BDGP Sequence Production Resources |
Search the DGRC for AT27896
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 278 |
Well: | 96 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG32396-RA |
Protein status: | AT27896.pep: gold |
Preliminary Size: | 5467 |
Sequenced Size: | 1627 |
Gene | Date | Evidence |
---|---|---|
CG8339 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32396 | 2002-01-18 | Blastp of sequenced clone |
CG32396 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32396 | 2008-04-29 | Release 5.5 accounting |
CG32396 | 2008-08-15 | Release 5.9 accounting |
CG32396 | 2008-12-18 | 5.12 accounting |
1627 bp (1627 high quality bases) assembled on 2002-01-18
GenBank Submission: AY089468
> AT27896.complete CTTTGATCAAAGCGCATGAGCGAGAAAAGTGGAGGACAGGATGAGGAGGC AGCCCCTAGATTAGTGGTTTTTAAGGAGCGGAGATTGGGTCGAAATGAGG GAGATTGTCACACTGCAGATCGGCGGAGCCGGAAATGCCATCGGAGATTC TTTCTGGCACGTGATTTCACATGAACACGGTGTGGATTATGCTTCTGGTC GATTTGGCGGCACCAGTCCACTTCAGCTGGAGCGGATCAATGTGTTCTTT AACGCAACGGCCAGCAAACGGTTCTATGCCCGCACCATACTGATAGACAC GGAAGCCAGCACCATTCAGCGTCTCAACGCCAGCAGTCAGCTGTATAGGC CGGAGAACTTTGTGGCTGGATCGGAGAGTGCTGGGAACAACTTTGCACGT GGCTATCATACGGATGGTGCCGCCATTCTAGATCAGGTGCTAGAAAATAC GCGCCGGGAGGTCGAATCGGTGGATTCGTTGCAGGGCTTTCAGTTGCTCC ACTCTATCGGAGGCGGAACTGGCTCCGGCTTGACCTCTCTAATAATGGAG GCCCTGGTGGAGCAGTATCCGGATAATTTACTCTGCAACTATGTGACCAT TCCGTCGCCGAATATGTCGCAGGTGGTTGTGGAACCCTATAATGCCCTAC TTAGTACTCCCGCCTTGGTTAACAATTCGCATTTAACCTTCTGCCTTGAT AACGAGGCACTGTTCCAAATCTGCAATAGAAACCTGAAGCTCAAGATGTC CGGCTACGAGCACATTAACCACATAGTAGCCCTGACCATGTCGGGTATAA CCACTTGCCTGCGGTTTCCTGGCCAACTGAATGCTGGATTGCGCAAGATC TATGTAAATATGGTGCCATTCCCGCGGCTGCACTTCCTCATACCGGGATT CGCACCATTGGTCACTTGCAAGCAGCAGCAGTTCAGCAAGGGTACCGTTT CGGAGCTGGTGCAGCAGATCTTCTACAGTAATAATCTGCTCTGTGCCATC GATCTTCGAAAGGGCAAACTGCTGACCGCTGCTGGAATTTTCCGAGGAAG AATGTCACCGCGTGAGGTGGATCAACTGATGACTGGGGTGAGAAATAAGA ATATCAACAATTTCGTGGACTGGATACCCAACAATATCAAGACGGCTATT TGCGATATACCGCCGAGGGGCCTCAAGATGTCAGCTACATTCATTGGCAA CACAACGGCGATTCAGACGCTGTTCCAGCGATTACTGGACGCTTCCATGT CCATGTTGCGGCGCAAGGCCCATCTTCACTGGTACACGGGAGAGGGAATG GAGGAACAGGAGTTCCAGGATGCGCAGCAGGAGTTACAAGCCATCATCGA TGATTACCGCAGTAGTGCTGAGGGCGAGGATTCCGGTGGTGGCGGTGGAG GAGGCGGTGGCCGAAGTGGAAGCGCCGAAAGCGGTGAAGAGGAGGCCACG CCCGAAGCCCATTGTCAATATTGCACCGAATAATATTCCTTCCACATTTA ATTCAGAGAGATAGTTATCAGGGTTCACCAAATTCAAAAGTGTTCATTTG TAATTACGCGTCTTGGAATCAGGACATATTTCGAGTAGAAAAATATATAT TTTAGGTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32396-RA | 1649 | CG32396-RA | 41..1649 | 1..1609 | 8045 | 100 | Plus |
betaTub85D.a | 1862 | betaTub85D.a | 915..1036 | 785..906 | 220 | 78.6 | Plus |
betaTub85D-RA | 2001 | betaTub85D-RA | 1053..1174 | 785..906 | 220 | 78.6 | Plus |
betaTub85D.a | 1862 | betaTub85D.a | 1242..1346 | 1112..1216 | 195 | 79 | Plus |
betaTub85D-RA | 2001 | betaTub85D-RA | 1380..1484 | 1112..1216 | 195 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 6523458..6524915 | 152..1609 | 7110 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 6523255..6523405 | 1..151 | 725 | 98.7 | Plus |
chr3R | 27901430 | chr3R | 5235012..5235133 | 906..785 | 220 | 78.7 | Minus |
chr2R | 21145070 | chr2R | 15335157..15335280 | 903..780 | 200 | 77.4 | Minus |
chr3R | 27901430 | chr3R | 5234702..5234806 | 1216..1112 | 195 | 79 | Minus |
chr2R | 21145070 | chr2R | 20197476..20197597 | 782..903 | 190 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 6530972..6532430 | 152..1610 | 7295 | 100 | Plus |
3L | 28110227 | 3L | 6530769..6530919 | 1..151 | 755 | 100 | Plus |
3R | 32079331 | 3R | 9409179..9409300 | 906..785 | 220 | 78.7 | Minus |
2R | 25286936 | 2R | 24311491..24311612 | 782..903 | 205 | 77.9 | Plus |
2R | 25286936 | 2R | 19447992..19448115 | 903..780 | 200 | 77.4 | Minus |
3R | 32079331 | 3R | 9408869..9408973 | 1216..1112 | 195 | 79 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 6524072..6525530 | 152..1610 | 7295 | 100 | Plus |
3L | 28103327 | 3L | 6523869..6524019 | 1..151 | 755 | 100 | Plus |
3R | 31820162 | 3R | 9150010..9150131 | 906..785 | 220 | 78.6 | Minus |
2R | 25260384 | 2R | 24312690..24312811 | 782..903 | 205 | 77.8 | Plus |
2R | 25260384 | 2R | 19449191..19449314 | 903..780 | 200 | 77.4 | Minus |
3R | 31820162 | 3R | 9149700..9149804 | 1216..1112 | 195 | 79 | Minus |
2R | 25260384 | 2R | 24313159..24313223 | 1251..1315 | 145 | 81.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 6523255..6523405 | 1..151 | 98 | -> | Plus |
chr3L | 6523458..6524915 | 152..1609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 1..1389 | 95..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 1..1389 | 95..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 1..1389 | 95..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 1..1389 | 95..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 1..1389 | 95..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 41..1649 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 41..1649 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 41..1649 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 41..1649 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32396-RA | 41..1649 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6530769..6530919 | 1..151 | 100 | -> | Plus |
3L | 6530972..6532429 | 152..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6530769..6530919 | 1..151 | 100 | -> | Plus |
3L | 6530972..6532429 | 152..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6530769..6530919 | 1..151 | 100 | -> | Plus |
3L | 6530972..6532429 | 152..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 6523869..6524019 | 1..151 | 100 | -> | Plus |
arm_3L | 6524072..6525529 | 152..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6524072..6525529 | 152..1609 | 100 | Plus | |
3L | 6523869..6524019 | 1..151 | 100 | -> | Plus |
Translation from 94 to 1482
> AT27896.pep MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINV FFNATASKRFYARTILIDTEASTIQRLNASSQLYRPENFVAGSESAGNNF ARGYHTDGAAILDQVLENTRREVESVDSLQGFQLLHSIGGGTGSGLTSLI MEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVNNSHLTFC LDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLR KIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLC AIDLRKGKLLTAAGIFRGRMSPREVDQLMTGVRNKNINNFVDWIPNNIKT AICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGE GMEEQEFQDAQQELQAIIDDYRSSAEGEDSGGGGGGGGGRSGSAESGEEE ATPEAHCQYCTE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10957-PA | 457 | GF10957-PA | 1..425 | 1..425 | 2146 | 96.2 | Plus |
Dana\GF12605-PA | 447 | GF12605-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dana\GF17765-PA | 446 | GF17765-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dana\GF11391-PA | 474 | GF11391-PA | 1..454 | 1..427 | 1204 | 52.1 | Plus |
Dana\GF16133-PA | 513 | GF16133-PA | 1..484 | 1..427 | 1110 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15348-PA | 462 | GG15348-PA | 1..462 | 1..462 | 2194 | 95 | Plus |
Dere\betaTub85D-PA | 446 | GG17374-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dere\GG22960-PA | 454 | GG22960-PA | 1..434 | 1..427 | 1235 | 54.5 | Plus |
Dere\GG20906-PA | 475 | GG20906-PA | 1..456 | 1..427 | 1223 | 51.9 | Plus |
Dere\GG12076-PA | 513 | GG12076-PA | 1..484 | 1..427 | 1154 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12373-PA | 456 | GH12373-PA | 1..455 | 1..461 | 2045 | 85.3 | Plus |
Dgri\GH20203-PA | 447 | GH20203-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dgri\GH19142-PA | 446 | GH19142-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dgri\GH20987-PA | 454 | GH20987-PA | 1..434 | 1..427 | 1236 | 54 | Plus |
Dgri\GH14021-PA | 512 | GH14021-PA | 1..484 | 1..427 | 986 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32396-PA | 462 | CG32396-PA | 1..462 | 1..462 | 2405 | 100 | Plus |
betaTub56D-PB | 447 | CG9277-PB | 1..427 | 1..426 | 1280 | 55.4 | Plus |
betaTub85D-PA | 446 | CG9359-PA | 1..444 | 1..434 | 1263 | 54.4 | Plus |
betaTub60D-PB | 453 | CG3401-PB | 1..432 | 1..426 | 1255 | 54.3 | Plus |
betaTub60D-PA | 454 | CG3401-PA | 1..433 | 1..426 | 1253 | 53.9 | Plus |
betaTub97EF-PB | 457 | CG4869-PB | 1..427 | 1..426 | 1247 | 55.4 | Plus |
betaTub97EF-PC | 457 | CG4869-PC | 1..427 | 1..426 | 1238 | 54.4 | Plus |
betaTub56D-PA | 456 | CG9277-PA | 29..436 | 20..426 | 1230 | 55.3 | Plus |
alphaTub84D-PA | 450 | CG2512-PA | 1..446 | 1..437 | 763 | 34.7 | Plus |
alphaTub84B-PA | 450 | CG1913-PA | 1..446 | 1..437 | 758 | 34.7 | Plus |
alphaTub67C-PA | 462 | CG8308-PA | 1..455 | 1..435 | 747 | 34.4 | Plus |
alphaTub85E-PA | 449 | CG9476-PA | 1..432 | 1..421 | 736 | 34.6 | Plus |
CG7794-PA | 455 | CG7794-PA | 6..433 | 3..421 | 635 | 31.2 | Plus |
gammaTub23C-PA | 475 | CG3157-PA | 4..443 | 3..424 | 556 | 31 | Plus |
gammaTub37C-PB | 457 | CG17566-PB | 4..441 | 3..426 | 551 | 30.9 | Plus |
gammaTub37C-PA | 457 | CG17566-PA | 4..441 | 3..426 | 551 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14752-PA | 460 | GI14752-PA | 1..422 | 1..422 | 2109 | 94.8 | Plus |
Dmoj\GI20729-PA | 447 | GI20729-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dmoj\GI23599-PA | 446 | GI23599-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dmoj\GI21321-PA | 454 | GI21321-PA | 1..434 | 1..427 | 1234 | 54.5 | Plus |
Dmoj\GI24852-PA | 512 | GI24852-PA | 238..484 | 181..427 | 804 | 58.3 | Plus |
Dmoj\GI24852-PA | 512 | GI24852-PA | 1..228 | 1..227 | 557 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19895-PA | 469 | GL19895-PA | 1..426 | 1..426 | 2118 | 94.4 | Plus |
Dper\GL16725-PA | 447 | GL16725-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dper\GL13671-PA | 445 | GL13671-PA | 1..427 | 1..427 | 1173 | 53.6 | Plus |
Dper\GL23875-PA | 511 | GL23875-PA | 1..499 | 1..433 | 1149 | 47 | Plus |
Dper\GL12714-PA | 464 | GL12714-PA | 1..456 | 1..433 | 695 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28334-PA | 464 | GA28334-PA | 1..425 | 1..425 | 2111 | 94.4 | Plus |
Dpse\GA27686-PA | 447 | GA27686-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dpse\GA21728-PA | 446 | GA21728-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dpse\GA17427-PA | 454 | GA17427-PA | 1..434 | 1..427 | 1236 | 54.9 | Plus |
Dpse\GA27086-PB | 455 | GA27086-PB | 1..443 | 1..433 | 1225 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14788-PA | 462 | GM14788-PA | 1..462 | 1..462 | 2461 | 98.9 | Plus |
Dsec\GM19828-PA | 447 | GM19828-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dsec\GM26260-PA | 446 | GM26260-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dsec\GM11852-PA | 454 | GM11852-PA | 1..434 | 1..427 | 1240 | 54.7 | Plus |
Dsec\GM16302-PA | 513 | GM16302-PA | 1..484 | 1..427 | 1153 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13960-PA | 462 | GD13960-PA | 1..462 | 1..462 | 2438 | 98.3 | Plus |
Dsim\GD25319-PA | 447 | GD25319-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dsim\GD20798-PA | 446 | GD20798-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dsim\GD14204-PA | 462 | GD14204-PA | 1..455 | 1..435 | 709 | 34.2 | Plus |
Dsim\GD19940-PA | 450 | GD19940-PA | 1..432 | 1..421 | 708 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19155-PA | 461 | GJ19155-PA | 1..461 | 1..462 | 2123 | 90 | Plus |
Dvir\GJ20466-PA | 447 | GJ20466-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dvir\GJ23573-PA | 446 | GJ23573-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dvir\GJ21592-PA | 454 | GJ21592-PA | 1..434 | 1..427 | 1237 | 54 | Plus |
Dvir\GJ24495-PA | 523 | GJ24495-PA | 238..495 | 181..427 | 781 | 55.4 | Plus |
Dvir\GJ24495-PA | 523 | GJ24495-PA | 1..228 | 1..227 | 556 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10221-PA | 456 | GK10221-PA | 1..456 | 1..462 | 2157 | 90.5 | Plus |
Dwil\GK15706-PA | 447 | GK15706-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dwil\GK12133-PA | 446 | GK12133-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dwil\GK22203-PA | 454 | GK22203-PA | 1..434 | 1..427 | 1235 | 54.5 | Plus |
Dwil\GK22527-PA | 513 | GK22527-PA | 1..484 | 1..427 | 1116 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21566-PA | 462 | GE21566-PA | 1..462 | 1..462 | 2205 | 96.3 | Plus |
Dyak\betaTub56D-PA | 447 | GE13844-PA | 1..428 | 1..427 | 1263 | 55.2 | Plus |
Dyak\GE24779-PA | 446 | GE24779-PA | 1..428 | 1..427 | 1240 | 55.2 | Plus |
Dyak\GE14397-PA | 454 | GE14397-PA | 1..434 | 1..427 | 1235 | 54.5 | Plus |
Dyak\GE10520-PA | 513 | GE10520-PA | 1..484 | 1..427 | 1153 | 48.5 | Plus |
Translation from 94 to 1482
> AT27896.hyp MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRFGGTSPLQLERINV FFNATASKRFYARTILIDTEASTIQRLNASSQLYRPENFVAGSESAGNNF ARGYHTDGAAILDQVLENTRREVESVDSLQGFQLLHSIGGGTGSGLTSLI MEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVNNSHLTFC LDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLR KIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLC AIDLRKGKLLTAAGIFRGRMSPREVDQLMTGVRNKNINNFVDWIPNNIKT AICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGE GMEEQEFQDAQQELQAIIDDYRSSAEGEDSGGGGGGGGGRSGSAESGEEE ATPEAHCQYCTE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32396-PA | 462 | CG32396-PA | 1..462 | 1..462 | 2405 | 100 | Plus |
betaTub56D-PB | 447 | CG9277-PB | 1..427 | 1..426 | 1280 | 55.4 | Plus |
betaTub85D-PA | 446 | CG9359-PA | 1..444 | 1..434 | 1263 | 54.4 | Plus |
betaTub60D-PB | 453 | CG3401-PB | 1..432 | 1..426 | 1255 | 54.3 | Plus |
betaTub60D-PA | 454 | CG3401-PA | 1..433 | 1..426 | 1253 | 53.9 | Plus |