Clone AT27792 Report

Search the DGRC for AT27792

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:277
Well:92
Vector:pOTB7
Associated Gene/TranscriptCG33937-RA
Protein status:AT27792.pep: wuzgold
Preliminary Size:1509
Sequenced Size:1492

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16751 2002-01-01 Sim4 clustering to Release 2
CG33187 2002-01-18 Blastp of sequenced clone
CG33187 2003-01-01 Sim4 clustering to Release 3
CG33936 2008-04-29 Release 5.5 accounting
CG33937 2008-08-15 Release 5.9 accounting
CG33936 2008-08-15 Release 5.9 accounting
CG33937 2008-12-18 5.12 accounting
CG33936 2008-12-18 5.12 accounting

Clone Sequence Records

AT27792.complete Sequence

1492 bp (1492 high quality bases) assembled on 2002-01-18

GenBank Submission: AY089466

> AT27792.complete
ATTACTTTTGACTTTCGGACATAAATTCAGTGTAATCTTAAGTGAAATTG
TTGAAACAATTTGTTGTTTGTGCAAATGAACATTAGGGGAAATCAAGAAG
TTGGCTTGCGGTGTCGATTTAGTGATCTCTGTAACTTTTGTGTCCGTGTG
GATGAGTTTACTATCCTGATGATCCTGCCACCAATTACTCCGCCGCATTT
GTAAATAAGCACAAGCGACAGCAACCCGTCCAGCAGCTCCGATCCCGCCG
CCACGCTCATACCTCCGGGCAGGGACATCAGCAGCACCCGCTTCTGCCTC
CGCTCGCCTTGCTGCCAAGGTGCCTGGTGCCCCAGTCGTCGGATTGGTCT
CACACACCGGAAGCAGCAACATAAGCCAACCTCCGTCAGTCACCAAGAAG
AGCTCCCTGTCCAGCCGTAAGCTTGGAGGTGGCAAAACCACAGATTCCAG
CATCAAGCGGCGCGTAAAGTTCTCGGCAAATGTGCACACATTCCCTTCCC
TTACAAACACCAAGAAGTCCACCCGGATTGGCGAGCTACAGCTGAAGAAG
AAGGTAAAGAAGCTGAAGCGGATCCGATCGCGTCGGGAGGGCGGAAGTGG
TGAGACAGCGCGTGATCTCCTTAACTCAAGTGGTATAGCCGCAAGTAATC
TGGACATTTACAAACACGGCGTTATCGTTGATGTGGAACCAGTTAAAACA
CCAGAACCACCACGTGTTCTGCGCCTAAACGTTGTGGGCAAATCATCGCC
GGCGACGGGAAAATCTGCATTAATAACAGCGCTGCGGCGTAAGGCTAAAA
GATCAGCAGAACAGGAAGAAAAGTCCAAAGAATCTATAGCTACTGCTACA
GGTAGTAGGACCGGAAAGCCCAAGACAAAGACGATCAGAAAAAGTGGTGG
TAGCAGCGCGAAGACTCTGCTCGCATCCAGCTCTCATTTGGTGGATAGTA
GGGCTGGCTTAGAGGGGAGGAAGAAATCAGTAGTAACGGCGGCAACTGCC
AGTCAGCGGGTTAGTCATAAACAAAAACAAAATGGGCGGCGAGGCCATGG
AAAAATCTGAAGGCGGCGATCAGCCGGAGAGTGCTGGCGAGAAGGAGCAG
GTGCATCAAGGAGCAGACCAACAGGTTCAACGGGAAAAGCGTCGTCGAAG
TGTGTCTCCTGATGGGGGCGATGTAGGCAGTGTAAAGATGGCTGATGTGG
TTTTAGAAGGCGCATCGGATGTTGCCGTAACTAAGAAGCGGGTAAACATT
AACCACAACACATCATCATCGCATCGCCACTCTTGTTTTCCTCACAAAAT
AGATTCTCACTCGGCCGATTCGATACGTATTCTTGGCAACAGTTGTACAG
TTGACGGTGCTCTGCTAAAGCCGAAAAAACGCCACTCAACGCCACACAGC
GAATGCTAATACATTTTGATGAAACAGTCGAAATTGTTTAGTCTAATAAA
AGAGGAAATAATATACTAAAGCAAAAAAAAAAAAAAAAAAAA

AT27792.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG33937-RA 1478 CG33937-RA 1..1475 1..1475 7375 100 Plus
CG33937-RB 1537 CG33937-RB 267..1534 208..1475 6340 100 Plus
CG33937.a 1417 CG33937.a 1..1241 1..1241 6205 100 Plus
CG33937-RB 1537 CG33937-RB 1..209 1..209 1045 100 Plus
CG33937.a 1417 CG33937.a 1241..1414 1302..1475 870 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5182185..5183449 208..1472 6325 100 Plus
chr3R 27901430 chr3R 5181258..5181466 1..209 1045 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:00:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:17:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9356422..9357689 208..1475 6340 100 Plus
3R 32079331 3R 9355495..9355703 1..209 1045 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:57:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9097253..9098520 208..1475 6340 100 Plus
3R 31820162 3R 9096326..9096534 1..209 1045 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:17:57 has no hits.

AT27792.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:18:45 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5181258..5181466 1..209 100 -> Plus
chr3R 5182187..5183449 210..1472 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:26:02 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG33936-RC 264..1075 204..1017 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:45:19 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG33936-RC 264..1075 204..1017 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:44:13 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG43675-RB 264..1119 204..1060 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:13:46 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG33936-RC 264..1075 204..1017 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:29:36 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG43675-RC 264..1119 204..1060 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:09:46 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG33937-RA 1..1472 1..1472 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:45:19 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG33937-RA 1..1472 1..1472 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:44:13 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG33937-RA 1..1472 1..1472 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:13:47 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG33937-RA 1..1472 1..1472 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:29:36 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
CG43675-RC 1..208 1..208 100 -> Plus
CG43675-RC 562..1820 209..1467 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:45 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9355495..9355703 1..209 100 -> Plus
3R 9356424..9357686 210..1472 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:45 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9355495..9355703 1..209 100 -> Plus
3R 9356424..9357686 210..1472 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:45 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9355495..9355703 1..209 100 -> Plus
3R 9356424..9357686 210..1472 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:44:13 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5181217..5181425 1..209 100 -> Plus
arm_3R 5182146..5183408 210..1472 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:47:40 Download gff for AT27792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9096326..9096534 1..209 100 -> Plus
3R 9097255..9098517 210..1472 100   Plus

AT27792.pep Sequence

Translation from 1031 to 1408

> AT27792.pep
MGGEAMEKSEGGDQPESAGEKEQVHQGADQQVQREKRRRSVSPDGGDVGS
VKMADVVLEGASDVAVTKKRVNINHNTSSSHRHSCFPHKIDSHSADSIRI
LGNSCTVDGALLKPKKRHSTPHSEC*

AT27792.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG45050-PI 183 CG45050-PI 1..70 1..70 351 100 Plus
CG45050-PH 183 CG45050-PH 1..70 1..70 351 100 Plus

AT27792.hyp Sequence

Translation from 1031 to 1408

> AT27792.hyp
MGGEAMEKSEGGDQPESAGEKEQVHQGADQQVQREKRRRSVSPDGGDVGS
VKMADVVLEGASDVAVTKKRVNINHNTSSSHRHSCFPHKIDSHSADSIRI
LGNSCTVDGALLKPKKRHSTPHSEC*

AT27792.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:20:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG45050-PI 183 CG45050-PI 1..70 1..70 351 100 Plus
CG45050-PH 183 CG45050-PH 1..70 1..70 351 100 Plus