BDGP Sequence Production Resources |
Search the DGRC for AT28833
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 288 |
Well: | 33 |
Vector: | pOTB7 |
Associated Gene/Transcript | RpL24-like-RA |
Protein status: | AT28833.pep: gold |
Preliminary Size: | 701 |
Sequenced Size: | 885 |
Gene | Date | Evidence |
---|---|---|
CG6764 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6764 | 2002-04-21 | Blastp of sequenced clone |
CG6764 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6764 | 2008-04-29 | Release 5.5 accounting |
CG6764 | 2008-08-15 | Release 5.9 accounting |
CG6764 | 2008-12-18 | 5.12 accounting |
885 bp (885 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113325
> AT28833.complete CTTGCTTGGATATTTTTTGTCTACATCTAGCTATTTTCCATGTTAGCCAG TGTTATCGATAAGCAGTGACTGGTCGCACTGCTGACTGCCGATACATTTT CATATTTCTTCTTCTTCAGCAGCACACGTGCTAGCAGCTTGCGCATTTGT TTTGTTTTCGTAATTTATCCGTCGTAAATTGCGAAAATGCGCATTCAAAC GTGCTATTTTTGCTCTAGCAAAATATACCCGGGCCACGGGGTGCAATTCG TGCGAAATGACTGCAAGGTCTTCAAGTTCTGCCGAGGCAAGTGTCACAAG GCCTTTAAGCGCAAGAAGAATCCCCGCAAGGTAGGATGGACGAAGGCGTA CCGCAAGGCCGCCGGCAAGGAGCTGGCCATCGATCCCAGTTTCGAGTTCG AGAAGCGCCGCAACGTGCCCATGAAATACAGCCGCGAGACCTGGCAGAAG GGTCTGGAGGCCATCAAGCGGGTGACGGAGATTAAGGAGAAACGCACCAG CCACTTTGTCATGGAGCGACTGCGCAAGGGTCGCCAGGTCGAGATTCAGA TGGACGTCAAGGATGTGCAGCGCAACATGTCCCTGATTCGCTCCCCAGCC GCAGGGCTGAAGCAACGACGTGCCCAGGAGGCGGCAGAGGAGGCCGCCCT CATGGAGGAGGATCTGCCCGAGGAGAAGATCACCTACGTGGATGCACGCG AACTCGAGAAGAAACTGGAGGAGGGAATGGGGGTCGAGGATCTCGAGATG TTAGAAGCCTAAGGACGAGTACGCTGATTTTTTCTTAGTTTAAGTTGCTG CTAAAAAATACATTATATAAAAACCCCGTGGTACATAAATGTTGTCTTTG GTTGTTATATATTTTCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6764-RA | 903 | CG6764-RA | 1..869 | 1..869 | 4345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7256210..7256808 | 268..866 | 100 | <- | Minus |
chr3R | 7256879..7257145 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6764-RA | 1..576 | 187..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL24-like-RA | 1..576 | 187..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL24-like-RA | 1..576 | 187..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6764-RA | 1..576 | 187..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL24-like-RA | 1..576 | 187..762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6764-RA | 1..866 | 1..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL24-like-RA | 1..866 | 1..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL24-like-RA | 1..773 | 94..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6764-RA | 1..866 | 1..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL24-like-RA | 1..773 | 94..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11430740..11431338 | 268..866 | 100 | <- | Minus |
3R | 11431409..11431675 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11430740..11431338 | 268..866 | 100 | <- | Minus |
3R | 11431409..11431675 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11430740..11431338 | 268..866 | 100 | <- | Minus |
3R | 11431409..11431675 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7256462..7257060 | 268..866 | 100 | <- | Minus |
arm_3R | 7257131..7257397 | 1..267 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11171571..11172169 | 268..866 | 100 | <- | Minus |
3R | 11172240..11172506 | 1..267 | 100 | Minus |
Translation from 186 to 761
> AT28833.pep MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVG WTKAYRKAAGKELAIDPSFEFEKRRNVPMKYSRETWQKGLEAIKRVTEIK EKRTSHFVMERLRKGRQVEIQMDVKDVQRNMSLIRSPAAGLKQRRAQEAA EEAALMEEDLPEEKITYVDARELEKKLEEGMGVEDLEMLEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18157-PA | 191 | GF18157-PA | 1..191 | 1..191 | 894 | 92.1 | Plus |
Dana\GF21662-PA | 155 | GF21662-PA | 1..57 | 1..57 | 154 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17222-PA | 191 | GG17222-PA | 1..191 | 1..191 | 908 | 94.2 | Plus |
Dere\GG10203-PA | 154 | GG10203-PA | 1..56 | 2..57 | 150 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23979-PA | 191 | GH23979-PA | 1..191 | 1..191 | 844 | 87.4 | Plus |
Dgri\GH11098-PA | 155 | GH11098-PA | 1..57 | 1..57 | 154 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL24-like-PA | 191 | CG6764-PA | 1..191 | 1..191 | 994 | 100 | Plus |
RpL24-PC | 155 | CG9282-PC | 1..142 | 1..151 | 172 | 30.5 | Plus |
RpL24-PB | 155 | CG9282-PB | 1..142 | 1..151 | 172 | 30.5 | Plus |
RpL24-PA | 155 | CG9282-PA | 1..142 | 1..151 | 172 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10058-PA | 191 | GI10058-PA | 1..191 | 1..191 | 787 | 85.3 | Plus |
Dmoj\GI18222-PA | 155 | GI18222-PA | 1..57 | 1..57 | 154 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12604-PA | 192 | GL12604-PA | 1..192 | 1..191 | 864 | 89.1 | Plus |
Dper\GL25708-PA | 155 | GL25708-PA | 1..57 | 1..57 | 136 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19846-PA | 192 | GA19846-PA | 1..192 | 1..191 | 864 | 89.1 | Plus |
Dpse\GA22528-PA | 155 | GA22528-PA | 1..57 | 1..57 | 152 | 49.1 | Plus |
Dpse\GA21667-PA | 155 | GA21667-PA | 1..57 | 1..57 | 152 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26099-PA | 191 | GM26099-PA | 1..191 | 1..191 | 1000 | 97.9 | Plus |
Dsec\GM25565-PA | 155 | GM25565-PA | 1..57 | 1..57 | 152 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20660-PA | 191 | GD20660-PA | 1..191 | 1..191 | 996 | 97.4 | Plus |
Dsim\GD22063-PA | 155 | GD22063-PA | 1..57 | 1..57 | 152 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23794-PA | 191 | GJ23794-PA | 1..191 | 1..191 | 778 | 85.9 | Plus |
Dvir\GJ18129-PA | 155 | GJ18129-PA | 1..57 | 1..57 | 154 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11794-PA | 191 | GK11794-PA | 1..191 | 1..191 | 877 | 90.6 | Plus |
Dwil\GK15282-PA | 155 | GK15282-PA | 1..57 | 1..57 | 153 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24623-PA | 191 | GE24623-PA | 1..191 | 1..191 | 898 | 92.7 | Plus |
Translation from 186 to 761
> AT28833.hyp MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVG WTKAYRKAAGKELAIDPSFEFEKRRNVPMKYSRETWQKGLEAIKRVTEIK EKRTSHFVMERLRKGRQVEIQMDVKDVQRNMSLIRSPAAGLKQRRAQEAA EEAALMEEDLPEEKITYVDARELEKKLEEGMGVEDLEMLEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL24-like-PA | 191 | CG6764-PA | 1..191 | 1..191 | 994 | 100 | Plus |
RpL24-PC | 155 | CG9282-PC | 1..142 | 1..151 | 172 | 30.5 | Plus |
RpL24-PB | 155 | CG9282-PB | 1..142 | 1..151 | 172 | 30.5 | Plus |
RpL24-PA | 155 | CG9282-PA | 1..142 | 1..151 | 172 | 30.5 | Plus |