Clone AT27322 Report

Search the DGRC for AT27322

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:273
Well:22
Vector:pOTB7
Associated Gene/TranscriptCG15395-RB
Protein status:AT27322.pep: gold
Preliminary Size:828
Sequenced Size:1119

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15395 2002-01-01 Sim4 clustering to Release 2
CG15395 2002-04-21 Blastp of sequenced clone
CG15395 2003-01-01 Sim4 clustering to Release 3
CG15395 2008-04-29 Release 5.5 accounting
CG15395 2008-08-15 Release 5.9 accounting
CG15395 2008-12-18 5.12 accounting

Clone Sequence Records

AT27322.complete Sequence

1119 bp (1119 high quality bases) assembled on 2002-04-21

GenBank Submission: AY113306

> AT27322.complete
AATAGGTCGTATATGATAATAATGTCTGATTCGAAAGCGGAGTACAACTG
GGGCGATTTGGGTGTGGAGTCGATGGAGAGCTTTGCATCCGCAATAAGTG
AGGAGTTTCCCAGACTCCAACAGCATCGTGAGCAGGTGGAGCAGCTGCAG
CGACGCGGCAGGCAGATTGTCAGCCAGGCCCAGCAGCATTCTCAGGTTTT
GGTCTCCAATCTGTTCAAGAATATGAAGATCTCGTGCGAGAAGCCCACAT
TTCCACCGCAGGTGTCGGCTCCAAAGGCCTATCGCTTCAAGGACATCTAT
TCCAGTCGCAAGGATCAGCTGATCCGCGAATGCAGGGAGCAGGAGCGCAA
GCAGCGCGAGTTCCACAGCCGACCGATGCCCGACTTTCGTCAGGCGCACT
CACGTCAGTCCTCCAGGGTCGTTGTGCATCGGATCACCTGCCCCACGACC
CCCAATGTGCTCAAGAATTCGCGTGAAATGGAGGAAAAGCGCCGCTTGCG
GGTGGAGCAGCTGCAGAGGGAGCGCGAGCTGGAGTCCCAACTTCACAAAA
TGCAGGCTCCTAGGGCCAAACCGATTCCGCAGAGCAGCCGTCAGCCCTTG
AAGTCCTCGAACCGACCTTCCTCCGCAGTTCCAGCGGCAAGGGTGAAGGT
CGAGCCCTTCAACTTGTCCGCCGAATCGCGCGTCCAGCAGCGGCGCATTT
TCAACATCCAGACGTCCAAGGCGCAGGAGGCGCGGCGCCGCGAGCTGGAG
GATCAGCGCCAACGGGCGGAACGGGAGGCCTACCAAAAGCTGCGCCAACG
AACCACGTTCCGCGCCAGACCCAATCCATTTTCGCAGACCGCACGTTGAC
CTGGGGGATTTCCCTCTATTCTGGTTTTGCTTTTCTTTTTTTCATTTCCT
TTCGGGCTTTCATTTCGTTTGGATTTTCGTTGCAAATTTGTTTTGTTCGA
AGAAATTTAATTACTATAATCACCAGCAGGCAACCGCAAACACACTGTGC
GGGCTAAATGAATAGTACCTCCTAACTGTATAAACTTGCATTAAAAAATC
ATGACACTGGGCAATGCTTCAATCGGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

AT27322.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-RB 1243 CG15395-RB 153..1217 1..1065 5295 99.8 Plus
CG15395.a 1243 CG15395.a 153..1217 1..1065 5295 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:32:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2610292..2611093 275..1076 4010 100 Plus
chr2L 23010047 chr2L 2609962..2610238 1..277 1385 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:00:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2610476..2611266 275..1065 3925 99.7 Plus
2L 23513712 2L 2610146..2610422 1..277 1385 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:44:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2610476..2611266 275..1065 3925 99.7 Plus
2L 23513712 2L 2610146..2610422 1..277 1385 100 Plus
Blast to na_te.dros performed on 2019-03-15 19:32:19 has no hits.

AT27322.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:33:07 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2609962..2610237 1..276 100 -> Plus
chr2L 2610294..2611093 277..1076 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:25:12 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..828 22..849 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:00:39 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..828 22..849 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:53:31 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..828 22..849 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:54:01 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..828 22..849 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:20:08 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..828 22..849 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:41:46 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..1065 1..1065 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:00:38 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..1065 1..1065 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:53:31 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 153..1217 1..1065 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:54:01 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..1065 1..1065 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:20:08 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 153..1217 1..1065 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:33:07 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2610146..2610421 1..276 100 -> Plus
2L 2610478..2611266 277..1065 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:33:07 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2610146..2610421 1..276 100 -> Plus
2L 2610478..2611266 277..1065 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:33:07 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2610146..2610421 1..276 100 -> Plus
2L 2610478..2611266 277..1065 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:53:31 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2610146..2610421 1..276 100 -> Plus
arm_2L 2610478..2611266 277..1065 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:26:10 Download gff for AT27322.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2610146..2610421 1..276 100 -> Plus
2L 2610478..2611266 277..1065 99   Plus

AT27322.hyp Sequence

Translation from 1 to 848

> AT27322.hyp
NRSYMIIMSDSKAEYNWGDLGVESMESFASAISEEFPRLQQHREQVEQLQ
RRGRQIVSQAQQHSQVLVSNLFKNMKISCEKPTFPPQVSAPKAYRFKDIY
SSRKDQLIRECREQERKQREFHSRPMPDFRQAHSRQSSRVVVHRITCPTT
PNVLKNSREMEEKRRLRVEQLQRERELESQLHKMQAPRAKPIPQSSRQPL
KSSNRPSSAVPAARVKVEPFNLSAESRVQQRRIFNIQTSKAQEARRRELE
DQRQRAEREAYQKLRQRTTFRARPNPFSQTAR*

AT27322.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-PB 275 CG15395-PB 1..275 8..282 1397 100 Plus
mei-38-PA 325 CG14781-PA 193..319 89..250 240 33.3 Plus
mei-38-PB 326 CG14781-PB 194..320 89..250 240 33.3 Plus
CG5781-PA 266 CG5781-PA 74..255 91..280 175 26.9 Plus

AT27322.pep Sequence

Translation from 12 to 848

> AT27322.pep
MIIMSDSKAEYNWGDLGVESMESFASAISEEFPRLQQHREQVEQLQRRGR
QIVSQAQQHSQVLVSNLFKNMKISCEKPTFPPQVSAPKAYRFKDIYSSRK
DQLIRECREQERKQREFHSRPMPDFRQAHSRQSSRVVVHRITCPTTPNVL
KNSREMEEKRRLRVEQLQRERELESQLHKMQAPRAKPIPQSSRQPLKSSN
RPSSAVPAARVKVEPFNLSAESRVQQRRIFNIQTSKAQEARRRELEDQRQ
RAEREAYQKLRQRTTFRARPNPFSQTAR*

AT27322.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:47:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20593-PA 283 GF20593-PA 1..283 4..278 552 48.4 Plus
Dana\GF20913-PA 261 GF20913-PA 130..258 84..245 183 33.3 Plus
Dana\GF15659-PA 258 GF15659-PA 75..255 86..273 182 30.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:47:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24867-PA 264 GG24867-PA 1..264 4..278 1103 79.3 Plus
Dere\GG12862-PA 315 GG12862-PA 188..261 87..160 206 51.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:47:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11157-PA 346 GH11157-PA 1..280 4..274 354 40.3 Plus
Dgri\GH17950-PA 311 GH17950-PA 179..294 86..231 207 34.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-PB 275 CG15395-PB 1..275 4..278 1397 100 Plus
mei-38-PC 347 CG14781-PC 193..346 85..273 324 36.5 Plus
mei-38-PA 325 CG14781-PA 193..319 85..246 240 33.3 Plus
mei-38-PB 326 CG14781-PB 194..320 85..246 240 33.3 Plus
CG5781-PA 266 CG5781-PA 74..255 87..276 175 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:47:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17863-PA 289 GI17863-PA 1..279 4..273 415 42.6 Plus
Dmoj\GI16488-PA 375 GI16488-PA 233..346 86..231 170 32.9 Plus
Dmoj\GI17108-PA 261 GI17108-PA 69..257 85..276 148 28.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:47:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26567-PA 212 GL26567-PA 1..166 4..234 353 40.3 Plus
Dper\GL14260-PA 364 GL14260-PA 181..315 85..245 161 31.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:47:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13699-PA 210 GA13699-PA 1..210 4..278 484 43.8 Plus
Dpse\GA19123-PA 269 GA19123-PA 75..259 86..276 187 30 Plus
Dpse\GA22721-PA 334 GA22721-PA 181..314 85..244 168 32.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:47:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18351-PA 258 GM18351-PA 1..258 4..278 1175 86.5 Plus
Dsec\GM19145-PA 325 GM19145-PA 195..318 87..245 204 32.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:47:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23164-PA 274 GD23164-PA 1..274 4..278 1328 93.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17363-PA 302 GJ17363-PA 1..291 4..273 479 42.9 Plus
Dvir\GJ16033-PA 326 GJ16033-PA 189..316 84..245 167 31.9 Plus
Dvir\GJ16146-PA 263 GJ16146-PA 71..259 86..276 165 31.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19360-PA 180 GK19360-PA 3..176 95..274 280 41.5 Plus
Dwil\GK16093-PA 367 GK16093-PA 196..350 84..247 226 36.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18165-PA 276 GE18165-PA 1..276 4..278 1141 82.3 Plus
Dyak\GE16693-PA 319 GE16693-PA 192..312 87..245 219 34 Plus