Clone AT29108 Report

Search the DGRC for AT29108

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:291
Well:8
Vector:pOTB7
Associated Gene/Transcriptdre4-RB
Protein status:AT29108.pep: gold
Sequenced Size:3598

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1828 2002-01-01 Sim4 clustering to Release 2
CG1828 2003-08-02 Blastp of sequenced clone
dre4 2008-04-29 Release 5.5 accounting
dre4 2008-08-15 Release 5.9 accounting
dre4 2008-12-18 5.12 accounting

Clone Sequence Records

AT29108.complete Sequence

3598 bp (3598 high quality bases) assembled on 2003-08-02

GenBank Submission: BT010116

> AT29108.complete
AGCGGTCTCACTCACGTCGAGCTGACGCTTATTCTGCTTCTTCTTCATCT
GGTCGCCGCGCAATTTTTTTATCCGGCGGAATTTGCAAATGCAATTTCTG
GCGTTTAGCGCATTTTAAGCGGAGTTAACGCATACACAGTAACAAATCCG
GCGGCAATATGTCGAGCTTTGTGCTGGACAAGGAGGCGTTCGTGCGCCGC
GTGAAACGCCTCTACACGGAATGGAGGGCTCCCAGCATCGGACACGATGA
CGCGCTCAGGAATCTGGACTGCATCATGAGCATCGTGGGCGTCGAAGAGG
ATGTCATGTACTCCAAGTCCATGGCCCTGCAGCTCTGGCTGCTGGGCTAC
GAGCTGACGGACACCATCTCAGTGTTTTGCTCGGATGCCGTGTATTTTCT
CACTAGCAAAAAGAAAATAGAATTCCTGAAGCAGACGCAGAACATCACCG
AAGAAGGTTTTCCGGAAATCAATCTGCTTGTTAGGGATCGGACGGACAAG
GACCAGGGCAACTTCGAGAAGCTCATCAAAGCCCTGCAAAACTCGAAGAA
GGGCAAGCGTTTGGGCGTCTTCGCCAAGGACGCCTATCCCGGGGAGTTCA
GCGAAGCATGGAAGAAATCCCTGACGGCGTCCAAGTTCGAGCATGTGGAC
ATTAGCACTATTATCGCCTACCTCATGTGTCCCAAGGATGAGTCGGAGAT
CAACAACATACGCAAGGCATCGCTAGTGTCAATGGACATTTTCAACAAGT
ATTTGAAAGATGAGATCATGGACATTATTGATTCGGATAGGAAAGTCAAA
CACAACAAGCTCTCAGATGGCTGCGAGGCTGCCATTGGCGAGAAGAAGTA
CACCAGTGGTCTGGATCCCAGACTCCTCGATATGGCCTACCCACCCATCA
TCCAATCGGGAGGAGCCTACAGCCTGAAGTTCTCCGCGGTGGCGGACAAA
AATCCCTTGCACTTCGGTGTGATTGTGTGCTCCTTGGGCGCCCGCTACAA
GTCGTATTGCTCAAATATATCGCGCACCTTTCTGGTGAATCCCACCGAGG
CCATGCAGGAGAACTACACATTTCTGGTAAGTGTGCAGGAGGAGATTCTC
AAGCTGCTGGTTCCGGGCACAAAGCTGTGCGACGTCTACGAAAAGACCCT
GGACTTCGTGAAGAAGGAGAAGCCGAGTATGGTGGACAATCTGCCCAAAA
GCTTTGGTTTCGCCATGGGCCTAGAGTTCCGGGAGAACTCCATTGTCATC
GGACCCAAATGCCAGGCGCTACTCAAGAAGAATATGGTCTTTAATTTGCA
CGTGGGCATCTCGAATCTGACCAATCCCGAAGCCACCGACAAAGAGGGCA
AGAACTACGCCCTCTTCATCGGAGACACTGTGCTAGTAGGCGAACAATCC
CCAGCCAGTGTGATGACTCCGTCCAAGAAGAAGATCAAGAACGTCGGCAT
CTTTATCAAGGACGACAGCGACGAGGAAGATGTGGACGACAAGAAGACCG
CTAAAGAAGATCAGGGCACCGAGATCCTGGGCCGCAGCAAGCGCAACGCG
GTGCTGGAGTCAAAGCTGCGAAACGAGATCAACACGGAGGAAAAGCGCAA
GGAGCACCAGCGCGAGCTGGCTCAGCAGCTGAACGAGCGCGCCAAGGATC
GGCTGGCCAGGCAGGGAAACTCGAAGGAGGTCGAGAAAGTGCGCAAGAAC
ACCGTCTCCTACAAGTCCATCAGCCAAATGCCGCGCGAGCCGGAAGTCAA
GGAGCTCAAGCTTTACGTGGATAAGAAGTACGAGACCGTCATCATGCCAG
TGTTCGGCATCCAGGTGCCGTTCCATATATCCACCATCAAGAACATCTCG
CAGTCGGTGGAGGGCGAGTACACGTACTTGCGTATCAACTTCTTTCATCC
CGGCGCCACAATGGGTCGCAACGAAGGCGGACTCTATCCTCAGCCAGAGG
CCACATTTGTCAAGGAAGTTACATACCGCAGCTCTAATGTTAAGGAACAC
GGGGAGGTGGGAGCTCCATCCGCAAATCTAAACAATGCTTTCCGGCTGAT
CAAGGAGGTGCAGAAGCGCTTCAAGACCCGCGAGGCTGAGGAGCGCGAAA
AGGAGGATCTTGTGAAGCAAGACACACTCATTCTGTCCCAGAACAAGGGT
AATCCCAAGCTGAAGGACCTATACATTCGGCCCAACATCGTGACCAAGCG
CATGACGGGCAGCCTGGAAGCGCACAGCAATGGATTCCGCTACATCTCCG
TGCGCGGCGACAAGGTGGACATCTTGTACAACAACATCAAAAGCGCGTTT
TTCCAGCCCTGCGATGGCGAGATGATCATTCTTCTGCATTTCCACCTGAA
GTACGCCATTATGTTTGGCAAAAAGAAGCACGTGGATGTACAGTTCTACA
CGGAAGTGGGAGAGATCACCACGGATCTGGGCAAGCACCAGCACATGCAC
GACCGCGACGACTTGGCTGCTGAGCAGGCAGAACGTGAGCTGCGGCACAA
GCTCAAGACTGCCTTCAAGAGCTTCTGCGAGAAGGTGGAAACCATGACCA
AGTCGGTAGTGGAGTTCGACACGCCGTTCCGTGAGTTGGGATTCCCTGGA
GCACCCTTCCGCAGCACGGTGACGCTGCAACCCACCTCGGGCTCCTTGGT
CAATCTGACGGAATGGCCACCATTTGTCATCACGCTGGACGATGTGGAGT
TGGTGCACTTCGAGCGCGTTCAGTTCCACTTGCGCAACTTCGATATGATA
TTTGTGTTCAAGGAGTACAACAAGAAGGTGGCCATGGTGAACGCCATTCC
TATGAACATGCTGGATCACGTGAAGGAGTGGCTCAACTCCTGCGACATCC
GCTATTCGGAGGGTGTTCAATCCTTGAACTGGCAAAAGATCATGAAGACC
ATCACCGACGATCCTGAGGGATTCTTTGAACAAGGCGGCTGGACATTCTT
GGACCCGGAATCGGGCAGCGAAGGCGAAAACGAAACCGCCGAGTCCGAAG
AGGACGAGGCCTACAATCCCACCGACGCTGAATCGGATGAGGAGTCGGAC
GAAGATTCCGAGTACTCAGAGGCATCAGAAGACAGCGAGGAAAGCGATGA
GGACCTTGGCTCTGATGAGGAATCTGGCAAGGATTGGTCCGATCTGGAGC
GCGAGGCTGCTGAGGAAGACCGCAACCACGATTATGCCGCAGATGACAAA
CCACGCAACGGCAAATTCGATTCGAAGAAGCACGGCAAGAGTTCAAAGCA
CAGCCCGTCGAAGTCGTCGAAGGACAAGTACAACAGCCGGGACAAGCATC
ATTCCTCCTCATCGTCCGGAAACAAGAGCAGCAGCAAGGACAAGGATCGC
AAGCGCTCGCGGGATGACAGTCGCGACAATGGGCACAAGTCGAAGAAGTC
GCGACATTAGGGAGCTGTTCCTGTCGCCAAGCCTGTGTGGCACTCCGTTC
GTAATCTAGCTCTCCTGTTACCATTGTCTATCTGTTAAAGGACCCGCCAC
CCCAATCCCCCGTCACTCATTTTTGTCACGCTTCAAAAGTTGTATTACAA
ATTAAATATAATACGATACATTAATATAAAAAAAAAAAAAAAAAAAAA

AT29108.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:25:15
Subject Length Description Subject Range Query Range Score Percent Strand
dre4-RB 3706 dre4-RB 64..3646 1..3583 17795 99.7 Plus
dre4-RA 3823 dre4-RA 64..3316 1..3253 16160 99.7 Plus
dre4-RA 3823 dre4-RA 3432..3763 3252..3583 1645 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:05:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1873603..1874781 1969..791 5880 99.9 Minus
chr3L 24539361 chr3L 1872679..1873545 2836..1970 4290 99.7 Minus
chr3L 24539361 chr3L 1871156..1871481 3577..3252 1630 100 Minus
chr3L 24539361 chr3L 1874849..1875149 791..491 1505 100 Minus
chr3L 24539361 chr3L 1875214..1875478 491..227 1325 100 Minus
chr3L 24539361 chr3L 1872362..1872624 3099..2837 1270 98.9 Minus
chr3L 24539361 chr3L 1875671..1875898 228..1 1140 100 Minus
chr3L 24539361 chr3L 1872144..1872298 3253..3099 775 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:01:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:05:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1874041..1875219 1969..791 5880 99.9 Minus
3L 28110227 3L 1873117..1873983 2836..1970 4290 99.7 Minus
3L 28110227 3L 1871588..1871919 3583..3252 1645 99.7 Minus
3L 28110227 3L 1875287..1875587 791..491 1505 100 Minus
3L 28110227 3L 1875652..1875916 491..227 1325 100 Minus
3L 28110227 3L 1872800..1873062 3099..2837 1270 98.9 Minus
3L 28110227 3L 1876109..1876336 228..1 1140 100 Minus
3L 28110227 3L 1872582..1872736 3253..3099 775 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1874041..1875219 1969..791 5880 99.9 Minus
3L 28103327 3L 1873117..1873983 2836..1970 4290 99.6 Minus
3L 28103327 3L 1871588..1871919 3583..3252 1645 99.6 Minus
3L 28103327 3L 1875287..1875587 791..491 1505 100 Minus
3L 28103327 3L 1875652..1875916 491..227 1325 100 Minus
3L 28103327 3L 1872800..1873062 3099..2837 1270 98.8 Minus
3L 28103327 3L 1876109..1876336 228..1 1140 100 Minus
3L 28103327 3L 1872582..1872736 3253..3099 775 100 Minus
Blast to na_te.dros performed on 2019-03-17 00:05:29 has no hits.

AT29108.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:06:26 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1871156..1871479 3254..3577 100 <- Minus
chr3L 1872144..1872297 3100..3253 100 <- Minus
chr3L 1872362..1872624 2837..3099 98 <- Minus
chr3L 1872679..1873545 1970..2836 99 <- Minus
chr3L 1873603..1874780 792..1969 99 <- Minus
chr3L 1874849..1875148 492..791 100 <- Minus
chr3L 1875214..1875477 228..491 100 <- Minus
chr3L 1875672..1875898 1..227 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:29:01 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3252 159..3410 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:11:05 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3252 159..3410 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:57:16 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3252 159..3410 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:42:04 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3252 159..3410 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:10:23 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3252 159..3410 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:02:30 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3577 1..3577 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:11:05 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3577 1..3577 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:16 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3553 25..3577 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:42:05 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3577 1..3577 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:23 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
dre4-RB 1..3553 25..3577 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:06:26 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1871594..1871917 3254..3577 100 <- Minus
3L 1872582..1872735 3100..3253 100 <- Minus
3L 1872800..1873062 2837..3099 98 <- Minus
3L 1873117..1873983 1970..2836 99 <- Minus
3L 1874041..1875218 792..1969 99 <- Minus
3L 1875287..1875586 492..791 100 <- Minus
3L 1875652..1875915 228..491 100 <- Minus
3L 1876110..1876336 1..227 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:06:26 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1871594..1871917 3254..3577 100 <- Minus
3L 1872582..1872735 3100..3253 100 <- Minus
3L 1872800..1873062 2837..3099 98 <- Minus
3L 1873117..1873983 1970..2836 99 <- Minus
3L 1874041..1875218 792..1969 99 <- Minus
3L 1875287..1875586 492..791 100 <- Minus
3L 1875652..1875915 228..491 100 <- Minus
3L 1876110..1876336 1..227 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:06:26 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1871594..1871917 3254..3577 100 <- Minus
3L 1872582..1872735 3100..3253 100 <- Minus
3L 1872800..1873062 2837..3099 98 <- Minus
3L 1873117..1873983 1970..2836 99 <- Minus
3L 1874041..1875218 792..1969 99 <- Minus
3L 1875287..1875586 492..791 100 <- Minus
3L 1875652..1875915 228..491 100 <- Minus
3L 1876110..1876336 1..227 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:16 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1873117..1873983 1970..2836 99 <- Minus
arm_3L 1871594..1871917 3254..3577 100 <- Minus
arm_3L 1872582..1872735 3100..3253 100 <- Minus
arm_3L 1872800..1873062 2837..3099 98 <- Minus
arm_3L 1874041..1875218 792..1969 99 <- Minus
arm_3L 1875287..1875586 492..791 100 <- Minus
arm_3L 1875652..1875915 228..491 100 <- Minus
arm_3L 1876110..1876336 1..227 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:19:42 Download gff for AT29108.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1876110..1876336 1..227 100   Minus
3L 1875652..1875915 228..491 100 <- Minus
3L 1871594..1871917 3254..3577 100 <- Minus
3L 1872582..1872735 3100..3253 100 <- Minus
3L 1872800..1873062 2837..3099 98 <- Minus
3L 1873117..1873983 1970..2836 99 <- Minus
3L 1874041..1875218 792..1969 99 <- Minus
3L 1875287..1875586 492..791 100 <- Minus

AT29108.pep Sequence

Translation from 158 to 3409

> AT29108.pep
MSSFVLDKEAFVRRVKRLYTEWRAPSIGHDDALRNLDCIMSIVGVEEDVM
YSKSMALQLWLLGYELTDTISVFCSDAVYFLTSKKKIEFLKQTQNITEEG
FPEINLLVRDRTDKDQGNFEKLIKALQNSKKGKRLGVFAKDAYPGEFSEA
WKKSLTASKFEHVDISTIIAYLMCPKDESEINNIRKASLVSMDIFNKYLK
DEIMDIIDSDRKVKHNKLSDGCEAAIGEKKYTSGLDPRLLDMAYPPIIQS
GGAYSLKFSAVADKNPLHFGVIVCSLGARYKSYCSNISRTFLVNPTEAMQ
ENYTFLVSVQEEILKLLVPGTKLCDVYEKTLDFVKKEKPSMVDNLPKSFG
FAMGLEFRENSIVIGPKCQALLKKNMVFNLHVGISNLTNPEATDKEGKNY
ALFIGDTVLVGEQSPASVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKE
DQGTEILGRSKRNAVLESKLRNEINTEEKRKEHQRELAQQLNERAKDRLA
RQGNSKEVEKVRKNTVSYKSISQMPREPEVKELKLYVDKKYETVIMPVFG
IQVPFHISTIKNISQSVEGEYTYLRINFFHPGATMGRNEGGLYPQPEATF
VKEVTYRSSNVKEHGEVGAPSANLNNAFRLIKEVQKRFKTREAEEREKED
LVKQDTLILSQNKGNPKLKDLYIRPNIVTKRMTGSLEAHSNGFRYISVRG
DKVDILYNNIKSAFFQPCDGEMIILLHFHLKYAIMFGKKKHVDVQFYTEV
GEITTDLGKHQHMHDRDDLAAEQAERELRHKLKTAFKSFCEKVETMTKSV
VEFDTPFRELGFPGAPFRSTVTLQPTSGSLVNLTEWPPFVITLDDVELVH
FERVQFHLRNFDMIFVFKEYNKKVAMVNAIPMNMLDHVKEWLNSCDIRYS
EGVQSLNWQKIMKTITDDPEGFFEQGGWTFLDPESGSEGENETAESEEDE
AYNPTDAESDEESDEDSEYSEASEDSEESDEDLGSDEESGKDWSDLEREA
AEEDRNHDYAADDKPRNGKFDSKKHGKSSKHSPSKSSKDKYNSRDKHHSS
SSSGNKSSSKDKDRKRSRDDSRDNGHKSKKSRH*

AT29108.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:37:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24952-PA 1122 GF24952-PA 2..1122 3..1083 5103 88.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:37:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14551-PA 1122 GG14551-PA 1..1122 1..1083 5721 95.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:37:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15037-PA 1121 GH15037-PA 1..1120 1..1082 4884 87.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
dre4-PB 1083 CG1828-PB 1..1083 1..1083 5622 100 Plus
dre4-PA 1122 CG1828-PA 1..1122 1..1083 5572 96.5 Plus
l(2)01289-PG 1191 CG9432-PG 777..941 932..1083 174 25.5 Plus
l(2)01289-PM 1193 CG9432-PM 777..941 932..1083 174 25.5 Plus
PNUTS-PA 628 CG33526-PA 215..386 913..1081 166 29.7 Plus
PNUTS-PB 628 CG33526-PB 215..386 913..1081 166 29.7 Plus
PNUTS-PE 1135 CG33526-PE 215..386 913..1081 166 29.7 Plus
PNUTS-PD 1135 CG33526-PD 215..386 913..1081 166 29.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:37:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16689-PA 1120 GI16689-PA 1..1119 1..1082 4975 87.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:37:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24818-PA 1126 GL24818-PA 1..1034 1..1032 4957 90.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:37:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23520-PA 1126 GA23520-PA 1..1034 1..1032 4964 90.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14159-PA 1122 GM14159-PA 1..1122 1..1083 5763 96.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13429-PA 904 GD13429-PA 1..902 1..902 4827 99.3 Plus
Dsim\GD13430-PA 210 GD13430-PA 5..120 917..1032 436 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12941-PA 1121 GJ12941-PA 1..1120 1..1082 4922 87.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10599-PA 1124 GK10599-PA 1..1124 1..1083 5005 86.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20905-PA 1122 GE20905-PA 1..1122 1..1083 5715 95.4 Plus
Dyak\GE22862-PA 907 GE22862-PA 14..521 20..568 2393 85.6 Plus
Dyak\GE22862-PA 907 GE22862-PA 521..907 649..1083 1816 83.7 Plus
Dyak\GE22858-PA 472 GE22858-PA 289..471 689..892 910 84.3 Plus
Dyak\GE22858-PA 472 GE22858-PA 110..290 220..401 886 92.3 Plus
Dyak\GE22858-PA 472 GE22858-PA 34..109 24..99 394 97.4 Plus

AT29108.hyp Sequence

Translation from 158 to 3409

> AT29108.hyp
MSSFVLDKEAFVRRVKRLYTEWRAPSIGHDDALRNLDCIMSIVGVEEDVM
YSKSMALQLWLLGYELTDTISVFCSDAVYFLTSKKKIEFLKQTQNITEEG
FPEINLLVRDRTDKDQGNFEKLIKALQNSKKGKRLGVFAKDAYPGEFSEA
WKKSLTASKFEHVDISTIIAYLMCPKDESEINNIRKASLVSMDIFNKYLK
DEIMDIIDSDRKVKHNKLSDGCEAAIGEKKYTSGLDPRLLDMAYPPIIQS
GGAYSLKFSAVADKNPLHFGVIVCSLGARYKSYCSNISRTFLVNPTEAMQ
ENYTFLVSVQEEILKLLVPGTKLCDVYEKTLDFVKKEKPSMVDNLPKSFG
FAMGLEFRENSIVIGPKCQALLKKNMVFNLHVGISNLTNPEATDKEGKNY
ALFIGDTVLVGEQSPASVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKE
DQGTEILGRSKRNAVLESKLRNEINTEEKRKEHQRELAQQLNERAKDRLA
RQGNSKEVEKVRKNTVSYKSISQMPREPEVKELKLYVDKKYETVIMPVFG
IQVPFHISTIKNISQSVEGEYTYLRINFFHPGATMGRNEGGLYPQPEATF
VKEVTYRSSNVKEHGEVGAPSANLNNAFRLIKEVQKRFKTREAEEREKED
LVKQDTLILSQNKGNPKLKDLYIRPNIVTKRMTGSLEAHSNGFRYISVRG
DKVDILYNNIKSAFFQPCDGEMIILLHFHLKYAIMFGKKKHVDVQFYTEV
GEITTDLGKHQHMHDRDDLAAEQAERELRHKLKTAFKSFCEKVETMTKSV
VEFDTPFRELGFPGAPFRSTVTLQPTSGSLVNLTEWPPFVITLDDVELVH
FERVQFHLRNFDMIFVFKEYNKKVAMVNAIPMNMLDHVKEWLNSCDIRYS
EGVQSLNWQKIMKTITDDPEGFFEQGGWTFLDPESGSEGENETAESEEDE
AYNPTDAESDEESDEDSEYSEASEDSEESDEDLGSDEESGKDWSDLEREA
AEEDRNHDYAADDKPRNGKFDSKKHGKSSKHSPSKSSKDKYNSRDKHHSS
SSSGNKSSSKDKDRKRSRDDSRDNGHKSKKSRH*

AT29108.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
dre4-PB 1083 CG1828-PB 1..1083 1..1083 5622 100 Plus
dre4-PA 1122 CG1828-PA 1..1122 1..1083 5572 96.5 Plus
l(2)01289-PG 1191 CG9432-PG 777..941 932..1083 174 25.5 Plus
l(2)01289-PM 1193 CG9432-PM 777..941 932..1083 174 25.5 Plus
PNUTS-PA 628 CG33526-PA 215..386 913..1081 166 29.7 Plus