BDGP Sequence Production Resources |
Search the DGRC for AT27838
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 278 |
Well: | 38 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG14609-RA |
Protein status: | AT27838.pep: gold |
Preliminary Size: | 1764 |
Sequenced Size: | 2011 |
Gene | Date | Evidence |
---|---|---|
CG14609 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14609 | 2002-01-18 | Blastp of sequenced clone |
CG14609 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14609 | 2008-04-29 | Release 5.5 accounting |
CG14609 | 2008-08-15 | Release 5.9 accounting |
CG14609 | 2008-12-18 | 5.12 accounting |
2011 bp (2011 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089467
> AT27838.complete CTATGATAGTGTCAAACATATATTTTTCTTCTATTGATCACATCCACACG AGAATCGAAGGTGCAATAAGCTCTATTAAATCACAATTTAGCGAAGAGCC CCCAAAGTCACTTAACCATTCAACATGCCGCCGTGTACTTTGCGCCAGAG AGGCATGGCCTATATACCACGTCGGGACAAGAACCGAGAGAAGGATGTTT TGGCCCCCAAGCCTGTGCATCCGCGCTCCTTGAGATTTCATGGATTCTTT GGCATGTCGTACGTGCATCAGCATGTGATGGTTGATGAGCGATGGACCCC CAATTCCCTAACCGAGCAGTTCAAGGGAATGACCGACTTGTTGACGCGTC GTTTGGTGTTCAAGAACCATGAGTCGAAGGCGAATCGCCAGCGGTATTTT CGAGAGAACAAGCGCCTGAAGTTGCAATGCCGCGATGGTCGCGCAAAATT ACAGAATATTCTGATCAATGACAATACCCATAAGATCCGCAACTTTCTCA TCAACCATAAGCCGCTGCAGAGACTGTACCAGAAGATGCCAATTCACTTG GTCGTGGACAACATCAATCAGCGAACTTTTGTGATGAGAAAGGAGCGGGA TCGTTTGGAGTTTCGCTTGGATCAGTTGAAGCAGCATTACAAGGAACAGC TGCTGCGTAGAGCACTTTTGCAGAATCGCATTAAGTACCAGAACGAATTT ATTCTCGACGAGGAGTTGAAGTCACGAGTTTTTCTTAAGAAGATTGAAAA TTCGAATGTGCGCCTAAAGGCGATCAAGACGATCAACAACACCTACAAAA AGATGATACAGGTGCTCGTTCATGACGAGATCTTCTATGAACCCATCTTG CGCTCCCTTAGCAGCGACATGGACGATCAATCAAACTTCATCAAACATAT CCTCTTCCTGGGCATGCCGGCGATTGCGAAGTTCAAGGAGTTGAACGATG AGTTCCGAAACATGGAGGAGAAATCCCGGAAAAACCTGCAGCATAAATTG CAAATGCTGTCCGCTCTAAAGAAACCGGCAGGTACATCGATTGCTAATTT CAATAAGCCCAAGGAGGCGGCTCCAACGACGAATCTGAAGCGATATGTTC GGGAAACTCAGAGCATGATGATTCTAAAACTGGAGCTAAAGGCTGTGGAA AAGACAATCAAGGAGGTTAAGTTTGTGACACTCTGTTCGCAGGCCAAGGA AATTTATCCACGAATGAAGAGCCAGGTGGACAACAATGATAAACTGCATC GTATGATTGTCAATGACATGTTGGCTCATGAAATGCTGGAAACCAAGATG AAGTGCGCCAGTGTCTTGAAAGGGGTGCTGATCAACAATCTGTCAGAGGA AGAGATTAATCGCTTGGAGCGCATTAAGGACCTAAAGAAAACGCTTCAAA ATGACATCCAATTTGAACAAGATACTTTGCAACATCTTAAGAACAGAGCT GATGCATATGTATTGTTGAGAGTTAGCATTTGGAATCTTTTGGAGATCCT TCGTCACATTGATCGCCAGCCCAAATTACTACGTGCGCAGTATCCCAACT CGTACTTGAAGCTCCCGTTGCTAAAATTCGAAATGCTGAACATGAGGGCT GCTGCCCCAGAGATTTTCGAGGAGAATATTGATAACATAATGCATATGGT GAAGCGTAAGATCTACAAGCTGATGAAGGCTTATGCAGTTGAGCTCAAAC CGGCGACCATCAAGCGAAATGTCGAGGAATACCATGCCGACTTCCTGGCC AGCCTAGATATGTACGAGCCAGTGGATAATGAAGAGCAGGCTCCAACAGC TCCCGAGGATGACATCCTGCAGGAGAACAAGACCATGGCCAATGTACCCA ACCGCAAACAAATCAAGGCCCAAAGTGCCAAGCTTGTGGAGGAGCTGGCC AAGCGGGATGAAATGTAAATGTTTTGTTAGGTATTCGATTTGCAGCTGTT GCAGATAAAATTTGAAGTAACTTAAATTTTGCATGCTAAAAACAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14609-RA | 2146 | CG14609-RA | 43..2051 | 1..2009 | 10015 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3027816..3028376 | 652..1212 | 2805 | 100 | Plus |
chr3R | 27901430 | chr3R | 3029056..3029420 | 1629..1993 | 1810 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 3027028..3027371 | 1..344 | 1720 | 100 | Plus |
chr3R | 27901430 | chr3R | 3027433..3027740 | 345..652 | 1540 | 100 | Plus |
chr3R | 27901430 | chr3R | 3028839..3028998 | 1469..1628 | 800 | 100 | Plus |
chr3R | 27901430 | chr3R | 3028438..3028585 | 1212..1359 | 740 | 100 | Plus |
chr3R | 27901430 | chr3R | 3028638..3028752 | 1356..1470 | 560 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 7201758..7202318 | 652..1212 | 2790 | 99.8 | Plus |
3R | 32079331 | 3R | 7202998..7203378 | 1629..2009 | 1890 | 99.7 | Plus |
3R | 32079331 | 3R | 7200970..7201313 | 1..344 | 1720 | 100 | Plus |
3R | 32079331 | 3R | 7201375..7201682 | 345..652 | 1540 | 100 | Plus |
3R | 32079331 | 3R | 7202781..7202940 | 1469..1628 | 800 | 100 | Plus |
3R | 32079331 | 3R | 7202380..7202527 | 1212..1359 | 740 | 100 | Plus |
3R | 32079331 | 3R | 7202580..7202694 | 1356..1470 | 560 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 6942589..6943149 | 652..1212 | 2790 | 99.8 | Plus |
3R | 31820162 | 3R | 6943829..6944209 | 1629..2009 | 1890 | 99.7 | Plus |
3R | 31820162 | 3R | 6941801..6942144 | 1..344 | 1720 | 100 | Plus |
3R | 31820162 | 3R | 6942206..6942513 | 345..652 | 1540 | 100 | Plus |
3R | 31820162 | 3R | 6943612..6943771 | 1469..1628 | 800 | 100 | Plus |
3R | 31820162 | 3R | 6943211..6943358 | 1212..1359 | 740 | 100 | Plus |
3R | 31820162 | 3R | 6943411..6943525 | 1356..1470 | 560 | 99.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3027028..3027371 | 1..344 | 100 | -> | Plus |
chr3R | 3027433..3027740 | 345..652 | 100 | -> | Plus |
chr3R | 3027817..3028376 | 653..1212 | 100 | -> | Plus |
chr3R | 3028439..3028585 | 1213..1359 | 100 | -> | Plus |
chr3R | 3028642..3028752 | 1360..1470 | 100 | -> | Plus |
chr3R | 3028841..3028998 | 1471..1628 | 100 | -> | Plus |
chr3R | 3029056..3029420 | 1629..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1794 | 125..1918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1794 | 125..1918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1794 | 125..1918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1794 | 125..1918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1794 | 125..1918 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1993 | 1..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1993 | 1..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1993 | 1..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1993 | 1..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14609-RA | 1..1993 | 1..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7200970..7201313 | 1..344 | 100 | -> | Plus |
3R | 7201375..7201682 | 345..652 | 100 | -> | Plus |
3R | 7201759..7202318 | 653..1212 | 99 | -> | Plus |
3R | 7202381..7202527 | 1213..1359 | 100 | -> | Plus |
3R | 7202584..7202694 | 1360..1470 | 100 | -> | Plus |
3R | 7202783..7202940 | 1471..1628 | 100 | -> | Plus |
3R | 7202998..7203362 | 1629..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7200970..7201313 | 1..344 | 100 | -> | Plus |
3R | 7201375..7201682 | 345..652 | 100 | -> | Plus |
3R | 7201759..7202318 | 653..1212 | 99 | -> | Plus |
3R | 7202381..7202527 | 1213..1359 | 100 | -> | Plus |
3R | 7202584..7202694 | 1360..1470 | 100 | -> | Plus |
3R | 7202783..7202940 | 1471..1628 | 100 | -> | Plus |
3R | 7202998..7203362 | 1629..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7200970..7201313 | 1..344 | 100 | -> | Plus |
3R | 7201375..7201682 | 345..652 | 100 | -> | Plus |
3R | 7201759..7202318 | 653..1212 | 99 | -> | Plus |
3R | 7202381..7202527 | 1213..1359 | 100 | -> | Plus |
3R | 7202584..7202694 | 1360..1470 | 100 | -> | Plus |
3R | 7202783..7202940 | 1471..1628 | 100 | -> | Plus |
3R | 7202998..7203362 | 1629..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3028505..3028662 | 1471..1628 | 100 | -> | Plus |
arm_3R | 3028103..3028249 | 1213..1359 | 100 | -> | Plus |
arm_3R | 3028306..3028416 | 1360..1470 | 100 | -> | Plus |
arm_3R | 3026692..3027035 | 1..344 | 100 | -> | Plus |
arm_3R | 3027097..3027404 | 345..652 | 100 | -> | Plus |
arm_3R | 3027481..3028040 | 653..1212 | 99 | -> | Plus |
arm_3R | 3028720..3029084 | 1629..1993 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6943829..6944193 | 1629..1993 | 99 | Plus | |
3R | 6941801..6942144 | 1..344 | 100 | -> | Plus |
3R | 6942206..6942513 | 345..652 | 100 | -> | Plus |
3R | 6942590..6943149 | 653..1212 | 99 | -> | Plus |
3R | 6943212..6943358 | 1213..1359 | 100 | -> | Plus |
3R | 6943415..6943525 | 1360..1470 | 100 | -> | Plus |
3R | 6943614..6943771 | 1471..1628 | 100 | -> | Plus |
Translation from 124 to 1917
> AT27838.pep MPPCTLRQRGMAYIPRRDKNREKDVLAPKPVHPRSLRFHGFFGMSYVHQH VMVDERWTPNSLTEQFKGMTDLLTRRLVFKNHESKANRQRYFRENKRLKL QCRDGRAKLQNILINDNTHKIRNFLINHKPLQRLYQKMPIHLVVDNINQR TFVMRKERDRLEFRLDQLKQHYKEQLLRRALLQNRIKYQNEFILDEELKS RVFLKKIENSNVRLKAIKTINNTYKKMIQVLVHDEIFYEPILRSLSSDMD DQSNFIKHILFLGMPAIAKFKELNDEFRNMEEKSRKNLQHKLQMLSALKK PAGTSIANFNKPKEAAPTTNLKRYVRETQSMMILKLELKAVEKTIKEVKF VTLCSQAKEIYPRMKSQVDNNDKLHRMIVNDMLAHEMLETKMKCASVLKG VLINNLSEEEINRLERIKDLKKTLQNDIQFEQDTLQHLKNRADAYVLLRV SIWNLLEILRHIDRQPKLLRAQYPNSYLKLPLLKFEMLNMRAAAPEIFEE NIDNIMHMVKRKIYKLMKAYAVELKPATIKRNVEEYHADFLASLDMYEPV DNEEQAPTAPEDDILQENKTMANVPNRKQIKAQSAKLVEELAKRDEM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17662-PA | 596 | GF17662-PA | 1..596 | 1..596 | 2961 | 93.1 | Plus |
Dana\GF17661-PA | 479 | GF17661-PA | 178..479 | 295..596 | 1078 | 67.9 | Plus |
Dana\GF17661-PA | 479 | GF17661-PA | 1..175 | 1..177 | 736 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13919-PA | 597 | GG13919-PA | 1..597 | 1..597 | 3112 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18293-PA | 594 | GH18293-PA | 2..594 | 3..596 | 2277 | 71.5 | Plus |
Dgri\GH18292-PA | 594 | GH18292-PA | 2..593 | 3..596 | 1879 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14609-PB | 597 | CG14609-PB | 1..597 | 1..597 | 3059 | 100 | Plus |
CG14609-PA | 597 | CG14609-PA | 1..597 | 1..597 | 3059 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24103-PA | 600 | GI24103-PA | 2..600 | 3..596 | 2265 | 71.3 | Plus |
Dmoj\GI24101-PA | 592 | GI24101-PA | 2..591 | 3..596 | 1734 | 55.9 | Plus |
Dmoj\GI24102-PA | 453 | GI24102-PA | 15..361 | 16..359 | 1046 | 57.6 | Plus |
Dmoj\GI24102-PA | 453 | GI24102-PA | 350..449 | 483..593 | 165 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12428-PA | 594 | GL12428-PA | 2..594 | 3..596 | 2760 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13108-PA | 594 | GA13108-PA | 2..594 | 3..596 | 2755 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10941-PA | 597 | GM10941-PA | 1..597 | 1..597 | 3141 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19920-PA | 597 | GD19920-PA | 1..597 | 1..597 | 3147 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10251-PA | 598 | GJ10251-PA | 2..598 | 3..596 | 2409 | 74.5 | Plus |
Dvir\GJ10926-PA | 598 | GJ10926-PA | 2..598 | 3..596 | 2406 | 74.5 | Plus |
Dvir\GJ10925-PA | 598 | GJ10925-PA | 2..597 | 3..596 | 1890 | 58 | Plus |
Dvir\GJ10250-PA | 598 | GJ10250-PA | 2..597 | 3..596 | 1878 | 57.9 | Plus |
Dvir\GJ10922-PA | 574 | GJ10922-PA | 1..573 | 26..596 | 1838 | 59.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14527-PA | 594 | GK14527-PA | 2..594 | 3..596 | 2708 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24912-PA | 597 | GE24912-PA | 1..597 | 1..597 | 3134 | 99 | Plus |
Translation from 124 to 1917
> AT27838.hyp MPPCTLRQRGMAYIPRRDKNREKDVLAPKPVHPRSLRFHGFFGMSYVHQH VMVDERWTPNSLTEQFKGMTDLLTRRLVFKNHESKANRQRYFRENKRLKL QCRDGRAKLQNILINDNTHKIRNFLINHKPLQRLYQKMPIHLVVDNINQR TFVMRKERDRLEFRLDQLKQHYKEQLLRRALLQNRIKYQNEFILDEELKS RVFLKKIENSNVRLKAIKTINNTYKKMIQVLVHDEIFYEPILRSLSSDMD DQSNFIKHILFLGMPAIAKFKELNDEFRNMEEKSRKNLQHKLQMLSALKK PAGTSIANFNKPKEAAPTTNLKRYVRETQSMMILKLELKAVEKTIKEVKF VTLCSQAKEIYPRMKSQVDNNDKLHRMIVNDMLAHEMLETKMKCASVLKG VLINNLSEEEINRLERIKDLKKTLQNDIQFEQDTLQHLKNRADAYVLLRV SIWNLLEILRHIDRQPKLLRAQYPNSYLKLPLLKFEMLNMRAAAPEIFEE NIDNIMHMVKRKIYKLMKAYAVELKPATIKRNVEEYHADFLASLDMYEPV DNEEQAPTAPEDDILQENKTMANVPNRKQIKAQSAKLVEELAKRDEM*