686-RA | 1363 | CG4686-RA | 402..1290 | 1..889 | 4445 | 100 | Plus |
CG4686.a | 798 | CG4686.a | 70..798 | 123..851 | 3645 | 100 | Plus |
CG42395-RA | 752 | CG42395-RA | 306..401 | 329..424 | 360 | 91.6 | Plus |
CG42395-RA | 752 | CG42395-RA | 442..552 | 465..575 | 240 | 81 | Plus |
CG42395-RA | 752 | CG42395-RA | 171..285 | 194..308 | 230 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15690327..15690782 | 432..887 | 2280 | 100 | Plus |
chr3R | 27901430 | chr3R | 15688902..15689210 | 123..431 | 1545 | 100 | Plus |
chrX | 22417052 | chrX | 9467038..9467419 | 575..194 | 680 | 78.5 | Minus |
chr3R | 27901430 | chr3R | 15688717..15688839 | 1..123 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19866414..19866871 | 432..889 | 2290 | 100 | Plus |
3R | 32079331 | 3R | 19864989..19865297 | 123..431 | 1545 | 100 | Plus |
X | 23542271 | X | 9575323..9575704 | 575..194 | 680 | 78.5 | Minus |
3R | 32079331 | 3R | 19864804..19864926 | 1..123 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19607245..19607702 | 432..889 | 2290 | 100 | Plus |
3R | 31820162 | 3R | 19605820..19606128 | 123..431 | 1545 | 100 | Plus |
3R | 31820162 | 3R | 19605635..19605757 | 1..123 | 615 | 100 | Plus |
X | 23527363 | X | 9583572..9583667 | 424..329 | 360 | 91.6 | Minus |
X | 23527363 | X | 9583421..9583531 | 575..465 | 240 | 81 | Minus |
X | 23527363 | X | 9583688..9583802 | 308..194 | 230 | 80 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15688717..15688838 | 1..122 | 100 | -> | Plus |
chr3R | 15688902..15689210 | 123..431 | 100 | -> | Plus |
chr3R | 15690327..15690782 | 432..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4686-RA | 1..546 | 30..575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4686-RA | 1..546 | 30..575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4686-RA | 1..546 | 30..575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4686-RA | 1..546 | 30..575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4686-RA | 348..1164 | 1..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4686-RA | 348..1234 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4686-RA | 309..1195 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4686-RA | 309..1195 | 1..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19864804..19864925 | 1..122 | 100 | -> | Plus |
3R | 19864989..19865297 | 123..431 | 100 | -> | Plus |
3R | 19866414..19866869 | 432..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19864804..19864925 | 1..122 | 100 | -> | Plus |
3R | 19864989..19865297 | 123..431 | 100 | -> | Plus |
3R | 19866414..19866869 | 432..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19864804..19864925 | 1..122 | 100 | -> | Plus |
3R | 19864989..19865297 | 123..431 | 100 | -> | Plus |
3R | 19866414..19866869 | 432..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15690526..15690647 | 1..122 | 100 | -> | Plus |
arm_3R | 15690711..15691019 | 123..431 | 100 | -> | Plus |
arm_3R | 15692136..15692591 | 432..887 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19605820..19606128 | 123..431 | 100 | -> | Plus |
3R | 19607245..19607700 | 432..887 | 100 | Plus | |
3R | 19605635..19605756 | 1..122 | 100 | -> | Plus |
Translation from 2 to 574
> AT26877.hyp KQSLSKQYTMSVADTIEYVTLGNPVSKMVASSASALLRTLGLRPKKVPVQ ETSMAVLPAAHSYAHSHGSLYRLAGCHYHFIRLAGIVGASAIFMGAYCKY VLKDVSDPKEQVDSQAFADVANRIHFLHSFAMMAMPLAHYPVFTGTLMIT GMMLFSGCMYYRALTGEKRLQPYATVGGFCLMAAWLSLVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4686-PB | 181 | CG4686-PB | 1..181 | 10..190 | 936 | 100 | Plus |
CG4686-PA | 181 | CG4686-PA | 1..181 | 10..190 | 936 | 100 | Plus |
CG42395-PD | 179 | CG42395-PD | 1..179 | 12..190 | 673 | 69.8 | Plus |
Translation from 2 to 574
> AT26877.pep KQSLSKQYTMSVADTIEYVTLGNPVSKMVASSASALLRTLGLRPKKVPVQ ETSMAVLPAAHSYAHSHGSLYRLAGCHYHFIRLAGIVGASAIFMGAYCKY VLKDVSDPKEQVDSQAFADVANRIHFLHSFAMMAMPLAHYPVFTGTLMIT GMMLFSGCMYYRALTGEKRLQPYATVGGFCLMAAWLSLVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17622-PA | 181 | GF17622-PA | 1..181 | 10..190 | 771 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23549-PA | 181 | GG23549-PA | 1..181 | 10..190 | 880 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16289-PA | 176 | GH16289-PA | 1..176 | 10..190 | 595 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4686-PB | 181 | CG4686-PB | 1..181 | 10..190 | 936 | 100 | Plus |
CG4686-PA | 181 | CG4686-PA | 1..181 | 10..190 | 936 | 100 | Plus |
CG42395-PD | 179 | CG42395-PD | 1..179 | 12..190 | 673 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22430-PA | 178 | GI22430-PA | 1..178 | 10..190 | 664 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12204-PA | 179 | GL12204-PA | 3..179 | 14..190 | 662 | 69.7 | Plus |
Dper\GL13195-PA | 183 | GL13195-PA | 1..183 | 10..190 | 400 | 45.3 | Plus |
Dper\GL25373-PA | 155 | GL25373-PA | 1..152 | 10..160 | 369 | 47.7 | Plus |
Dper\GL14894-PA | 181 | GL14894-PA | 4..180 | 13..189 | 320 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18356-PA | 179 | GA18356-PA | 3..179 | 14..190 | 661 | 69.1 | Plus |
Dpse\GA22642-PA | 182 | GA22642-PA | 1..182 | 10..190 | 479 | 49.7 | Plus |
Dpse\GA26480-PA | 181 | GA26480-PA | 4..180 | 13..189 | 354 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26868-PA | 180 | GM26868-PA | 1..180 | 10..190 | 915 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19318-PA | 180 | GD19318-PA | 1..180 | 10..190 | 915 | 96.7 | Plus |
Dsim\GD16056-PA | 181 | GD16056-PA | 1..181 | 10..190 | 690 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10993-PA | 178 | GJ10993-PA | 1..178 | 10..190 | 630 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22810-PA | 183 | GK22810-PA | 1..183 | 10..190 | 754 | 75.4 | Plus |