BDGP Sequence Production Resources |
Search the DGRC for AT27928
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 279 |
Well: | 28 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG31391-RA |
Protein status: | AT27928.pep: gold |
Preliminary Size: | 2874 |
Sequenced Size: | 1723 |
Gene | Date | Evidence |
---|---|---|
CG6471 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31391 | 2002-05-18 | Blastp of sequenced clone |
CG31391 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31391 | 2008-04-29 | Release 5.5 accounting |
CG31391 | 2008-08-15 | Release 5.9 accounting |
CG31391 | 2008-12-18 | 5.12 accounting |
1723 bp (1723 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118718
> AT27928.complete ACTAAACTTCGTCACGTACACATCAATTTAAATACACTTTAAAAACACTA AACACAACCCGATCTTGGTTTATCTGCGCGACTACGATGAAAAGAGTCCA TGTCGATAACTACGCTCCAAAGTACTACAGCGGCAAGTGGTCATGGGACT CGGAGAAGGACTGCCTCAACTTTCAGGCGCACAACGATCTGGAAAACGCA AGAGAGCGCTATATAATCACCAATGGGTACAAGTTCCTGCGTACCATCGA CCAAGAGGAGGAGCTTATCTTCCGGCAGGAGTATGTACGCGCCAAGTCCA ACACCAGTGACACAGTGGTGCTAAGAGATATTCGAGATCTGGTGCTCTAC TTGATGCCTAAAGACTTTCTAACCTACAAGTTCATTGAATTCATGCATGA GCCACAGGTGCAGTCCGTGCTCCACGCCTTAACATTGTACTTTGAGTACT ACCTACGCCTGGTGGAGTTCGTCCTGATTCGCAGAGATGAACTCTCTGGC CAGATGGCCCAAATTCAGAGCGAGCAGACCACTGAGATGAAGAAAACCTA TTCCGTTTACCTGAGCCACTTCCGCATGCTATTAGCCCGAAACTACTGTG AGATTATCAAGGGCGAGGGATCTATGGCCAAGTACTACCACATGAAGCCG ATTTCCAACATTTCAGCAACTATCCACGATAAGTACTTCCATGAGCATTT TCTGGCAGTATCCATCCAAATAGTCTGGATATGCATGCATCGCCGAGCGT ATTTCGTCATCGAAATGGAGATGAATCGGCTTTTCCGGTCGGAGCACTTT GTTTCCGTCCGCCCTGAGTACCTTGAGTTCACGGAGGCGGAGCGAAGTCT TCTTTACGGCCGAAACAACAAGAACCTCAATTATCGCGTCCAGATCTCTC CGCTGGTCCAAGAGTTGGAGCATGTTGTGACGGAGGATTTGCCCATTCTG TGGATAGGAAAGCGTAAGTATAGGGGCACTGATCCTCACATCGCTCAGAT CGAGTTGGAGTACGTTGTGCCCGGATCGCAGCTCCGCTTGATTGATCTGT CCCATGGAATCCTTGGCCACCCGAAGAATCTCTACAACACCCTTCTGAAC CTCGACTGGCCAGCAGTTCGGTTCTCAAACTTTTCGGAGCAATACGACCC ATATCATATCATCAGACGAAACCACCTGGACATTCCCAAGTTGGGTGAAC TTGAAATGCGAAAATTTGGGGAGAGTTACGAGCACTTTTACGAGATCTTT CACTTTTTCGAGCCAGTCACCCATTCACATATCTGCAAGTGGGTCAAACG GGAGATCAACATAGCGTTCTTTCGGTCCGGAGGTCTGCTCACGAACGTAG TCTCACGATGTGAAAAGGAATTGGCCACCGCATATGAGGGACAAGAAGTG GACAAGATCATTGCCAATTACTTCAAGATAGTGTCTAACATACGAAAGGT GGACTACTTTGAGTCGCCTCGTGTGAGTGACGTTAGCACAGTGAAGAAGG GGAACTTTGGAAAAAGACAAAGTACCTAAAAAGTCGGCTTGAAAGTAGTC AGCAAAAATCATGCATTGTTGGTTGCGATTTTGTGCAAGAATACTACCTT ACTTTTGAGGGCCAAAAATAGGTATTCGTGTAATTTATATATTTCCAACC TGTCTACATATAAAAAAAAAATACATTTATAGTATCATGAAAATATTGAA AAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31391-RA | 1708 | CG31391-RA | 1..1708 | 1..1709 | 8430 | 99.6 | Plus |
CG31467-RA | 1697 | CG31467-RA | 559..929 | 516..886 | 1015 | 84.9 | Plus |
CG31467.a | 1647 | CG31467.a | 559..929 | 516..886 | 1015 | 84.9 | Plus |
CG31467-RA | 1697 | CG31467-RA | 142..329 | 99..286 | 715 | 92 | Plus |
CG31467.a | 1647 | CG31467.a | 142..329 | 99..286 | 715 | 92 | Plus |
CG31467-RA | 1697 | CG31467-RA | 976..1253 | 933..1210 | 415 | 76.6 | Plus |
CG31467-RA | 1697 | CG31467-RA | 1324..1496 | 1281..1453 | 400 | 82 | Plus |
CG31467.a | 1647 | CG31467.a | 1274..1446 | 1281..1453 | 400 | 82 | Plus |
CG31467.a | 1647 | CG31467.a | 976..1233 | 933..1190 | 390 | 76.7 | Plus |
CG31467-RA | 1697 | CG31467-RA | 358..445 | 315..402 | 185 | 80.6 | Plus |
CG31467.a | 1647 | CG31467.a | 358..445 | 315..402 | 185 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 6528916..6530620 | 1705..1 | 8420 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 6530912..6532266 | 1453..99 | 2365 | 78.3 | Minus |
chr3R | 27901430 | chr3R | 6535640..6536260 | 1136..516 | 600 | 73.1 | Minus |
chr3R | 27901430 | chr3R | 6536491..6536683 | 279..87 | 470 | 82.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10703367..10705075 | 1710..1 | 8425 | 99.6 | Minus |
3R | 32079331 | 3R | 10705368..10706722 | 1453..99 | 2380 | 78.4 | Minus |
3R | 32079331 | 3R | 10710096..10710716 | 1136..516 | 600 | 73.1 | Minus |
3R | 32079331 | 3R | 10710947..10711139 | 279..87 | 470 | 82.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10444198..10445906 | 1710..1 | 8435 | 99.6 | Minus |
3R | 31820162 | 3R | 10446766..10447136 | 886..516 | 1015 | 84.9 | Minus |
3R | 31820162 | 3R | 10447366..10447553 | 286..99 | 715 | 92 | Minus |
3R | 31820162 | 3R | 10451778..10451970 | 279..87 | 470 | 82.9 | Minus |
3R | 31820162 | 3R | 10446442..10446719 | 1210..933 | 415 | 76.6 | Minus |
3R | 31820162 | 3R | 10446199..10446371 | 1453..1281 | 400 | 82 | Minus |
3R | 31820162 | 3R | 10450927..10451066 | 1136..997 | 250 | 78.5 | Minus |
3R | 31820162 | 3R | 10451093..10451227 | 970..836 | 210 | 77 | Minus |
3R | 31820162 | 3R | 10451260..10451377 | 803..686 | 185 | 77.1 | Minus |
3R | 31820162 | 3R | 10447250..10447337 | 402..315 | 185 | 80.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6528970..6530620 | 1..1651 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1443 | 87..1529 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1443 | 87..1529 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1443 | 87..1529 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1443 | 87..1529 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1443 | 87..1529 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1704 | 1..1705 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1704 | 1..1705 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1704 | 1..1705 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1704 | 1..1705 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31391-RA | 1..1704 | 1..1705 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10703372..10705075 | 1..1705 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10703372..10705075 | 1..1705 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10703372..10705075 | 1..1705 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6529094..6530797 | 1..1705 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10444203..10445906 | 1..1705 | 99 | Minus |
Translation from 86 to 1528
> AT27928.pep MKRVHVDNYAPKYYSGKWSWDSEKDCLNFQAHNDLENARERYIITNGYKF LRTIDQEEELIFRQEYVRAKSNTSDTVVLRDIRDLVLYLMPKDFLTYKFI EFMHEPQVQSVLHALTLYFEYYLRLVEFVLIRRDELSGQMAQIQSEQTTE MKKTYSVYLSHFRMLLARNYCEIIKGEGSMAKYYHMKPISNISATIHDKY FHEHFLAVSIQIVWICMHRRAYFVIEMEMNRLFRSEHFVSVRPEYLEFTE AERSLLYGRNNKNLNYRVQISPLVQELEHVVTEDLPILWIGKRKYRGTDP HIAQIELEYVVPGSQLRLIDLSHGILGHPKNLYNTLLNLDWPAVRFSNFS EQYDPYHIIRRNHLDIPKLGELEMRKFGESYEHFYEIFHFFEPVTHSHIC KWVKREINIAFFRSGGLLTNVVSRCEKELATAYEGQEVDKIIANYFKIVS NIRKVDYFESPRVSDVSTVKKGNFGKRQST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17445-PA | 465 | GF17445-PA | 1..457 | 1..456 | 1813 | 71.3 | Plus |
Dana\GF20669-PA | 487 | GF20669-PA | 1..473 | 1..475 | 1729 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17278-PA | 477 | GG17278-PA | 1..476 | 1..476 | 2391 | 92.4 | Plus |
Dere\GG17277-PA | 483 | GG17277-PA | 1..456 | 1..456 | 1970 | 78.3 | Plus |
Dere\GG17274-PA | 487 | GG17274-PA | 1..477 | 1..478 | 1716 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17359-PA | 490 | GH17359-PA | 1..455 | 1..454 | 1646 | 64.2 | Plus |
Dgri\GH17029-PA | 487 | GH17029-PA | 1..466 | 1..465 | 1427 | 55.6 | Plus |
Dgri\GH13925-PA | 208 | GH13925-PA | 1..187 | 279..465 | 481 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31391-PA | 480 | CG31391-PA | 1..480 | 1..480 | 2538 | 100 | Plus |
CG31467-PA | 480 | CG31467-PA | 1..456 | 1..456 | 1944 | 78.5 | Plus |
CG14689-PA | 487 | CG14689-PA | 1..477 | 1..478 | 1723 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23898-PA | 491 | GI23898-PA | 1..470 | 1..469 | 1607 | 61.3 | Plus |
Dmoj\GI11569-PA | 480 | GI11569-PA | 1..455 | 1..454 | 1523 | 60 | Plus |
Dmoj\GI12233-PA | 477 | GI12233-PA | 1..455 | 1..454 | 1489 | 59.6 | Plus |
Dmoj\GI21012-PA | 486 | GI21012-PA | 1..453 | 1..454 | 1391 | 55.4 | Plus |
Dmoj\GI21013-PA | 453 | GI21013-PA | 1..449 | 1..453 | 1197 | 49.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12631-PA | 489 | GL12631-PA | 1..473 | 1..475 | 1817 | 71 | Plus |
Dper\GL12630-PA | 455 | GL12630-PA | 1..454 | 1..454 | 1489 | 60.7 | Plus |
Dper\GL12629-PA | 456 | GL12629-PA | 1..455 | 1..454 | 1420 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13178-PA | 489 | GA13178-PA | 1..473 | 1..475 | 1817 | 71 | Plus |
Dpse\GA27575-PA | 455 | GA27575-PA | 1..454 | 1..454 | 1482 | 60.4 | Plus |
Dpse\GA27574-PA | 456 | GA27574-PA | 1..455 | 1..454 | 1420 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26162-PA | 480 | GM26162-PA | 1..480 | 1..480 | 2528 | 97.1 | Plus |
Dsec\GM26161-PA | 480 | GM26161-PA | 1..456 | 1..456 | 1969 | 78.5 | Plus |
Dsec\GM26158-PA | 487 | GM26158-PA | 1..477 | 1..478 | 1745 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20715-PA | 480 | GD20715-PA | 1..480 | 1..480 | 2528 | 97.1 | Plus |
Dsim\GD20714-PA | 480 | GD20714-PA | 1..456 | 1..456 | 1975 | 78.7 | Plus |
Dsim\GD20711-PA | 487 | GD20711-PA | 1..477 | 1..478 | 1744 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23991-PA | 494 | GJ23991-PA | 1..456 | 1..455 | 1658 | 64.9 | Plus |
Dvir\GJ11249-PA | 484 | GJ11249-PA | 1..455 | 1..454 | 1593 | 62 | Plus |
Dvir\GJ21935-PA | 500 | GJ21935-PA | 1..468 | 1..470 | 1515 | 58.6 | Plus |
Dvir\GJ21936-PA | 458 | GJ21936-PA | 1..455 | 1..454 | 1478 | 57.8 | Plus |
Dvir\GJ23990-PA | 487 | GJ23990-PA | 1..454 | 1..454 | 1436 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11284-PA | 498 | GK11284-PA | 1..455 | 1..454 | 1750 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24680-PA | 483 | GE24680-PA | 1..476 | 1..476 | 2379 | 91.4 | Plus |
Dyak\GE24679-PA | 484 | GE24679-PA | 1..456 | 1..456 | 1949 | 77.9 | Plus |
Dyak\GE24675-PA | 487 | GE24675-PA | 1..477 | 1..478 | 1744 | 67.5 | Plus |
Translation from 86 to 1528
> AT27928.hyp MKRVHVDNYAPKYYSGKWSWDSEKDCLNFQAHNDLENARERYIITNGYKF LRTIDQEEELIFRQEYVRAKSNTSDTVVLRDIRDLVLYLMPKDFLTYKFI EFMHEPQVQSVLHALTLYFEYYLRLVEFVLIRRDELSGQMAQIQSEQTTE MKKTYSVYLSHFRMLLARNYCEIIKGEGSMAKYYHMKPISNISATIHDKY FHEHFLAVSIQIVWICMHRRAYFVIEMEMNRLFRSEHFVSVRPEYLEFTE AERSLLYGRNNKNLNYRVQISPLVQELEHVVTEDLPILWIGKRKYRGTDP HIAQIELEYVVPGSQLRLIDLSHGILGHPKNLYNTLLNLDWPAVRFSNFS EQYDPYHIIRRNHLDIPKLGELEMRKFGESYEHFYEIFHFFEPVTHSHIC KWVKREINIAFFRSGGLLTNVVSRCEKELATAYEGQEVDKIIANYFKIVS NIRKVDYFESPRVSDVSTVKKGNFGKRQST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31391-PA | 480 | CG31391-PA | 1..480 | 1..480 | 2538 | 100 | Plus |
CG31467-PA | 480 | CG31467-PA | 1..456 | 1..456 | 1944 | 78.5 | Plus |
CG14689-PA | 487 | CG14689-PA | 1..477 | 1..478 | 1723 | 67.7 | Plus |