Clone AT27333 Report

Search the DGRC for AT27333

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:273
Well:33
Vector:pOTB7
Associated Gene/TranscriptCG14651-RB
Protein status:AT27333.pep: gold
Sequenced Size:3518

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14651 2003-01-01 Sim4 clustering to Release 3
CG14651 2005-05-04 Blastp of sequenced clone
CG14651 2008-04-29 Release 5.5 accounting
CG14651 2008-08-15 Release 5.9 accounting
CG14651 2008-12-18 5.12 accounting

Clone Sequence Records

AT27333.complete Sequence

3518 bp (3518 high quality bases) assembled on 2005-05-04

GenBank Submission: BT025177

> AT27333.complete
CCTCGTGCCGATTTCATATGGATCCGGAGAACTTAGAGGTGGGACAAAAT
TATGAAGGTTCCCAGGAATTCGATGAGAGCAGCACCAGCTCAATTAGCAA
CAAGGGCCCGGATGACAGTCAATTCAAGCGTGAGGCTGAGAAAGCTATTT
GCATCATGCCGCCCCGACCGGGAACGACTATGATGAACTATCAGGAGCTA
TATATTCCGCGGAATCAGCTTACTGATGTATATTACCCCATTCAGGAGGC
CCAACGATGGCTCACTCTGATGGACAAGATGGGCAAGGCACACCGTTTTC
CGCTGCCCACGATCCTGCCGAAAGTGATCCAGACCCGCTACGTGCCAAAG
CGGCATCTTCCAAAGGACGTCGAAGTGGATCGGAGGCGTCGTCAGTACCA
GAAGATTAACTTGGTGAATGAGCTGGCCAAGGCGGGCCTCACTGACGACG
TGCTGCAGCCCACCGAGGAGCAGTATAATGTAATGTCCGAGTTCGCCTTC
CCACACAAGTTTCCCCTGAGCTACTTCGACGACAGCAACTTTGACATCAA
CTCTCCGGCGGCCTGGTTTGAGCTGGGAGTTGTCGGAGATGCGCACTACC
CGCTTCCGGCGAAGGCGTACCTGCCTTACAACCAAAGCCTGCTGAACTGC
CAGTGGGGCATGGCAGCTGTTACCGCGCACCACGAGGACTCCGACCTCTG
GACGCTTCTATCGCTGGAGGACGGATGCACCTACACGGTACCCAAGCTTC
AGTTCATGTTCATGGCTGAGGACCCGCACAAGTACATCAAGCGGCTGCAG
GCCGCTGTTCACGAGCGGCACAAGGGGGAGCAGCTTATGTTGATGGAGCT
GATCGTGGATTGTGTCCTGCACGAGGACATTGAGTCCACCGTGTTTTATA
GCTTTAAGCCCATCGAATCGGTCCTGCAGGCGGCTAAGGTGTCTGAGCAG
TGCAAAAGACGACTACGCTCCGAGGTGAACTTGGTGTTCGAGCGCCTAAT
GGCCCTATACGAGCTGGAGCAGTTTATCCTTAAGATGCCCAAGGAATTTC
CCCAGTTTCGGAACATCAACCTCAAGGAATTTCTGCCCCGGTCTTTCGCC
GTGGACGTCTCCGGGAAGGAGCGTCTTGAACTGCAGGCCCTTGGCATAAC
CATGCAGGAGAAGCGGTACGACTACCTGAAGGCCAGTCTGTTTTATTGCG
TCGGTGGCATCGAGGCCATGGCCGGAGTGGCCATCGAGTGCCAGTACATC
GAAACACTTTCGATCTTCATCTGCAGCTTTAGCAAGCCCCTGGCGCTAGT
GGACTTCCTGCAAGCGCAGGAGGCGCATAGCGACAACGTGGCCACGTTTC
TTAAAGTCTATTGGCCGCAACAGCTGACAACGGTCATCACCGTGGTCCTC
CGAGCCCTGGGAAAGGGCTGGCTGGACATCTCCCTCAACACCTGGACGGT
CTATCTCATGTGCAAGATCTCGCGGTTTATACTGCAGGTCAAGTTCCGTA
TGCAAGAGTCAATGGAGGTGCTGCTCGAGACGTCGCTGATGAACTTCTCG
CATTTCGTTTGCGACCCCTGCCTGCAATTCCTTGAACTGAAGTCCAACTA
CAAGTGGACCAATAACTACATCGACACCGAGTTCCCCTTTCAAAAACCTG
TATTCGCCATGACCCTTGGCATCAGCGAGGATCGCAAGGTGTTTTACTCC
ACTGACCCGGATGAGTTCCAGCCGGGGCTGGTCGAGATCTTTAAGAAGTG
CCTGGAGAAATCGTCTGGAGTAAGATGCATTGATGGGTCTGTCATGAGTT
TTTTGAAGTTCGCCCCTAACCTGTATATCCTGACGGTGGAGCTTATCGAG
GATAGGTTCCTGAGGGAGAATGAGCTTCTGAAGAACTGCTACGCCAAGGC
GGTGCTGCCTCTCAGGGCGTACGCCCGACTCTACGAGAGATTCATCGACT
TTTACCTTCTCAATGTAAACACCTATATGCAGGCATATGCTCAAGCCCAC
AAGCCGTCCTCGGAGGTAAAGCGGGACATTCTGGAAAACAAGCGATTGAA
GGAGGAACTGCGCGAAATCCTGCCTGCCTTTATTACTATTGGACCGTTTT
ACATAAACGTGGATACAATGAAGCAGTTCATGATAAAGAAGCGCATTGAA
GTCGTGAGACGGATATTCGAGTACTATGTGGACCGAATGTATGAGACGAA
TGAGGTTTTGCTGGACCGTTGCCTGGAGATGTTCCGCAGAATCGCCGAGC
GTCCGATTAGCATTGAACACCTGTACGAGATTCGCGACTTTGCGCAGACT
GTTCCGGATTTAGTGGATGAGCTTAAGGCTGACATTCAGGTCATGTGGCT
GGAGTACGACCTGCTGGATAGCTTCTTTTACAACCTGAGTGACCACCAGT
TCGCCATGAAGTGGAACGTGTACGCATGGCCGCACCAGATAATGGTGCGA
TTATCGACATTGAAGGACGAGCAGAAGGTGGACATCGAGGACTTTCTCCG
CCTGCACGCCAGCGAGTGCCAAGCGTTCGAGGAGCGTCTGGAGTCCCTCA
ACGACGAGGTGCAGGCCTACTCACTGGCGTTTAACACGAACCGCGCACAG
GAGACGTCAGTGGACATTAAGAAGACGTGGGCTCTGATTAAGGAGCTCGA
GAAGGTCAGCCAAACTCTGCAATTTCGGCAGGAGCTATTTGAGCTGGAGC
CACTCTCTGTTGAGTTCCTGGAGAGCATAATCGCTAGCTTCACTCCCTAC
AAGAACCTGTGGTACGGCTGCGCCAACTTTCTGAAGCTCGAGGACGCTAC
CTTGGGCAACCCGATAGCGCAACTGGACTTGGAAGATGTGTGGAATAACT
TGATGAGGCTTCGCGACGAACTCAACGAGTCAATGAAAATATTTCATGAA
AAAGTCGAGATCATGGATGTGGCCAAAACGTTCATTGCAAAGATCGACGA
TTTCGTTCCAGTTTACAACAGCATTAAGGATATCCGAAATGAGAACTGGA
TGTACATTCACTGGCAAGAACTAAGCGCGATAACTGGCCAGGAGATTAAG
TACTCAGTGGCGATGAACTATCAGTACCTCATTCGTAAGGGCATCTTGGA
CGTCCTGCCCGAAGTCCACATCATCTCGGAGAAGGCCAACAACGAGGCGG
AGGAAATTCGGCGAGCCATCGAGGAAGAAGAGAGGCGAAAGCAGGCCGAA
TTGAATGCTATGTTGTTGCGCAAACAGCTCCGCAAGTGTCGCCGGGATAT
ACTATAGTTTGTTGTTGAAATCGTTCGTTAGTTCCTGCCCGAAACATTTC
TGGGCAGGCTCAGGGCGTGGCTCGACCGGGGTCTTGGATAGTGTTCTGTG
TTGTCCTTCTTATATCATTTATTCGTAGAGTAAAATGCTATACTAAAGTA
GTCATAAAAGGCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

AT27333.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:23:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14651-RB 3410 CG14651-RB 1..3406 11..3416 17030 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:02:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 306531..309934 11..3414 17020 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:00:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:02:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4480812..4484217 11..3416 17030 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 4221643..4225048 11..3416 17030 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:02:47 has no hits.

AT27333.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:03:50 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 306531..309875 11..3355 100 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:25:16 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3240 18..3257 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:40:38 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3240 18..3257 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:56:06 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3240 18..3257 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:16:18 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3240 18..3257 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:19:39 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3240 18..3257 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:13:29 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3404 11..3414 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:40:37 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3404 11..3414 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:56:06 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3404 11..3414 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:18 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3404 11..3414 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:19:39 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
CG14651-RB 1..3404 11..3414 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:03:50 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4480812..4484215 11..3414 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:03:50 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4480812..4484215 11..3414 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:03:50 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4480812..4484215 11..3414 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:56:06 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 306534..309937 11..3414 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:03:03 Download gff for AT27333.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4221643..4225046 11..3414 100   Plus

AT27333.pep Sequence

Translation from 2 to 3256

> AT27333.pep
SCRFHMDPENLEVGQNYEGSQEFDESSTSSISNKGPDDSQFKREAEKAIC
IMPPRPGTTMMNYQELYIPRNQLTDVYYPIQEAQRWLTLMDKMGKAHRFP
LPTILPKVIQTRYVPKRHLPKDVEVDRRRRQYQKINLVNELAKAGLTDDV
LQPTEEQYNVMSEFAFPHKFPLSYFDDSNFDINSPAAWFELGVVGDAHYP
LPAKAYLPYNQSLLNCQWGMAAVTAHHEDSDLWTLLSLEDGCTYTVPKLQ
FMFMAEDPHKYIKRLQAAVHERHKGEQLMLMELIVDCVLHEDIESTVFYS
FKPIESVLQAAKVSEQCKRRLRSEVNLVFERLMALYELEQFILKMPKEFP
QFRNINLKEFLPRSFAVDVSGKERLELQALGITMQEKRYDYLKASLFYCV
GGIEAMAGVAIECQYIETLSIFICSFSKPLALVDFLQAQEAHSDNVATFL
KVYWPQQLTTVITVVLRALGKGWLDISLNTWTVYLMCKISRFILQVKFRM
QESMEVLLETSLMNFSHFVCDPCLQFLELKSNYKWTNNYIDTEFPFQKPV
FAMTLGISEDRKVFYSTDPDEFQPGLVEIFKKCLEKSSGVRCIDGSVMSF
LKFAPNLYILTVELIEDRFLRENELLKNCYAKAVLPLRAYARLYERFIDF
YLLNVNTYMQAYAQAHKPSSEVKRDILENKRLKEELREILPAFITIGPFY
INVDTMKQFMIKKRIEVVRRIFEYYVDRMYETNEVLLDRCLEMFRRIAER
PISIEHLYEIRDFAQTVPDLVDELKADIQVMWLEYDLLDSFFYNLSDHQF
AMKWNVYAWPHQIMVRLSTLKDEQKVDIEDFLRLHASECQAFEERLESLN
DEVQAYSLAFNTNRAQETSVDIKKTWALIKELEKVSQTLQFRQELFELEP
LSVEFLESIIASFTPYKNLWYGCANFLKLEDATLGNPIAQLDLEDVWNNL
MRLRDELNESMKIFHEKVEIMDVAKTFIAKIDDFVPVYNSIKDIRNENWM
YIHWQELSAITGQEIKYSVAMNYQYLIRKGILDVLPEVHIISEKANNEAE
EIRRAIEEEERRKQAELNAMLLRKQLRKCRRDIL*

AT27333.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:29:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13047-PA 1080 GF13047-PA 29..1080 35..1084 4980 87.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12461-PA 1079 GG12461-PA 1..1079 6..1084 5520 95.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:29:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10724-PA 1064 GH10724-PA 5..1064 19..1084 4370 75.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14651-PB 1079 CG14651-PB 1..1079 6..1084 5623 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:29:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11391-PA 1065 GI11391-PA 2..1064 22..1083 4373 75.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19070-PA 1067 GL19070-PA 2..1067 18..1084 4808 81.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:29:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25333-PA 1067 GA25333-PA 2..1067 18..1084 4795 81.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10760-PA 1106 GM10760-PA 31..1106 9..1084 5695 98 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:29:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19736-PA 1079 GD19736-PA 1..1079 6..1084 5705 98 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12635-PA 1063 GJ12635-PA 23..1063 44..1084 4430 77.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19062-PA 1064 GK19062-PA 27..1064 47..1084 4483 79.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25422-PA 1079 GE25422-PA 1..1079 6..1084 5561 96.1 Plus

AT27333.hyp Sequence

Translation from 11 to 3256

> AT27333.hyp
FHMDPENLEVGQNYEGSQEFDESSTSSISNKGPDDSQFKREAEKAICIMP
PRPGTTMMNYQELYIPRNQLTDVYYPIQEAQRWLTLMDKMGKAHRFPLPT
ILPKVIQTRYVPKRHLPKDVEVDRRRRQYQKINLVNELAKAGLTDDVLQP
TEEQYNVMSEFAFPHKFPLSYFDDSNFDINSPAAWFELGVVGDAHYPLPA
KAYLPYNQSLLNCQWGMAAVTAHHEDSDLWTLLSLEDGCTYTVPKLQFMF
MAEDPHKYIKRLQAAVHERHKGEQLMLMELIVDCVLHEDIESTVFYSFKP
IESVLQAAKVSEQCKRRLRSEVNLVFERLMALYELEQFILKMPKEFPQFR
NINLKEFLPRSFAVDVSGKERLELQALGITMQEKRYDYLKASLFYCVGGI
EAMAGVAIECQYIETLSIFICSFSKPLALVDFLQAQEAHSDNVATFLKVY
WPQQLTTVITVVLRALGKGWLDISLNTWTVYLMCKISRFILQVKFRMQES
MEVLLETSLMNFSHFVCDPCLQFLELKSNYKWTNNYIDTEFPFQKPVFAM
TLGISEDRKVFYSTDPDEFQPGLVEIFKKCLEKSSGVRCIDGSVMSFLKF
APNLYILTVELIEDRFLRENELLKNCYAKAVLPLRAYARLYERFIDFYLL
NVNTYMQAYAQAHKPSSEVKRDILENKRLKEELREILPAFITIGPFYINV
DTMKQFMIKKRIEVVRRIFEYYVDRMYETNEVLLDRCLEMFRRIAERPIS
IEHLYEIRDFAQTVPDLVDELKADIQVMWLEYDLLDSFFYNLSDHQFAMK
WNVYAWPHQIMVRLSTLKDEQKVDIEDFLRLHASECQAFEERLESLNDEV
QAYSLAFNTNRAQETSVDIKKTWALIKELEKVSQTLQFRQELFELEPLSV
EFLESIIASFTPYKNLWYGCANFLKLEDATLGNPIAQLDLEDVWNNLMRL
RDELNESMKIFHEKVEIMDVAKTFIAKIDDFVPVYNSIKDIRNENWMYIH
WQELSAITGQEIKYSVAMNYQYLIRKGILDVLPEVHIISEKANNEAEEIR
RAIEEEERRKQAELNAMLLRKQLRKCRRDIL*

AT27333.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14651-PB 1079 CG14651-PB 1..1079 3..1081 5623 100 Plus