BDGP Sequence Production Resources |
Search the DGRC for AT27305
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 273 |
Well: | 5 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG31874-RA |
Protein status: | AT27305.pep: gold |
Sequenced Size: | 1642 |
Gene | Date | Evidence |
---|---|---|
CG31874 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31874 | 2004-03-31 | Blastp of sequenced clone |
CG31874 | 2008-04-29 | Release 5.5 accounting |
CG31874 | 2008-08-15 | Release 5.9 accounting |
CG31874 | 2008-12-18 | 5.12 accounting |
1642 bp (1642 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012504
> AT27305.complete CTTTTCCTGGCCTGTACTTTTCGGCCTAAATATTTCATTTCGTAACACAT ATACACATTAAAATTTTCCAAAATGTCTTTCGATCAGAAGGAGATTTTCA GTTTGATGTACAAACTGGCTCGGCTAATAGTGCCGGATACTCGAGTTGAA TATGATTCGATGGGTGCCGTGCACATTCCTCTCGATCGAATGTTCGGTCC GCAAACCATGAGATCCCTGATGAAATTTCCAATTGGCGGAGTTGAGGAAC GAATGCCACGACCCCTAATAAAAGCCCTGGGCATAGTGAAGAAATCAGCT GCGGAGACGAACAAAATCCATTGTCTGGAGGAGCATCTATGCGATGCCAT TTCCAAGGCCTGCGATGATGTTATATCGGGCAAACTCTATGACGAGGAAC ACTTTCCGTTGGTTATATGGCAGGATGGAAGCGGCGAGCACACAAACATG AACGTAAACGAGGTTATATGCAATCGAGCCATCGAAATTCTGGGCGGTCA GATGGGCTCCAAGGAGCCGGTGGATCCCAATGAACATGTCAACATGGCGC AAAGTTCCCATGACACCTTCTCGACAGCCGTGCGCATCGCCGTGGCCATG CAGTTGCAGGAGACGCTGTATCCCAGCTTAAGGACCTTTATTGATTTGCT GGGCAAGAAGTCGAACGATTGGATGGATTTGATCAAGATTGGTAGAACGC ATCTGATGGACGCAGTTCCTCTGTCCCTCGGCCAGGAGTTCAGTGGCTAT CAGCAGCAACTTGTGAACGGAAGGACGCGATTGGACTGTGCCATGTGCCG ATTGTATCAGTTGCCCATGGGCGGCACCAGTGTGGGCACCAAAGTGGACA CCAAGGCGGAATATTCTGCGCAGTGCATCAAGCGTATAGCCGAGCTAACA TTCCTACCCTTTGTCGAGTCCCCGAACTTTTTTGAATCCATCTCCGCCTG CGATTGCCTGGTGGAACTGCACGGTGAACTCAACACGATTGCAGCGAGTG TGATGAAGATAGCGAATGATATACGATTCCTTGGATCGGGACCACGTTGC GGATTTGGTGAACTACATCTGCCGGAGAACGAACCAGGTAGTTCCATAAT GCCCGGCAAAGTGAATCCCACGCAATGCGAGGCCATGTCCATGATCTGTG CCCAGGTGATGGGCAACCATGTGGCCGTCTCCATGGGTGGTTCCTCTGGC CACTTTCAGCTGAACACCTTTATGCCCATGATTGCCTCCAATGTTTTGCG CTCGATTACACTTTTGGGCGATGGCATGAAGTCCTTTTGCACCAATTGCC TCGAGGGCATCGAGCCCAATAGGAGCAAGATTGGTAGCATCGTCAAGGAG TCCCTGATGCTGGTCACTGCCCTCAGTCCACACATTGGCTACGAACGATC CGCTGCGATCGCCAAGGCAGCGCATCACAATGGAACCACTTTGGAACAGG AGGCCATACTTGATGGCATTCAACGGGAGGACTTCAGGGAGTGGGTGCAG CCCAGCAAGATGCTGGGTCCCGAATAGTCGAAATGGCCACAAAACAGTAT CATAATTTAAATAAATTGTTTCAATTATTATGTCGAGCTTTAAAATTTAA TAAATGCGGTCAATTGGCTCTGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31874-RA | 1623 | CG31874-RA | 5..1623 | 1..1619 | 8095 | 100 | Plus |
CG6140-RA | 1740 | CG6140-RA | 1011..1254 | 1001..1244 | 575 | 82.3 | Plus |
CG6140.a | 1811 | CG6140.a | 1082..1325 | 1001..1244 | 575 | 82.3 | Plus |
CG6140-RA | 1740 | CG6140-RA | 455..608 | 445..598 | 215 | 75.9 | Plus |
CG6140.a | 1811 | CG6140.a | 526..679 | 445..598 | 215 | 75.9 | Plus |
CG6140-RA | 1740 | CG6140-RA | 1349..1450 | 1339..1440 | 165 | 77.4 | Plus |
CG6140.a | 1811 | CG6140.a | 1420..1521 | 1339..1440 | 165 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10188704..10190068 | 1623..259 | 6825 | 100 | Minus |
chr2L | 23010047 | chr2L | 10190123..10190380 | 258..1 | 1290 | 100 | Minus |
chr3L | 24539361 | chr3L | 11454880..11455123 | 1244..1001 | 575 | 82.4 | Minus |
chrX | 22417052 | chrX | 6573223..6573534 | 946..1257 | 540 | 78.2 | Plus |
chrX | 22417052 | chrX | 6575162..6575430 | 946..1214 | 520 | 79.6 | Plus |
chr3L | 24539361 | chr3L | 11455526..11455679 | 598..445 | 215 | 76 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10189819..10191184 | 1624..259 | 6830 | 100 | Minus |
2L | 23513712 | 2L | 10191239..10191496 | 258..1 | 1290 | 100 | Minus |
3L | 28110227 | 3L | 11464106..11464349 | 1244..1001 | 575 | 82.4 | Minus |
X | 23542271 | X | 6681051..6681362 | 946..1257 | 540 | 78.2 | Plus |
X | 23542271 | X | 6682989..6683237 | 946..1194 | 510 | 80.3 | Plus |
3L | 28110227 | 3L | 11464752..11464905 | 598..445 | 215 | 76 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10189819..10191184 | 1624..259 | 6830 | 100 | Minus |
2L | 23513712 | 2L | 10191239..10191496 | 258..1 | 1290 | 100 | Minus |
3L | 28103327 | 3L | 11457206..11457449 | 1244..1001 | 575 | 82.3 | Minus |
X | 23527363 | X | 6689149..6689460 | 946..1257 | 540 | 78.2 | Plus |
X | 23527363 | X | 6691087..6691335 | 946..1194 | 510 | 80.3 | Plus |
3L | 28103327 | 3L | 11457852..11458005 | 598..445 | 215 | 75.9 | Minus |
3L | 28103327 | 3L | 11456955..11457056 | 1440..1339 | 165 | 77.4 | Minus |
X | 23527363 | X | 6688673..6688799 | 470..596 | 155 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 4839..4930 | 1611..1522 | 157 | 66.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10188704..10190068 | 259..1623 | 100 | <- | Minus |
chr2L | 10190123..10190380 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1455 | 73..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1455 | 73..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1455 | 73..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1455 | 73..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1455 | 73..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1527 | 1..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1623 | 1..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1623 | 1..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1527 | 1..1527 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31874-RA | 1..1623 | 1..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10189820..10191184 | 259..1623 | 100 | <- | Minus |
2L | 10191239..10191496 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10189820..10191184 | 259..1623 | 100 | <- | Minus |
2L | 10191239..10191496 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10189820..10191184 | 259..1623 | 100 | <- | Minus |
2L | 10191239..10191496 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10189820..10191184 | 259..1623 | 100 | <- | Minus |
arm_2L | 10191239..10191496 | 1..258 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10189820..10191184 | 259..1623 | 100 | <- | Minus |
2L | 10191239..10191496 | 1..258 | 100 | Minus |
Translation from 72 to 1526
> AT27305.pep MSFDQKEIFSLMYKLARLIVPDTRVEYDSMGAVHIPLDRMFGPQTMRSLM KFPIGGVEERMPRPLIKALGIVKKSAAETNKIHCLEEHLCDAISKACDDV ISGKLYDEEHFPLVIWQDGSGEHTNMNVNEVICNRAIEILGGQMGSKEPV DPNEHVNMAQSSHDTFSTAVRIAVAMQLQETLYPSLRTFIDLLGKKSNDW MDLIKIGRTHLMDAVPLSLGQEFSGYQQQLVNGRTRLDCAMCRLYQLPMG GTSVGTKVDTKAEYSAQCIKRIAELTFLPFVESPNFFESISACDCLVELH GELNTIAASVMKIANDIRFLGSGPRCGFGELHLPENEPGSSIMPGKVNPT QCEAMSMICAQVMGNHVAVSMGGSSGHFQLNTFMPMIASNVLRSITLLGD GMKSFCTNCLEGIEPNRSKIGSIVKESLMLVTALSPHIGYERSAAIAKAA HHNGTTLEQEAILDGIQREDFREWVQPSKMLGPE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14135-PA | 2594 | GF14135-PA | 938..1359 | 63..484 | 1662 | 72.7 | Plus |
Dana\GF25158-PA | 466 | GF25158-PA | 5..465 | 23..483 | 1646 | 63.8 | Plus |
Dana\GF21422-PA | 498 | GF21422-PA | 31..498 | 17..484 | 1598 | 61.2 | Plus |
Dana\GF21423-PA | 505 | GF21423-PA | 45..505 | 24..484 | 1579 | 61.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13920-PA | 470 | GG13920-PA | 8..469 | 22..483 | 1646 | 64.3 | Plus |
Dere\GG19604-PA | 495 | GG19604-PA | 28..495 | 17..484 | 1607 | 61.6 | Plus |
Dere\GG19605-PA | 503 | GG19605-PA | 43..503 | 24..484 | 1600 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16362-PA | 489 | GH16362-PA | 1..483 | 1..483 | 1693 | 64 | Plus |
Dgri\GH16363-PA | 475 | GH16363-PA | 14..474 | 23..483 | 1610 | 62.7 | Plus |
Dgri\GH24716-PA | 496 | GH24716-PA | 29..496 | 17..484 | 1594 | 60.1 | Plus |
Dgri\GH24717-PA | 488 | GH24717-PA | 28..487 | 24..483 | 1575 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fum4-PA | 484 | CG31874-PA | 1..484 | 1..484 | 2525 | 100 | Plus |
Fum3-PB | 470 | CG6140-PB | 8..469 | 22..483 | 1591 | 64.7 | Plus |
Fum3-PA | 470 | CG6140-PA | 8..469 | 22..483 | 1591 | 64.7 | Plus |
Fum1-PA | 495 | CG4094-PA | 28..495 | 17..484 | 1531 | 61.6 | Plus |
Fum2-PA | 503 | CG4095-PA | 43..503 | 24..484 | 1527 | 61.4 | Plus |
Fum1-PB | 467 | CG4094-PB | 7..467 | 24..484 | 1526 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21815-PA | 502 | GI21815-PA | 42..502 | 24..484 | 1590 | 61.6 | Plus |
Dmoj\GI21814-PA | 496 | GI21814-PA | 29..496 | 17..484 | 1586 | 60.6 | Plus |
Dmoj\GI11555-PA | 467 | GI11555-PA | 6..466 | 23..483 | 1580 | 61 | Plus |
Dmoj\GI11554-PA | 485 | GI11554-PA | 1..480 | 1..481 | 1565 | 59.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19182-PA | 2565 | GL19182-PA | 949..1370 | 63..484 | 1732 | 74.2 | Plus |
Dper\GL24850-PA | 469 | GL24850-PA | 8..468 | 23..483 | 1673 | 65.7 | Plus |
Dper\GL13348-PA | 537 | GL13348-PA | 153..510 | 24..381 | 1232 | 62.8 | Plus |
Dper\GL15602-PA | 264 | GL15602-PA | 1..264 | 222..484 | 904 | 63.3 | Plus |
Dper\GL20991-PA | 174 | GL20991-PA | 1..174 | 311..484 | 707 | 72.4 | Plus |
Dper\GL13348-PA | 537 | GL13348-PA | 29..142 | 17..131 | 371 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25872-PA | 2547 | GA25872-PA | 949..1370 | 63..484 | 1727 | 73.7 | Plus |
Dpse\GA23530-PA | 469 | GA23530-PA | 8..468 | 23..483 | 1673 | 65.7 | Plus |
Dpse\GA22866-PA | 496 | GA22866-PA | 29..496 | 17..484 | 1607 | 61 | Plus |
Dpse\GA17953-PA | 500 | GA17953-PA | 40..500 | 24..484 | 1602 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12511-PA | 495 | GM12511-PA | 28..495 | 17..484 | 1608 | 61.6 | Plus |
Dsec\GM12512-PA | 499 | GM12512-PA | 39..499 | 24..484 | 1587 | 61.2 | Plus |
Dsec\GM24753-PA | 410 | GM24753-PA | 152..409 | 226..483 | 967 | 66.7 | Plus |
Dsec\GM24753-PA | 410 | GM24753-PA | 8..138 | 22..152 | 440 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22301-PA | 1702 | GD22301-PA | 1..361 | 12..372 | 1922 | 98.1 | Plus |
Dsim\GD12804-PA | 148 | GD12804-PA | 29..147 | 360..483 | 358 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11232-PA | 484 | GJ11232-PA | 1..483 | 1..483 | 1792 | 67.5 | Plus |
Dvir\GJ11233-PA | 476 | GJ11233-PA | 13..475 | 21..483 | 1631 | 63.5 | Plus |
Dvir\GJ16987-PA | 496 | GJ16987-PA | 29..496 | 17..484 | 1604 | 60.8 | Plus |
Dvir\GJ16988-PA | 500 | GJ16988-PA | 40..500 | 24..484 | 1583 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15449-PA | 500 | GK15449-PA | 40..500 | 24..484 | 1598 | 62.1 | Plus |
Dwil\GK15460-PA | 455 | GK15460-PA | 1..455 | 30..484 | 1539 | 63.3 | Plus |
Dwil\GK17051-PA | 455 | GK17051-PA | 7..446 | 24..475 | 1099 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20216-PA | 470 | GE20216-PA | 8..469 | 22..483 | 1650 | 64.5 | Plus |
Dyak\GE16764-PA | 495 | GE16764-PA | 28..495 | 17..484 | 1607 | 61.6 | Plus |
Dyak\GE16765-PA | 500 | GE16765-PA | 40..500 | 24..484 | 1581 | 61.2 | Plus |
Translation from 72 to 1526
> AT27305.hyp MSFDQKEIFSLMYKLARLIVPDTRVEYDSMGAVHIPLDRMFGPQTMRSLM KFPIGGVEERMPRPLIKALGIVKKSAAETNKIHCLEEHLCDAISKACDDV ISGKLYDEEHFPLVIWQDGSGEHTNMNVNEVICNRAIEILGGQMGSKEPV DPNEHVNMAQSSHDTFSTAVRIAVAMQLQETLYPSLRTFIDLLGKKSNDW MDLIKIGRTHLMDAVPLSLGQEFSGYQQQLVNGRTRLDCAMCRLYQLPMG GTSVGTKVDTKAEYSAQCIKRIAELTFLPFVESPNFFESISACDCLVELH GELNTIAASVMKIANDIRFLGSGPRCGFGELHLPENEPGSSIMPGKVNPT QCEAMSMICAQVMGNHVAVSMGGSSGHFQLNTFMPMIASNVLRSITLLGD GMKSFCTNCLEGIEPNRSKIGSIVKESLMLVTALSPHIGYERSAAIAKAA HHNGTTLEQEAILDGIQREDFREWVQPSKMLGPE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31874-PA | 484 | CG31874-PA | 1..484 | 1..484 | 2525 | 100 | Plus |
CG6140-PB | 470 | CG6140-PB | 8..469 | 22..483 | 1591 | 64.7 | Plus |
CG6140-PA | 470 | CG6140-PA | 8..469 | 22..483 | 1591 | 64.7 | Plus |
l(1)G0255-PA | 495 | CG4094-PA | 28..495 | 17..484 | 1531 | 61.6 | Plus |
l(1)G0255-PB | 467 | CG4094-PB | 7..467 | 24..484 | 1526 | 62.1 | Plus |