BDGP Sequence Production Resources |
Search the DGRC for AT28535
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 285 |
Well: | 35 |
Vector: | pOTB7 |
Associated Gene/Transcript | PP2A-B'-RC |
Protein status: | AT28535.pep: gold |
Sequenced Size: | 1842 |
Gene | Date | Evidence |
---|---|---|
PP2A-B'-RC | 2009-06-22 | Replacement based on scoring |
1842 bp assembled on 2009-08-03
GenBank Submission: BT089024.1
> AT28535.complete AACCGTTGACATGGGAAAAGATAATCAGATAAGTGTCATTTATGCCCCTT TGCAGGCTAACAAACTCAAGGACAACACACCACCGTACGATGCACCGCCG CCCACGCCGATCAGCAAGGTCCTGAACATCACCGGCACTCCGATCGTTCG CAAGGAGAAGCGCCAGACCAGCGCCCGGTACAATGCCTCCAAGAACTGCG AACTGACGGCCCTCATTCCGCTAAACGAGAAGACCGCCGCCAGTGAACGT GAGGAGCTGTTCATACAGAAGATCCAGCAATGCTGCACACTGTTCGACTT CTCCGAGCCGCTCAGCGACCTCAAGTTCAAGGAGGTGAAGCGGGCGGCTC TGCACGAAATGGTCGATTTCCTCACCAACCAAAATGGCGTAATAACCGAA GTTATTTACCCGGAGGCGATCAATATGTTTGCTGTCAACCTTTTCCGAAC TCTGCCGCCATCGTCCAACCCGAATGGTGCCGAATTCGATCCGGAGGAGG ATGAGCCCACGTTGGAGTCCTCGTGGCCGCATCTGCAACTCGTTTACGAG CTGTTCTTGCGCTTCTTGGAGTCACCAGATTTTCAACCAAGCATGGCAAA ACGTTTTATCGACCATCAATTTGTATTACAACTATTGGATTTATTCGATT CGGAGGATCCACGTGAACGTGATTTCCTGAAGACTGTTTTACATCGCATC TATGGAAAATTTTTGGGCTTGAGAGCATTTATTAGAAAGCAGATCAACAA TGTCTTTTACAGATTTATTTATGAAACGGAGCATCATAATGGCATAGCCG AATTGTTGGAAATCCTGGGTAGCATTATCAATGGCTTTGCTCTGCCGCTT AAGGAGGAGCATAAACAATTTTTACTTAAGGTATTGCTGCCATTGCACAA AGCCAAGAGCCTCTCGGTCTACCATCCGCAGCTCACCTATTGTGTGGTGC AGTTCCTGGAGAAGGATCCTAGCTTATCGGAGGCGGTCATCAAAAGCCTA CTTAAATTTTGGCCCAAGACGCACAGTCCCAAGGAGGTTATGTTTTTGAA CGAGCTGGAGGAGCTGTTGGACGTAATTGAGCCGGCCGAGTTCCAGAAGG TGATGGTGCCGCTGTTCCGCCAAATAGCCAAGTGCGTCTCTTCGCCTCAT TTCCAGGTGGCCGAGCGTGCGTTGTACTATTGGAACAACGAGTACATTAT GTCGCTGATAACGGATAACTCGGCGGTGATATTACCCATTATGTTCCCAG CGCTCAATCGCAACTCAAAGACGCACTGGAACAAGACCATCCATGGTCTG ATCTACAATGCACTCAAGCTGTTCATGGAGATAGATCAGCGGCTTTTCGA CGAGTGCAGCAAGAACTACAAGCAAGAGAAGCAGATGGAGCGTGAGAAGC TGTCGCAAAGGGAGGAGCTCTGGCAACAGGTGGAGAGCTTGGCCAAGACC AACCCGGAGTGGACAAAGGCGCGCCGGTTTAACGACTGCCTGCCGGTCAG CGACAGCCGGGCCCTGTGCGATCAATATAGTGAGAACAGCGATTCAGCGT ATGATCAGAGCGAGCAGAGGGCGCGCCAGCCGCCGCCTCCGCTGCCGCCA CAGAAACAGGCGCACCAGGAGCCCCGAGAGGTGAGACAGGCACTTGCCAC ATTAACAACACTAAACAACTACTAATCCGCCACGTGTGATCCTGGCGTCG CTGTGAGCTGTGCCCAGCTAAGGCCCACTCTGTTTCAACTCTAATTCTAA TCGAACGAATGTCTGTTAAAATAATCACACTCATGTCATTTAAAAAAAAA AAATACATATTTGTATATCTTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 14001167..14001602 | 1387..1822 | 2165 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 14000671..14001064 | 994..1387 | 1940 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 13999966..14000301 | 427..762 | 1680 | 100 | Plus |
chr3R | 27901430 | chr3R | 14000366..14000598 | 761..993 | 1150 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 13995840..13996069 | 1..230 | 1135 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 13999697..13999893 | 231..427 | 985 | 100 | Plus |
chr3R | 27901430 | chr3R | 23389565..23389704 | 783..644 | 205 | 76.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 18176805..18177243 | 1387..1824 | 2145 | 99.8 | Plus |
3R | 32079331 | 3R | 18176307..18176700 | 994..1387 | 1940 | 99.5 | Plus |
3R | 32079331 | 3R | 18175602..18175937 | 427..762 | 1680 | 100 | Plus |
3R | 32079331 | 3R | 18176002..18176234 | 761..993 | 1165 | 100 | Plus |
3R | 32079331 | 3R | 18171474..18171703 | 1..230 | 1135 | 99.6 | Plus |
3R | 32079331 | 3R | 18175333..18175529 | 231..427 | 985 | 100 | Plus |
3R | 32079331 | 3R | 27566644..27566783 | 783..644 | 205 | 76.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 17917636..17918074 | 1387..1824 | 2155 | 99.7 | Plus |
3R | 31820162 | 3R | 17917138..17917531 | 994..1387 | 1940 | 99.4 | Plus |
3R | 31820162 | 3R | 17916433..17916768 | 427..762 | 1680 | 100 | Plus |
3R | 31820162 | 3R | 17916833..17917065 | 761..993 | 1165 | 100 | Plus |
3R | 31820162 | 3R | 17912305..17912534 | 1..230 | 1135 | 99.5 | Plus |
3R | 31820162 | 3R | 17916164..17916360 | 231..427 | 985 | 100 | Plus |
3R | 31820162 | 3R | 27307475..27307614 | 783..644 | 205 | 76.4 | Minus |
3R | 31820162 | 3R | 27307225..27307367 | 969..827 | 145 | 73.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 13995840..13996069 | 1..230 | 99 | -> | Plus |
chr3R | 13999697..13999893 | 231..427 | 100 | -> | Plus |
chr3R | 13999967..14000301 | 428..762 | 100 | -> | Plus |
chr3R | 14000368..14000598 | 763..993 | 99 | -> | Plus |
chr3R | 14000671..14001063 | 994..1386 | 99 | -> | Plus |
chr3R | 14001167..14001564 | 1387..1784 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PP2A-B'-RC | 1..1665 | 11..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PP2A-B'-RC | 1..1665 | 11..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PP2A-B'-RC | 1..1665 | 11..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PP2A-B'-RC | 1..1665 | 11..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PP2A-B'-RC | 1..1823 | 1..1822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PP2A-B'-RC | 1..1823 | 1..1822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PP2A-B'-RC | 1..1823 | 1..1822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PP2A-B'-RC | 1..1823 | 1..1822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18176004..18176234 | 763..993 | 100 | -> | Plus |
3R | 18171474..18171703 | 1..230 | 99 | -> | Plus |
3R | 18175333..18175529 | 231..427 | 100 | -> | Plus |
3R | 18175603..18175937 | 428..762 | 100 | -> | Plus |
3R | 18176307..18176699 | 994..1386 | 99 | -> | Plus |
3R | 18176805..18177241 | 1387..1822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18176004..18176234 | 763..993 | 100 | -> | Plus |
3R | 18171474..18171703 | 1..230 | 99 | -> | Plus |
3R | 18175333..18175529 | 231..427 | 100 | -> | Plus |
3R | 18175603..18175937 | 428..762 | 100 | -> | Plus |
3R | 18176307..18176699 | 994..1386 | 99 | -> | Plus |
3R | 18176805..18177241 | 1387..1822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18176004..18176234 | 763..993 | 100 | -> | Plus |
3R | 18171474..18171703 | 1..230 | 99 | -> | Plus |
3R | 18175333..18175529 | 231..427 | 100 | -> | Plus |
3R | 18175603..18175937 | 428..762 | 100 | -> | Plus |
3R | 18176307..18176699 | 994..1386 | 99 | -> | Plus |
3R | 18176805..18177241 | 1387..1822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 13997196..13997425 | 1..230 | 99 | -> | Plus |
arm_3R | 14001055..14001251 | 231..427 | 100 | -> | Plus |
arm_3R | 14001325..14001659 | 428..762 | 100 | -> | Plus |
arm_3R | 14001726..14001956 | 763..993 | 100 | -> | Plus |
arm_3R | 14002029..14002421 | 994..1386 | 99 | -> | Plus |
arm_3R | 14002527..14002963 | 1387..1822 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17916835..17917065 | 763..993 | 100 | -> | Plus |
3R | 17912305..17912534 | 1..230 | 99 | -> | Plus |
3R | 17916164..17916360 | 231..427 | 100 | -> | Plus |
3R | 17916434..17916768 | 428..762 | 100 | -> | Plus |
3R | 17917138..17917530 | 994..1386 | 99 | -> | Plus |
3R | 17917636..17918072 | 1387..1822 | 99 | Plus |
Translation from 1 to 1674
> AT28535.hyp TVDMGKDNQISVIYAPLQANKLKDNTPPYDAPPPTPISKVLNITGTPIVR KEKRQTSARYNASKNCELTALIPLNEKTAASEREELFIQKIQQCCTLFDF SEPLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYPEAINMFAVNLFRT LPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLRFLESPDFQPSMAK RFIDHQFVLQLLDLFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN VFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKQFLLKVLLPLHK AKSLSVYHPQLTYCVVQFLEKDPSLSEAVIKSLLKFWPKTHSPKEVMFLN ELEELLDVIEPAEFQKVMVPLFRQIAKCVSSPHFQVAERALYYWNNEYIM SLITDNSAVILPIMFPALNRNSKTHWNKTIHGLIYNALKLFMEIDQRLFD ECSKNYKQEKQMEREKLSQREELWQQVESLAKTNPEWTKARRFNDCLPVS DSRALCDQYSENSDSAYDQSEQRARQPPPPLPPQKQAHQEPREVRQALAT LTTLNNY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PP2A-B'-PC | 554 | CG7913-PC | 1..554 | 4..557 | 2900 | 100 | Plus |
PP2A-B'-PP | 683 | CG7913-PP | 140..683 | 14..557 | 2829 | 99.3 | Plus |
PP2A-B'-PN | 670 | CG7913-PN | 132..670 | 19..557 | 2824 | 100 | Plus |
PP2A-B'-PM | 670 | CG7913-PM | 132..670 | 19..557 | 2824 | 100 | Plus |
PP2A-B'-PL | 670 | CG7913-PL | 132..670 | 19..557 | 2824 | 100 | Plus |
Translation from 1 to 1674
> AT28535.pep TVDMGKDNQISVIYAPLQANKLKDNTPPYDAPPPTPISKVLNITGTPIVR KEKRQTSARYNASKNCELTALIPLNEKTAASEREELFIQKIQQCCTLFDF SEPLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYPEAINMFAVNLFRT LPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLRFLESPDFQPSMAK RFIDHQFVLQLLDLFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINN VFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKQFLLKVLLPLHK AKSLSVYHPQLTYCVVQFLEKDPSLSEAVIKSLLKFWPKTHSPKEVMFLN ELEELLDVIEPAEFQKVMVPLFRQIAKCVSSPHFQVAERALYYWNNEYIM SLITDNSAVILPIMFPALNRNSKTHWNKTIHGLIYNALKLFMEIDQRLFD ECSKNYKQEKQMEREKLSQREELWQQVESLAKTNPEWTKARRFNDCLPVS DSRALCDQYSENSDSAYDQSEQRARQPPPPLPPQKQAHQEPREVRQALAT LTTLNNY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16761-PA | 968 | GF16761-PA | 419..923 | 43..545 | 2266 | 88.6 | Plus |
Dana\GF18705-PA | 859 | GF18705-PA | 367..785 | 59..480 | 1601 | 69.2 | Plus |
Dana\GF16760-PA | 175 | GF16760-PA | 113..172 | 18..76 | 178 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22681-PA | 701 | GG22681-PA | 130..656 | 19..545 | 2787 | 97.5 | Plus |
Dere\GG12108-PA | 524 | GG12108-PA | 30..448 | 59..480 | 1585 | 69.2 | Plus |
Dere\GG19075-PA | 310 | GG19075-PA | 30..304 | 179..456 | 567 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15123-PA | 990 | GH15123-PA | 445..923 | 43..525 | 2230 | 86.1 | Plus |
Dgri\GH21692-PA | 538 | GH21692-PA | 30..448 | 59..480 | 1582 | 68.7 | Plus |
Dgri\GH15112-PA | 165 | GH15112-PA | 104..163 | 18..76 | 220 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wrd-PC | 554 | CG7913-PC | 1..554 | 4..557 | 2900 | 100 | Plus |
wrd-PP | 683 | CG7913-PP | 140..683 | 14..557 | 2829 | 99.3 | Plus |
wrd-PN | 670 | CG7913-PN | 132..670 | 19..557 | 2824 | 100 | Plus |
wrd-PM | 670 | CG7913-PM | 132..670 | 19..557 | 2824 | 100 | Plus |
wrd-PL | 670 | CG7913-PL | 132..670 | 19..557 | 2824 | 100 | Plus |
wrd-PD | 670 | CG7913-PD | 132..670 | 19..557 | 2824 | 100 | Plus |
wrd-PE | 670 | CG7913-PE | 132..670 | 19..557 | 2824 | 100 | Plus |
wrd-PQ | 716 | CG7913-PQ | 140..671 | 14..545 | 2769 | 99.1 | Plus |
wrd-PJ | 703 | CG7913-PJ | 132..658 | 19..545 | 2764 | 99.8 | Plus |
wrd-PO | 656 | CG7913-PO | 132..656 | 19..543 | 2756 | 100 | Plus |
wrd-PK | 656 | CG7913-PK | 132..656 | 19..543 | 2756 | 100 | Plus |
wrd-PA | 951 | CG7913-PA | 433..951 | 34..557 | 2523 | 93.5 | Plus |
wrd-PB | 984 | CG7913-PB | 433..939 | 34..545 | 2463 | 93.2 | Plus |
wrd-PI | 438 | CG7913-PI | 1..438 | 120..557 | 2301 | 100 | Plus |
wdb-PF | 524 | CG5643-PF | 23..448 | 52..480 | 1577 | 68.8 | Plus |
wdb-PE | 524 | CG5643-PE | 23..448 | 52..480 | 1577 | 68.8 | Plus |
wdb-PC | 524 | CG5643-PC | 23..448 | 52..480 | 1577 | 68.8 | Plus |
wdb-PA | 524 | CG5643-PA | 23..448 | 52..480 | 1577 | 68.8 | Plus |
wdb-PD | 524 | CG5643-PD | 23..448 | 52..480 | 1577 | 68.8 | Plus |
wdb-PB | 524 | CG5643-PB | 23..448 | 52..480 | 1577 | 68.8 | Plus |
CG32568-PC | 325 | CG32568-PC | 31..276 | 181..426 | 482 | 38.6 | Plus |
CG32568-PB | 325 | CG32568-PB | 31..276 | 181..426 | 482 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23720-PA | 972 | GI23720-PA | 416..926 | 35..545 | 2234 | 82.9 | Plus |
Dmoj\GI10753-PA | 707 | GI10753-PA | 215..633 | 59..480 | 1588 | 68.7 | Plus |
Dmoj\GI15981-PA | 471 | GI15981-PA | 25..445 | 61..481 | 908 | 43.4 | Plus |
Dmoj\GI23719-PA | 157 | GI23719-PA | 86..154 | 11..76 | 217 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12593-PA | 761 | GL12593-PA | 137..715 | 18..545 | 2343 | 81.4 | Plus |
Dper\GL23581-PA | 534 | GL23581-PA | 31..449 | 59..480 | 1584 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30019-PA | 680 | GA30019-PA | 135..680 | 18..557 | 2474 | 89 | Plus |
Dpse\GA30019-PC | 714 | GA30019-PC | 135..668 | 18..545 | 2407 | 88.6 | Plus |
Dpse\GA30019-PB | 959 | GA30019-PB | 444..959 | 43..557 | 2280 | 86.6 | Plus |
Dpse\GA26642-PA | 536 | GA26642-PA | 31..449 | 59..480 | 1584 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16338-PA | 512 | GM16338-PA | 30..436 | 59..480 | 1501 | 66.6 | Plus |
Dsec\GM20543-PA | 326 | GM20543-PA | 22..300 | 171..449 | 464 | 36.6 | Plus |
Dsec\GM15281-PA | 298 | GM15281-PA | 129..190 | 19..80 | 240 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18073-PA | 676 | GD18073-PA | 227..600 | 59..480 | 1315 | 59.7 | Plus |
Dsim\GD17304-PA | 323 | GD17304-PA | 22..297 | 171..449 | 426 | 35.1 | Plus |
Dsim\GD19205-PA | 188 | GD19205-PA | 129..187 | 19..77 | 323 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23278-PA | 506 | GJ23278-PA | 1..506 | 49..557 | 2435 | 89.8 | Plus |
Dvir\GJ10695-PA | 537 | GJ10695-PA | 30..448 | 59..480 | 1580 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11246-PA | 984 | GK11246-PA | 450..938 | 70..545 | 2202 | 87.6 | Plus |
Dwil\GK11331-PA | 526 | GK11331-PA | 30..448 | 59..480 | 1593 | 69.2 | Plus |
Dwil\GK11245-PA | 202 | GK11245-PA | 137..195 | 23..76 | 216 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25516-PA | 832 | GE25516-PA | 131..573 | 20..462 | 2335 | 97.3 | Plus |
Dyak\GE10557-PA | 524 | GE10557-PA | 30..448 | 59..480 | 1585 | 69.2 | Plus |
Dyak\GE25516-PA | 832 | GE25516-PA | 507..787 | 277..545 | 1076 | 77.6 | Plus |
Dyak\GE17620-PA | 260 | GE17620-PA | 1..239 | 211..449 | 490 | 41 | Plus |