BDGP Sequence Production Resources |
Search the DGRC for AT28291
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 282 |
Well: | 91 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG14930-RA |
Protein status: | AT28291.pep: gold |
Preliminary Size: | 747 |
Sequenced Size: | 884 |
Gene | Date | Evidence |
---|---|---|
CG14930 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14930 | 2002-02-26 | Blastp of sequenced clone |
CG14930 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14930 | 2008-04-29 | Release 5.5 accounting |
CG14930 | 2008-08-15 | Release 5.9 accounting |
CG14930 | 2008-12-18 | 5.12 accounting |
884 bp (884 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089470
> AT28291.complete GCCTGTCAATCAATTACATTTGTAAAATGAACAAAAAACCAGAATACAAG CTAAGCGAGCGCGACTTAGACATCCGCTCTGATCTGGAGTTCGTAGATGG TATGCTGAAGGACCTGCAATTGGAGGTGGAGCCGCAGGCTCGTGGGGTCA TCTTGGATCTGGCTTATACTTTGGCAAGGGACAAACTCGTCGAGGCTCAA CGTTTCGCAAAGTTGGTCAATCGCACCAAAGTGAGTATCGAGGACTTGAA GATGGCCAACCTGGAGCGGACAGAGGAGCTGAGCAAGAGAGCGATCCATA CGCCGGTGAAGTCCCTTATTCCCAGCCAGGCATCTCTGCCCTCGCCGACT GTGAGCCGTGGACTGATGCTGCCCACCTGGCGGCAGTGTCAGATGGGTAC AATGGCCGAATTGAAGGACAAGGTCCCTGAGACTCAGCCACCGAATCCCA AGCCCGTGCCGCCCCTAACACCGGTAACAGCTTCTACTCCTGGTCTAAAC TCTGGCTCCAATTCGATGCTGACTACTGGATCTTCAAGCCCGGGTCTTAA GGCTTCACACTCCCTTGCTCCTCCCATTGGCACCAAGGCGAATCTTTTCG ACAATTTTACCTTGCCAACGATTTTACCCGATAGAGTTCGCAAGGATGCT CGTGGTAGCGCAATAAGAAGTCATTCTACTCCTAGGATGTACATCAATAG ATCCTATAGCTCGATGGCTGACGCAGCAGGAGGATCTCCCTCGGTCACAA AGAAACCACGCATGCAACTATGAAATAATCGAAATCTTTAAAATTATAAT ACTTTTATTACATTGGCAACTGTCAATTTATCGACGAGTTTGTGAATATT TTTAATGTTAATTACCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14930-RA | 866 | CG14930-RA | 1..866 | 1..866 | 4315 | 99.8 | Plus |
CG4970-RA | 2533 | CG4970-RA | 1545..2144 | 768..169 | 2985 | 99.8 | Minus |
CG14929-RA | 2533 | CG14929-RA | 1545..2144 | 768..169 | 2985 | 99.8 | Minus |
CG4970-RA | 2533 | CG4970-RA | 2207..2374 | 168..1 | 840 | 100 | Minus |
CG14929-RA | 2533 | CG14929-RA | 2207..2374 | 168..1 | 840 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11519083..11519780 | 169..866 | 100 | <- | Minus |
chr2L | 11519843..11520010 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..747 | 27..773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..747 | 27..773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..747 | 27..773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..747 | 27..773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..747 | 27..773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..866 | 1..866 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..866 | 1..866 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..866 | 1..866 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..866 | 1..866 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14930-RA | 1..866 | 1..866 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11520358..11521055 | 169..866 | 99 | <- | Minus |
2L | 11521118..11521285 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11520358..11521055 | 169..866 | 99 | <- | Minus |
2L | 11521118..11521285 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11520358..11521055 | 169..866 | 99 | <- | Minus |
2L | 11521118..11521285 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11520358..11521055 | 169..866 | 99 | <- | Minus |
arm_2L | 11521118..11521285 | 1..168 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11520358..11521055 | 169..866 | 99 | <- | Minus |
2L | 11521118..11521285 | 1..168 | 100 | Minus |
Translation from 2 to 772
> AT28291.hyp LSINYICKMNKKPEYKLSERDLDIRSDLEFVDGMLKDLQLEVEPQARGVI LDLAYTLARDKLVEAQRFAKLVNRTKVSIEDLKMANLERTEELSKRAIHT PVKSLIPSQASLPSPTVSRGLMLPTWRQCQMGTMAELKDKVPETQPPNPK PVPPLTPVTASTPGLNSGSNSMLTTGSSSPGLKASHSLAPPIGTKANLFD NFTLPTILPDRVRKDARGSAIRSHSTPRMYINRSYSSMADAAGGSPSVTK KPRMQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14930-PA | 248 | CG14930-PA | 1..248 | 9..256 | 1259 | 100 | Plus |
Translation from 26 to 772
> AT28291.pep MNKKPEYKLSERDLDIRSDLEFVDGMLKDLQLEVEPQARGVILDLAYTLA RDKLVEAQRFAKLVNRTKVSIEDLKMANLERTEELSKRAIHTPVKSLIPS QASLPSPTVSRGLMLPTWRQCQMGTMAELKDKVPETQPPNPKPVPPLTPV TASTPGLNSGSNSMLTTGSSSPGLKASHSLAPPIGTKANLFDNFTLPTIL PDRVRKDARGSAIRSHSTPRMYINRSYSSMADAAGGSPSVTKKPRMQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21355-PA | 949 | GF21355-PA | 9..127 | 13..130 | 308 | 47.1 | Plus |
Dana\GF14609-PA | 215 | GF14609-PA | 8..82 | 3..77 | 251 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13087-PA | 258 | GG13087-PA | 1..257 | 1..247 | 815 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18565-PA | 158 | GH18565-PA | 6..137 | 8..143 | 210 | 33.1 | Plus |
Dgri\GH19028-PA | 118 | GH19028-PA | 8..83 | 10..85 | 163 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14930-PA | 248 | CG14930-PA | 1..248 | 1..248 | 1259 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22966-PA | 158 | GI22966-PA | 6..132 | 7..137 | 277 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11960-PA | 179 | GL11960-PA | 8..134 | 11..130 | 143 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11059-PA | 250 | GM11059-PA | 1..250 | 1..248 | 1035 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22170-PA | 250 | GD22170-PA | 1..250 | 1..248 | 1021 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23513-PA | 157 | GJ23513-PA | 4..134 | 6..140 | 281 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24572-PA | 99 | GK24572-PA | 5..68 | 13..76 | 165 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12840-PA | 255 | GE12840-PA | 1..254 | 1..247 | 752 | 60.4 | Plus |