Clone AT29763 Report

Search the DGRC for AT29763

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:297
Well:63
Vector:pOTB7
Associated Gene/TranscriptCG30156-RA
Protein status:AT29763.pep: gold
Sequenced Size:1445

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30156 2003-01-01 Sim4 clustering to Release 3
CG30156 2004-08-13 Blastp of sequenced clone
CG30156 2008-04-29 Release 5.5 accounting
CG30156 2008-08-15 Release 5.9 accounting
CG30156 2008-12-18 5.12 accounting

Clone Sequence Records

AT29763.complete Sequence

1445 bp (1445 high quality bases) assembled on 2004-08-13

GenBank Submission: BT016138

> AT29763.complete
GTTGACATACAAAATGTTGACTGGCGAAAGTCAATTTGTATTTAAGTTTG
CAGCTACATATACATATACAGTCAACTTAGTTCGAAACTATTTCGGCTAC
CTCTAATATACATACAAAGGCACTTTGTTAAATTCACCAACTCGGTGGAT
TGTCCCAGAACAACAAACCAAAATTTAAAATTTGCAAACGAACAGAGAAA
AACGAATCCTTTTTTGTCTTCTCACGCTGCTGGGAAGGAGAAGAAAGTAA
CCAAGAACTGGAGGACGACGACTTCACAATGGGAATCCTGCAGGCGAGGA
GGCATCACTGCGTCGACAAGGTGGTGAGTGACCTGTGCCTGGGACACTAC
GAGCACGCTCTGAGGCAGATCAACGAGGATCTGGAAGGTTTACAGAACCA
CGATGAGATCATGGCGCTGCTGGAGCTAAAGAATATCATTTTGAGACTGA
GGTTGAAGGGCGAGGCCCAGCGGACCATAGGCCCAACTCGCAAATCTGAC
GCCCTGCCCCACAAGTTCACACTCGAGATGCTGGACGTGGTGCAGAAGGT
CCTGCGGTGCCGCAATCACTACGAGGTGCTGCGCATCTCTCATCATGCCA
CCTACTCCGAGGTGAAGCGGGCCTACCACAAGCTGGCCCTGCGCCTCCAT
CCGGACAAGAACAAATCTCCTGGGGCTGAGCAGGCCTTCCGGCGGATCAG
CGAGGCGGCTGACTGCCTCACGGACTGCCAGAAAAGGATTGAGTACAACA
TAGCAACGGCAGTGGGCGACTGCCACGACCAGGATCCCTCGCAGTACAAG
GATTATCGCGGGGAAAGTGAATTCAATGAGGCAAATGGGAACGATCTGGG
AGCCGCTTTCAGAAGGCCTTATCGGGGGGCCAATCAGCGGATGCCCCAGA
GGCAGTCACTCTACCAAACACAGCAACTCGTCATCGGAGTGGTGGCTGCT
CTGGTTTTTCTCTTCGTCACCATGCACTTCATCGCAGGCGCTCCTGCTTA
CAGTTTTACGCTAACCAGAACCCATAGCGCTCGTCGGCTCAGTCGGACGA
ACCACATTGCCTACTACATGAATCCGACGACTCTGTCCAAGTACACAGAA
CAGCAGTTGGCCGAACTGGAAGTAGAAATCGAGGAGGTTTACATCTCGGA
CCTCAAACATAAGTGCAGGCAAGAGCGGAGTTGGAGGGATAATCTGTTTC
TCAGGGCGAGGCAGGGAAACAACGACCAGAAGTTGCTCCAGCATGTCAGC
CAGATGTCCACTCCCGCTTGCCAGGCGTTGCTCCAGCTGGGAAAGTCTGG
TCACAGTCGACTGTTGCTCGAGAACGAGTCTTTGAATCAGGACGTGCCAG
TCTGATACTCTGTACTTTTCTATTGATAGATGTAGGGATTAGTGCACGGT
GTAAATAAAGAGTAGTTTTAAAAATAAAAAAAAAAAAAAAAAAAA

AT29763.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:58:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG30156-RA 1516 CG30156-RA 88..1513 1..1426 7055 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:20:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2869369..2870386 1018..1 5045 99.7 Minus
chr2R 21145070 chr2R 2868846..2869085 1425..1186 1200 100 Minus
chr2R 21145070 chr2R 2869142..2869313 1186..1015 830 98.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:02:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:20:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6981969..6982986 1018..1 5045 99.7 Minus
2R 25286936 2R 6981445..6981685 1426..1186 1205 100 Minus
2R 25286936 2R 6981742..6981913 1186..1015 830 98.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 6983168..6984185 1018..1 5045 99.7 Minus
2R 25260384 2R 6982644..6982884 1426..1186 1205 100 Minus
2R 25260384 2R 6982941..6983112 1186..1015 830 98.8 Minus
Blast to na_te.dros performed on 2019-03-15 15:20:51 has no hits.

AT29763.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:21:36 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2868846..2869085 1186..1425 100 <- Minus
chr2R 2869143..2869309 1019..1185 98 <- Minus
chr2R 2869369..2870386 1..1018 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:29:52 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1077 279..1355 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:32:34 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1077 279..1355 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:25:04 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1077 279..1355 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:16:25 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1077 279..1355 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:03:14 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1077 279..1355 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:37:49 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1425 1..1425 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:32:34 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1425 1..1425 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:25:04 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1425 1..1425 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:16:26 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1425 1..1425 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:03:14 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
CG30156-RA 1..1425 1..1425 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:36 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6981743..6981909 1019..1185 98 <- Minus
2R 6981446..6981685 1186..1425 100 <- Minus
2R 6981969..6982986 1..1018 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:36 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6981743..6981909 1019..1185 98 <- Minus
2R 6981446..6981685 1186..1425 100 <- Minus
2R 6981969..6982986 1..1018 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:36 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6981743..6981909 1019..1185 98 <- Minus
2R 6981446..6981685 1186..1425 100 <- Minus
2R 6981969..6982986 1..1018 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:25:04 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2868951..2869190 1186..1425 100 <- Minus
arm_2R 2869248..2869414 1019..1185 98 <- Minus
arm_2R 2869474..2870491 1..1018 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:53:23 Download gff for AT29763.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6982645..6982884 1186..1425 100 <- Minus
2R 6982942..6983108 1019..1185 98 <- Minus
2R 6983168..6984185 1..1018 99   Minus

AT29763.pep Sequence

Translation from 278 to 1354

> AT29763.pep
MGILQARRHHCVDKVVSDLCLGHYEHALRQINEDLEGLQNHDEIMALLEL
KNIILRLRLKGEAQRTIGPTRKSDALPHKFTLEMLDVVQKVLRCRNHYEV
LRISHHATYSEVKRAYHKLALRLHPDKNKSPGAEQAFRRISEAADCLTDC
QKRIEYNIATAVGDCHDQDPSQYKDYRGESEFNEANGNDLGAAFRRPYRG
ANQRMPQRQSLYQTQQLVIGVVAALVFLFVTMHFIAGAPAYSFTLTRTHS
ARRLSRTNHIAYYMNPTTLSKYTEQQLAELEVEIEEVYISDLKHKCRQER
SWRDNLFLRARQGNNDQKLLQHVSQMSTPACQALLQLGKSGHSRLLLENE
SLNQDVPV*

AT29763.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11752-PA 371 GF11752-PA 2..359 6..351 1221 66.3 Plus
Dana\GF16232-PA 368 GF16232-PA 11..362 11..334 338 29.5 Plus
Dana\GF10450-PA 354 GF10450-PA 3..61 95..153 167 50.8 Plus
Dana\GF15175-PA 346 GF15175-PA 2..65 94..157 158 45.3 Plus
Dana\GF23490-PA 130 GF23490-PA 3..83 95..173 144 38.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10780-PA 370 GG10780-PA 17..369 1..354 1608 85.9 Plus
Dere\GG16832-PA 370 GG16832-PA 11..168 11..158 246 34.5 Plus
Dere\DnaJ-1-PA 351 GG14117-PA 3..61 95..153 170 52.5 Plus
Dere\GG24779-PA 350 GG24779-PA 3..65 95..157 155 46 Plus
Dere\GG13187-PA 127 GG13187-PA 3..81 95..173 151 38 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20391-PA 382 GH20391-PA 37..377 10..351 968 55.7 Plus
Dgri\GH22270-PA 368 GH22270-PA 72..170 64..158 235 45.5 Plus
Dgri\GH15011-PA 353 GH15011-PA 3..61 95..153 167 50.8 Plus
Dgri\GH11404-PA 346 GH11404-PA 3..65 95..157 163 49.2 Plus
Dgri\GH17711-PA 530 GH17711-PA 27..104 78..157 151 40 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG30156-PB 358 CG30156-PB 1..358 1..358 1866 100 Plus
CG30156-PA 358 CG30156-PA 1..358 1..358 1866 100 Plus
CG3061-PA 370 CG3061-PA 11..364 11..334 364 29.2 Plus
CG2887-PA 342 CG2887-PA 3..65 95..157 163 46 Plus
DnaJ-1-PA 334 CG10578-PA 3..61 95..153 158 49.2 Plus
DnaJ-1-PB 334 CG10578-PB 3..61 95..153 158 49.2 Plus
CG5001-PC 346 CG5001-PC 3..65 95..157 155 46 Plus
CG5001-PD 350 CG5001-PD 3..65 95..157 155 46 Plus
CG5001-PA 350 CG5001-PA 3..65 95..157 155 46 Plus
CG5001-PB 350 CG5001-PB 3..65 95..157 155 46 Plus
CG32641-PA 132 CG32641-PA 4..65 96..157 148 43.5 Plus
CG32640-PA 132 CG32640-PA 4..65 96..157 148 43.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20061-PA 339 GI20061-PA 2..338 27..355 903 54.7 Plus
Dmoj\GI21983-PA 359 GI21983-PA 70..353 68..334 342 33.8 Plus
Dmoj\GI13174-PA 352 GI13174-PA 3..65 95..157 168 49.2 Plus
Dmoj\GI14539-PA 347 GI14539-PA 3..65 95..157 162 47.6 Plus
Dmoj\GI15199-PA 325 GI15199-PA 3..65 95..157 155 47.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:08:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10957-PA 341 GL10957-PA 11..341 13..358 796 50.6 Plus
Dper\GL24233-PA 370 GL24233-PA 70..168 64..158 228 41.4 Plus
Dper\GL20776-PA 230 GL20776-PA 2..61 94..153 166 50 Plus
Dper\GL15626-PA 318 GL15626-PA 3..65 95..157 155 46 Plus
Dper\GL21375-PA 238 GL21375-PA 3..230 81..334 148 22.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15683-PA 385 GA15683-PA 46..385 13..358 848 52.9 Plus
Dpse\GA15899-PA 370 GA15899-PA 70..168 64..158 233 42.4 Plus
Dpse\GA10408-PA 353 GA10408-PA 2..61 94..153 165 50 Plus
Dpse\GA18584-PA 346 GA18584-PA 3..65 95..157 157 46 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20829-PA 358 GM20829-PA 1..358 1..358 1804 93.6 Plus
Dsec\GM24147-PA 370 GM24147-PA 11..168 11..158 230 34.6 Plus
Dsec\GM11309-PA 344 GM11309-PA 3..83 95..176 179 42.5 Plus
Dsec\DnaJ-1-PA 337 GM13903-PA 3..61 95..153 166 50.8 Plus
Dsec\GM16806-PA 350 GM16806-PA 3..65 95..157 158 46 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10282-PA 358 GD10282-PA 1..358 1..358 1800 93.3 Plus
Dsim\GD18942-PA 370 GD18942-PA 11..168 11..158 230 34.6 Plus
Dsim\DnaJ-1-PA 352 GD13179-PA 3..61 95..153 166 50.8 Plus
Dsim\GD16032-PA 300 GD16032-PA 3..65 95..157 164 46 Plus
Dsim\GD23083-PA 346 GD23083-PA 3..65 95..157 158 46 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14959-PA 667 GJ14959-PA 312..664 11..355 959 55.9 Plus
Dvir\GJ14343-PA 364 GJ14343-PA 68..358 63..334 308 30.5 Plus
Dvir\GJ11949-PA 351 GJ11949-PA 3..65 95..157 168 49.2 Plus
Dvir\GJ16971-PA 347 GJ16971-PA 3..65 95..157 159 46 Plus
Dvir\GJ14805-PA 325 GJ14805-PA 3..65 95..157 153 47.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21535-PA 346 GK21535-PA 18..343 11..348 882 55.2 Plus
Dwil\GK22686-PA 370 GK22686-PA 11..364 11..334 331 29 Plus
Dwil\GK16875-PA 356 GK16875-PA 3..61 95..153 169 52.5 Plus
Dwil\GK10421-PA 316 GK10421-PA 3..61 95..153 167 50.8 Plus
Dwil\GK15183-PA 346 GK15183-PA 3..65 95..157 157 46 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24291-PA 353 GE24291-PA 9..352 11..354 1509 82.6 Plus
Dyak\GE24215-PA 370 GE24215-PA 11..168 11..158 247 36.1 Plus
Dyak\DnaJ-1-PA 351 GE20542-PA 3..61 95..153 171 52.5 Plus
Dyak\GE17451-PA 350 GE17451-PA 3..65 95..157 155 46 Plus
Dyak\GE22992-PA 127 GE22992-PA 3..81 95..173 147 36.7 Plus

AT29763.hyp Sequence

Translation from 278 to 1354

> AT29763.hyp
MGILQARRHHCVDKVVSDLCLGHYEHALRQINEDLEGLQNHDEIMALLEL
KNIILRLRLKGEAQRTIGPTRKSDALPHKFTLEMLDVVQKVLRCRNHYEV
LRISHHATYSEVKRAYHKLALRLHPDKNKSPGAEQAFRRISEAADCLTDC
QKRIEYNIATAVGDCHDQDPSQYKDYRGESEFNEANGNDLGAAFRRPYRG
ANQRMPQRQSLYQTQQLVIGVVAALVFLFVTMHFIAGAPAYSFTLTRTHS
ARRLSRTNHIAYYMNPTTLSKYTEQQLAELEVEIEEVYISDLKHKCRQER
SWRDNLFLRARQGNNDQKLLQHVSQMSTPACQALLQLGKSGHSRLLLENE
SLNQDVPV*

AT29763.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:23:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG30156-PB 358 CG30156-PB 1..358 1..358 1866 100 Plus
CG30156-PA 358 CG30156-PA 1..358 1..358 1866 100 Plus
CG3061-PA 370 CG3061-PA 11..364 11..334 364 29.2 Plus
CG2887-PA 342 CG2887-PA 3..65 95..157 163 46 Plus
DnaJ-1-PA 334 CG10578-PA 3..61 95..153 158 49.2 Plus