BDGP Sequence Production Resources |
Search the DGRC for AT28346
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 283 |
Well: | 46 |
Vector: | pOTB7 |
Associated Gene/Transcript | p53-RB |
Protein status: | AT28346.pep: gold |
Sequenced Size: | 1888 |
Gene | Date | Evidence |
---|---|---|
CG33336 | 2002-09-18 | Blastp of sequenced clone |
p53 | 2008-04-29 | Release 5.5 accounting |
p53 | 2008-08-15 | Release 5.9 accounting |
p53 | 2008-12-18 | 5.12 accounting |
1888 bp (1888 high quality bases) assembled on 2002-09-18
GenBank Submission: BT001357
> AT28346.complete CCTGGAGCACTGAAGATTCTTGCGGACACAAATCGCAACTGCTAAATAAA ATTTATTTATTTGAGTGCACAGCCATGAGTCTTCACAAGTCCGCGTCGTT TAGCTTGACTTTTAACCAAAACACTTCGATTGTTTCGCGTAGCAATAGTC GCACAATTTTTGAAGCTTTCAAGGAGTTCCTGGATTTTTGGGATATCGGC AACGAAGTTTCTGCAGAGTCAGCAGTTCGGGTCTCCAGCAACGGAGCTTT CAACTTGCCGCAGAGTTTTGGCAACGAATCCAACGAATATGCCCACCTGG CTACGCCTGTGGATCCAGCCTACGGAGGCAACAACACGAACAACATGATG CAGTTCACGAACAATCTGGAAATTTTGGCCAACAATAATTCCGATGGCAA TAACAAAATTAATGCATGCAACAAATTCGTCTGCCACAAGGGCACTGATT CCGAGGATGACTCCACGGAGGTCGATATCAAGGAGGATATTCCGAAAACG GTGGAGGTATCGGGATCGGAATTGACCACGGAACCCATGGCCTTCTTGCA GGGATTAAACTCCGGGAATCTGATGCAGTTCAGCCAGCAATCCGTGCTGC GCGAAATGATGCTGCAGGACATTCAGATCCAGGCGAACACGCTGCCCAAG CTAGAGAATCACAACATCGGTGGTTATTGCTTCAGCATGGTTCTGGATGA GCCGCCCAAGTCTCTTTGGATGTACTCGATTCCGCTGAACAAGCTCTACA TCCGGATGAACAAGGCCTTCAACGTGGACGTTCAGTTCAAGTCTAAAATG CCCATCCAACCACTTAATTTGCGTGTGTTCCTTTGCTTCTCCAATGATGT GAGTGCTCCCGTGGTCCGCTGTCAAAATCACCTTAGCGTTGAGCCTTTGA CGGCCAATAACGCAAAAATGCGCGAGAGCTTGCTGCGCAGCGAGAATCCC AACAGTGTATATTGTGGAAATGCTCAGGGCAAGGGAATTTCCGAGCGTTT TTCCGTTGTAGTCCCCCTGAACATGAGCCGGTCTGTAACCCGCAGTGGGC TCACGCGCCAGACCCTGGCCTTCAAGTTCGTCTGCCAAAACTCGTGTATC GGGCGAAAAGAAACTTCCTTAGTCTTCTGCCTGGAGAAAGCATGCGGCGA TATCGTGGGACAGCATGTTATACATGTTAAAATATGTACGTGCCCCAAGC GGGATCGCATCCAAGACGAACGCCAGCTCAATAGCAAGAAGCGCAAGTCC GTGCCGGAAGCCGCCGAAGAAGATGAGCCGTCCAAGGTGCGTCGGTGCAT TGCTATAAAGACGGAGGACACGGAGAGCAATGATAGCCGAGACTGCGACG ACTCCGCCGCAGAGTGGAACGTGTCGCGGACACCGGATGGCGATTACCGT CTGGCTATTACGTGCCCCAATAAGGAATGGCTGCTGCAGAGCATCGAGGG CATGATTAAGGAGGCGGCGGCTGAAGTCCTGCGCAATCCCAACCAAGAGA ATCTACGTCGCCATGCCAACAAATTGCTGAGCCTTAAGAAACGTGCCTAC GAGCTGCCATGACTTCTGATCTGGTCGACAATCTCCCAGGTATCAGATAC CTTTGAAATGTGTTGCATCTGTGGGGTATACTACATAGCTATTAGTATCT TAAGTTTGTATTAGTCCTTGTTCGTAAGGCGTTTAACGGTGATATTCCCC TTTTGGCATGTTCGATGGCCGAAAAGAAAACATTTTTATATTTTTGATAG TATACTGTTGTTAACTGCAGTTCTATGTGACTACGTAACTTTTGTCTACC ACAACAAACATACTCTGTACAAAAAAGCCAAAAGTGAATTTATTAAAGAG TTGTCATATTTTGCAAACATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
p53-RB | 1886 | p53-RB | 17..1886 | 1..1870 | 9335 | 99.9 | Plus |
p53-RC | 2171 | p53-RC | 667..2096 | 442..1871 | 7150 | 100 | Plus |
p53-RA | 1705 | p53-RA | 201..1630 | 442..1871 | 7150 | 100 | Plus |
p53-RC | 2171 | p53-RC | 1..442 | 1..442 | 2195 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18873456..18873851 | 1539..1144 | 1980 | 100 | Minus |
chr3R | 27901430 | chr3R | 18873066..18873396 | 1870..1540 | 1655 | 100 | Minus |
chr3R | 27901430 | chr3R | 18876991..18877314 | 442..119 | 1620 | 100 | Minus |
chr3R | 27901430 | chr3R | 18874224..18874536 | 897..585 | 1505 | 98.7 | Minus |
chr3R | 27901430 | chr3R | 18873913..18874159 | 1144..898 | 1205 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 18877374..18877491 | 118..1 | 575 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 18876527..18876609 | 524..442 | 415 | 100 | Minus |
chr3R | 27901430 | chr3R | 18876421..18876457 | 560..524 | 185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23050047..23050442 | 1539..1144 | 1980 | 100 | Minus |
3R | 32079331 | 3R | 23049656..23049987 | 1871..1540 | 1660 | 100 | Minus |
3R | 32079331 | 3R | 23053582..23053905 | 442..119 | 1620 | 100 | Minus |
3R | 32079331 | 3R | 23050815..23051127 | 897..585 | 1565 | 100 | Minus |
3R | 32079331 | 3R | 23050504..23050750 | 1144..898 | 1235 | 100 | Minus |
3R | 32079331 | 3R | 23053965..23054082 | 118..1 | 575 | 99.2 | Minus |
3R | 32079331 | 3R | 23053118..23053200 | 524..442 | 415 | 100 | Minus |
3R | 32079331 | 3R | 23053012..23053048 | 560..524 | 185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22790878..22791273 | 1539..1144 | 1980 | 100 | Minus |
3R | 31820162 | 3R | 22790487..22790818 | 1871..1540 | 1660 | 100 | Minus |
3R | 31820162 | 3R | 22794413..22794736 | 442..119 | 1620 | 100 | Minus |
3R | 31820162 | 3R | 22791646..22791958 | 897..585 | 1565 | 100 | Minus |
3R | 31820162 | 3R | 22791335..22791581 | 1144..898 | 1235 | 100 | Minus |
3R | 31820162 | 3R | 22794796..22794913 | 118..1 | 575 | 99.1 | Minus |
3R | 31820162 | 3R | 22793949..22794031 | 524..442 | 415 | 100 | Minus |
3R | 31820162 | 3R | 22793843..22793879 | 560..524 | 185 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18876421..18876457 | 524..560 | 100 | <- | Minus |
chr3R | 18876528..18876608 | 443..523 | 100 | <- | Minus |
chr3R | 18873066..18873396 | 1540..1870 | 100 | <- | Minus |
chr3R | 18873456..18873850 | 1145..1539 | 100 | <- | Minus |
chr3R | 18873913..18874159 | 898..1144 | 99 | <- | Minus |
chr3R | 18874224..18874533 | 588..897 | 98 | <- | Minus |
chr3R | 18876331..18876357 | 561..587 | 100 | <- | Minus |
chr3R | 18876991..18877314 | 119..442 | 100 | <- | Minus |
chr3R | 18877374..18877491 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1488 | 75..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1488 | 75..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1488 | 75..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1488 | 75..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1488 | 75..1562 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1870 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1870 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1870 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1870 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p53-RB | 1..1870 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23050047..23050441 | 1145..1539 | 100 | <- | Minus |
3R | 23050504..23050750 | 898..1144 | 100 | <- | Minus |
3R | 23049657..23049987 | 1540..1870 | 100 | <- | Minus |
3R | 23050815..23051124 | 588..897 | 100 | <- | Minus |
3R | 23052922..23052948 | 561..587 | 100 | <- | Minus |
3R | 23053012..23053048 | 524..560 | 100 | <- | Minus |
3R | 23053119..23053199 | 443..523 | 100 | <- | Minus |
3R | 23053582..23053905 | 119..442 | 100 | <- | Minus |
3R | 23053965..23054082 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23050047..23050441 | 1145..1539 | 100 | <- | Minus |
3R | 23050504..23050750 | 898..1144 | 100 | <- | Minus |
3R | 23049657..23049987 | 1540..1870 | 100 | <- | Minus |
3R | 23050815..23051124 | 588..897 | 100 | <- | Minus |
3R | 23052922..23052948 | 561..587 | 100 | <- | Minus |
3R | 23053012..23053048 | 524..560 | 100 | <- | Minus |
3R | 23053119..23053199 | 443..523 | 100 | <- | Minus |
3R | 23053582..23053905 | 119..442 | 100 | <- | Minus |
3R | 23053965..23054082 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23050047..23050441 | 1145..1539 | 100 | <- | Minus |
3R | 23050504..23050750 | 898..1144 | 100 | <- | Minus |
3R | 23049657..23049987 | 1540..1870 | 100 | <- | Minus |
3R | 23050815..23051124 | 588..897 | 100 | <- | Minus |
3R | 23052922..23052948 | 561..587 | 100 | <- | Minus |
3R | 23053012..23053048 | 524..560 | 100 | <- | Minus |
3R | 23053119..23053199 | 443..523 | 100 | <- | Minus |
3R | 23053582..23053905 | 119..442 | 100 | <- | Minus |
3R | 23053965..23054082 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18875379..18875709 | 1540..1870 | 100 | <- | Minus |
arm_3R | 18875769..18876163 | 1145..1539 | 100 | <- | Minus |
arm_3R | 18876226..18876472 | 898..1144 | 100 | <- | Minus |
arm_3R | 18876537..18876846 | 588..897 | 100 | <- | Minus |
arm_3R | 18878644..18878670 | 561..587 | 100 | <- | Minus |
arm_3R | 18878734..18878770 | 524..560 | 100 | <- | Minus |
arm_3R | 18878841..18878921 | 443..523 | 100 | <- | Minus |
arm_3R | 18879304..18879627 | 119..442 | 100 | <- | Minus |
arm_3R | 18879687..18879804 | 1..118 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22790488..22790818 | 1540..1870 | 100 | <- | Minus |
3R | 22790878..22791272 | 1145..1539 | 100 | <- | Minus |
3R | 22791335..22791581 | 898..1144 | 100 | <- | Minus |
3R | 22791646..22791955 | 588..897 | 100 | <- | Minus |
3R | 22793753..22793779 | 561..587 | 100 | <- | Minus |
3R | 22793843..22793879 | 524..560 | 100 | <- | Minus |
3R | 22793950..22794030 | 443..523 | 100 | <- | Minus |
3R | 22794413..22794736 | 119..442 | 100 | <- | Minus |
3R | 22794796..22794913 | 1..118 | 99 | Minus |
Translation from 2 to 1561
> AT28346.hyp WSTEDSCGHKSQLLNKIYLFECTAMSLHKSASFSLTFNQNTSIVSRSNSR TIFEAFKEFLDFWDIGNEVSAESAVRVSSNGAFNLPQSFGNESNEYAHLA TPVDPAYGGNNTNNMMQFTNNLEILANNNSDGNNKINACNKFVCHKGTDS EDDSTEVDIKEDIPKTVEVSGSELTTEPMAFLQGLNSGNLMQFSQQSVLR EMMLQDIQIQANTLPKLENHNIGGYCFSMVLDEPPKSLWMYSIPLNKLYI RMNKAFNVDVQFKSKMPIQPLNLRVFLCFSNDVSAPVVRCQNHLSVEPLT ANNAKMRESLLRSENPNSVYCGNAQGKGISERFSVVVPLNMSRSVTRSGL TRQTLAFKFVCQNSCIGRKETSLVFCLEKACGDIVGQHVIHVKICTCPKR DRIQDERQLNSKKRKSVPEAAEEDEPSKVRRCIAIKTEDTESNDSRDCDD SAAEWNVSRTPDGDYRLAITCPNKEWLLQSIEGMIKEAAAEVLRNPNQEN LRRHANKLLSLKKRAYELP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
p53-PB | 495 | CG33336-PB | 1..495 | 25..519 | 2581 | 100 | Plus |
p53-PC | 385 | CG33336-PC | 12..385 | 146..519 | 1935 | 99.5 | Plus |
p53-PA | 385 | CG33336-PA | 12..385 | 146..519 | 1935 | 99.5 | Plus |
p53-PE | 334 | CG33336-PE | 10..334 | 195..519 | 1695 | 99.7 | Plus |
Translation from 74 to 1561
> AT28346.pep MSLHKSASFSLTFNQNTSIVSRSNSRTIFEAFKEFLDFWDIGNEVSAESA VRVSSNGAFNLPQSFGNESNEYAHLATPVDPAYGGNNTNNMMQFTNNLEI LANNNSDGNNKINACNKFVCHKGTDSEDDSTEVDIKEDIPKTVEVSGSEL TTEPMAFLQGLNSGNLMQFSQQSVLREMMLQDIQIQANTLPKLENHNIGG YCFSMVLDEPPKSLWMYSIPLNKLYIRMNKAFNVDVQFKSKMPIQPLNLR VFLCFSNDVSAPVVRCQNHLSVEPLTANNAKMRESLLRSENPNSVYCGNA QGKGISERFSVVVPLNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKETSLV FCLEKACGDIVGQHVIHVKICTCPKRDRIQDERQLNSKKRKSVPEAAEED EPSKVRRCIAIKTEDTESNDSRDCDDSAAEWNVSRTPDGDYRLAITCPNK EWLLQSIEGMIKEAAAEVLRNPNQENLRRHANKLLSLKKRAYELP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18271-PA | 368 | GF18271-PA | 14..368 | 151..495 | 1205 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12467-PA | 508 | GG12467-PA | 1..508 | 1..495 | 2029 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18203-PA | 359 | GH18203-PA | 1..329 | 155..488 | 1093 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
p53-PB | 495 | CG33336-PB | 1..495 | 1..495 | 2581 | 100 | Plus |
p53-PC | 385 | CG33336-PC | 12..385 | 122..495 | 1935 | 99.5 | Plus |
p53-PA | 385 | CG33336-PA | 12..385 | 122..495 | 1935 | 99.5 | Plus |
p53-PE | 334 | CG33336-PE | 10..334 | 171..495 | 1695 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10763-PA | 351 | GI10763-PA | 2..351 | 153..495 | 1168 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27356-PA | 386 | GL27356-PA | 14..361 | 151..490 | 1270 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27050-PA | 386 | GA27050-PA | 14..361 | 151..490 | 1263 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23598-PA | 489 | GM23598-PA | 1..489 | 1..495 | 2259 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18411-PA | 489 | GD18411-PA | 1..489 | 1..495 | 2291 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14364-PA | 349 | GJ14364-PA | 1..349 | 153..494 | 1150 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11606-PA | 377 | GK11606-PA | 12..371 | 148..490 | 1151 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23990-PA | 507 | GE23990-PA | 1..507 | 1..495 | 1978 | 76.5 | Plus |