AT30578.complete Sequence
762 bp (762 high quality bases) assembled on 2003-01-22
GenBank Submission: AY075288
> AT30578.complete
ATTCAAGATAAATTCTATGAGTGACTCACCTCTTTGGTTCACGTCGCTGC
TGCCCCATATCCCGTGATGTGCATTTGCATCACATCCAATGATGATGGGG
GAAGTCGAGTTTTACAACTGATACGAGCTTCACGATAAAAATAAATTGAG
CTATGCTCCAGAAAAACATCTAAAGGATTTTATCTATAACATGGCGACCG
TGACAGGACAGGGACCTAAGGCCTAAGGACATAGGGCCTAAGGACTACAA
TCACAATCAACACAAAATTTGTATTGGACTGGACTCGAAAGGCAGATGGA
AGACAAAATTCTGACATACCAGTTTACAAGGAACAATGCCCGTTGGACTG
CGAGGGACCATGGAGAGCCTATTGCAAATACACTTGCAAACATTGTAAGG
ACATCAACCAGCAGAAGGAGACCTGTGCACCGGCACCGCTTAACGCGTCA
AGTTAAGCCAGTAAGGGCACCTCTAACCACCAACAACAGCAGCTTGGGCA
GCAGGCACCGGCACCGTATGGAAAGGAAAAGGAAACCGACAGCGCTTCCG
AGAGCGCAATTTTTTTTTTCTCAATAGCACTGCGTTGCAAAAATTTTTTT
TAATGCACTACGATGCATATTTTTTTTGTCCTAACCATTAAAAAAAATTG
TAGAATCGAGTGGAAATATTTCTGCCCGATGAGCCGTATAGCCTGTAAAC
CTATACAAAAACAATAGGCAGGAACATATGTAAAAATTATAAGCAAAAAA
AAAAAAAAAAAA
AT30578.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:24:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nc_14314.a | 744 | nc_14314.a | 1..744 | 1..744 | 3720 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:38:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3L | 24539361 | chr3L | 24254726..24255155 | 315..744 | 2135 | 99.8 | Plus |
| chr3L | 24539361 | chr3L | 24254285..24254501 | 98..314 | 1085 | 100 | Plus |
| chr3RHet | 2517486 | chr3RHet | 2120457..2120666 | 103..312 | 885 | 94.8 | Plus |
| chr3L | 24539361 | chr3L | 24251999..24252097 | 1..99 | 495 | 100 | Plus |
| chrU | 10048995 | chrU | 6971531..6971629 | 99..1 | 465 | 98 | Minus |
| chr3LHet | 2555433 | chr3LHet | 834119..834217 | 99..1 | 450 | 97 | Minus |
| chr2RHet | 3288813 | chr2RHet | 159782..159880 | 1..99 | 450 | 97 | Plus |
| chr2RHet | 3288813 | chr2RHet | 170245..170343 | 1..99 | 450 | 97 | Plus |
| chr3RHet | 2517486 | chr3RHet | 2120973..2121116 | 481..627 | 445 | 88.4 | Plus |
| chrU | 10048995 | chrU | 3075095..3075193 | 99..1 | 435 | 96 | Minus |
| chr2L | 23010047 | chr2L | 22853831..22853929 | 1..99 | 435 | 96 | Plus |
| chr3L | 24539361 | chr3L | 23991577..23991675 | 99..1 | 420 | 94.9 | Minus |
| chr3LHet | 2555433 | chr3LHet | 171066..171161 | 96..1 | 420 | 95.8 | Minus |
| chr3LHet | 2555433 | chr3LHet | 2033209..2033307 | 1..99 | 420 | 94.9 | Plus |
| chr2RHet | 3288813 | chr2RHet | 529457..529554 | 1..98 | 415 | 94.9 | Plus |
| chrXHet | 204175 | chrXHet | 159212..159306 | 5..99 | 415 | 95.8 | Plus |
| chr2R | 21145070 | chr2R | 1293723..1293820 | 98..1 | 415 | 94.9 | Minus |
| chr2R | 21145070 | chr2R | 1464766..1464863 | 1..98 | 415 | 94.9 | Plus |
| chrU | 10048995 | chrU | 9002775..9002873 | 1..99 | 405 | 93.9 | Plus |
| chr3LHet | 2555433 | chr3LHet | 1824887..1824985 | 1..99 | 405 | 93.9 | Plus |
| chr2RHet | 3288813 | chr2RHet | 2165172..2165270 | 1..99 | 405 | 93.9 | Plus |
| chr2RHet | 3288813 | chr2RHet | 2172504..2172602 | 1..99 | 405 | 93.9 | Plus |
| chr3RHet | 2517486 | chr3RHet | 1833917..1834017 | 99..1 | 395 | 95 | Minus |
| chr2RHet | 3288813 | chr2RHet | 1909924..1910017 | 6..99 | 395 | 94.7 | Plus |
| chr3RHet | 2517486 | chr3RHet | 184615..184713 | 99..1 | 390 | 92.9 | Minus |
| chr3RHet | 2517486 | chr3RHet | 1044179..1044277 | 1..99 | 390 | 92.9 | Plus |
| chrU | 10048995 | chrU | 1014417..1014503 | 103..189 | 390 | 96.6 | Plus |
| chrU | 10048995 | chrU | 3726639..3726725 | 189..103 | 390 | 96.6 | Minus |
| chr3RHet | 2517486 | chr3RHet | 1827094..1827194 | 99..1 | 380 | 94.1 | Minus |
| chrX | 22417052 | chrX | 21657600..21657686 | 189..103 | 375 | 95.4 | Minus |
| chr2L | 23010047 | chr2L | 22602400..22602497 | 1..99 | 370 | 93.9 | Plus |
| chrU | 10048995 | chrU | 2566642..2566730 | 103..191 | 355 | 93.3 | Plus |
| chr3RHet | 2517486 | chr3RHet | 2120781..2120961 | 315..493 | 350 | 81.5 | Plus |
| chr2RHet | 3288813 | chr2RHet | 2082894..2082992 | 99..1 | 345 | 89.9 | Minus |
| chr2RHet | 3288813 | chr2RHet | 2153010..2153108 | 1..99 | 345 | 89.9 | Plus |
| chr3RHet | 2517486 | chr3RHet | 1158203..1158291 | 191..103 | 340 | 92.1 | Minus |
| chrU | 10048995 | chrU | 518420..518508 | 103..191 | 340 | 92.1 | Plus |
| chrU | 10048995 | chrU | 1171028..1171121 | 1..99 | 340 | 91.9 | Plus |
| chrU | 10048995 | chrU | 1382135..1382228 | 99..1 | 340 | 91.9 | Minus |
| chr3RHet | 2517486 | chr3RHet | 2125129..2125204 | 107..182 | 335 | 96.1 | Plus |
| chr2RHet | 3288813 | chr2RHet | 1550780..1550873 | 736..643 | 335 | 90.4 | Minus |
| chr3L | 24539361 | chr3L | 24326959..24327036 | 22..99 | 330 | 94.9 | Plus |
| chrU | 10048995 | chrU | 1254809..1254902 | 1..99 | 325 | 90.9 | Plus |
| chr3LHet | 2555433 | chr3LHet | 192888..192956 | 96..28 | 315 | 97.1 | Minus |
| chrU | 10048995 | chrU | 316066..316139 | 26..99 | 310 | 94.6 | Plus |
| chrU | 10048995 | chrU | 321730..321803 | 26..99 | 310 | 94.6 | Plus |
| chrU | 10048995 | chrU | 8460046..8460203 | 471..315 | 300 | 81.4 | Minus |
| chr3LHet | 2555433 | chr3LHet | 1076609..1076703 | 1..99 | 265 | 86.9 | Plus |
| chr2R | 21145070 | chr2R | 927241..927329 | 191..103 | 265 | 86.5 | Minus |
| chrU | 10048995 | chrU | 2436089..2436140 | 52..1 | 230 | 96.2 | Minus |
| chrU | 10048995 | chrU | 6080145..6080205 | 39..99 | 230 | 91.8 | Plus |
| chr3L | 24539361 | chr3L | 24269033..24269085 | 139..191 | 220 | 94.3 | Plus |
| chr2L | 23010047 | chr2L | 22486336..22486387 | 47..98 | 215 | 94.2 | Plus |
| chr2L | 23010047 | chr2L | 22489456..22489507 | 47..98 | 215 | 94.2 | Plus |
| chrU | 10048995 | chrU | 8459881..8459930 | 734..685 | 205 | 94 | Minus |
| chr3L | 24539361 | chr3L | 24177474..24177516 | 1..43 | 200 | 97.7 | Plus |
| chr3RHet | 2517486 | chr3RHet | 2121118..2121175 | 687..744 | 200 | 89.7 | Plus |
| chr3RHet | 2517486 | chr3RHet | 532243..532329 | 624..534 | 190 | 85.7 | Minus |
| chr2L | 23010047 | chr2L | 22971248..22971291 | 99..56 | 190 | 95.5 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:03:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:38:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 24265818..24266253 | 315..750 | 2180 | 100 | Plus |
| 3L | 28110227 | 3L | 24265377..24265593 | 98..314 | 1085 | 100 | Plus |
| 3R | 32079331 | 3R | 3360893..3361102 | 312..103 | 885 | 94.8 | Minus |
| 3L | 28110227 | 3L | 24263091..24263189 | 1..99 | 495 | 100 | Plus |
| U | 3151297 | U | 474813..474911 | 1..99 | 465 | 98 | Plus |
| U | 3151297 | U | 2712119..2712217 | 99..1 | 465 | 98 | Minus |
| Y | 3667352 | Y | 2752350..2752448 | 99..1 | 465 | 98 | Minus |
| 3L | 28110227 | 3L | 25348642..25348740 | 99..1 | 450 | 97 | Minus |
| 2R | 25286936 | 2R | 1033036..1033134 | 1..99 | 450 | 97 | Plus |
| 2R | 25286936 | 2R | 1043499..1043597 | 1..99 | 450 | 97 | Plus |
| 3R | 32079331 | 3R | 3360443..3360586 | 627..481 | 445 | 88.4 | Minus |
| 3R | 32079331 | 3R | 640324..640422 | 1..99 | 435 | 96 | Plus |
| 2L | 23513712 | 2L | 22962583..22962681 | 1..99 | 435 | 96 | Plus |
| 3L | 28110227 | 3L | 24002670..24002768 | 99..1 | 420 | 94.9 | Minus |
| 3L | 28110227 | 3L | 24687735..24687830 | 96..1 | 420 | 95.8 | Minus |
| 3L | 28110227 | 3L | 26750918..26751016 | 1..99 | 420 | 94.9 | Plus |
| 2R | 25286936 | 2R | 5406316..5406413 | 98..1 | 415 | 94.9 | Minus |
| 2R | 25286936 | 2R | 5577409..5577506 | 1..98 | 415 | 94.9 | Plus |
| 2R | 25286936 | 2R | 1402759..1402856 | 1..98 | 415 | 94.9 | Plus |
| X | 23542271 | X | 23180334..23180428 | 5..99 | 415 | 95.8 | Plus |
| 3L | 28110227 | 3L | 26546346..26546444 | 1..99 | 405 | 93.9 | Plus |
| 2R | 25286936 | 2R | 3371515..3371613 | 1..99 | 405 | 93.9 | Plus |
| 2R | 25286936 | 2R | 3378873..3378971 | 1..99 | 405 | 93.9 | Plus |
| 3R | 32079331 | 3R | 3716039..3716139 | 1..99 | 395 | 95 | Plus |
| 2R | 25286936 | 2R | 3126785..3126878 | 6..99 | 395 | 94.7 | Plus |
| 3R | 32079331 | 3R | 1249671..1249769 | 1..99 | 390 | 92.9 | Plus |
| 3R | 32079331 | 3R | 2334541..2334639 | 1..99 | 390 | 92.9 | Plus |
| X | 23542271 | X | 21935084..21935170 | 189..103 | 390 | 96.6 | Minus |
| 3R | 32079331 | 3R | 3731680..3731780 | 1..99 | 380 | 94.1 | Plus |
| X | 23542271 | X | 21792442..21792528 | 189..103 | 375 | 95.4 | Minus |
| 2L | 23513712 | 2L | 22711177..22711274 | 1..99 | 370 | 93.9 | Plus |
| Y | 3667352 | Y | 1117211..1117299 | 103..191 | 355 | 93.3 | Plus |
| 3R | 32079331 | 3R | 3360598..3360778 | 493..315 | 350 | 81.5 | Minus |
| 2R | 25286936 | 2R | 3300640..3300738 | 99..1 | 345 | 89.9 | Minus |
| 2R | 25286936 | 2R | 3322105..3322203 | 99..1 | 345 | 89.9 | Minus |
| 2R | 25286936 | 2R | 3359358..3359456 | 1..99 | 345 | 89.9 | Plus |
| 3R | 32079331 | 3R | 1982370..1982458 | 103..191 | 340 | 92.1 | Plus |
| 3R | 32079331 | 3R | 2581499..2581587 | 191..103 | 340 | 92.1 | Minus |
| 2R | 25286936 | 2R | 1582708..1582801 | 1..99 | 340 | 91.9 | Plus |
| 2R | 25286936 | 2R | 1791561..1791654 | 99..1 | 340 | 91.9 | Minus |
| 3R | 32079331 | 3R | 3356358..3356433 | 182..107 | 335 | 96.1 | Minus |
| 2R | 25286936 | 2R | 2775703..2775796 | 736..643 | 335 | 90.4 | Minus |
| 3L | 28110227 | 3L | 24338059..24338136 | 22..99 | 330 | 94.9 | Plus |
| 2R | 25286936 | 2R | 1661783..1661876 | 1..99 | 325 | 90.9 | Plus |
| 3L | 28110227 | 3L | 24709558..24709626 | 96..28 | 315 | 97.1 | Minus |
| U | 3151297 | U | 1329240..1329397 | 471..315 | 315 | 82 | Minus |
| Y | 3667352 | Y | 377846..378003 | 315..471 | 315 | 82 | Plus |
| 2R | 25286936 | 2R | 738915..738988 | 26..99 | 310 | 94.6 | Plus |
| 2R | 25286936 | 2R | 744579..744652 | 26..99 | 310 | 94.6 | Plus |
| 3L | 28110227 | 3L | 25693943..25694037 | 1..99 | 265 | 86.9 | Plus |
| 2R | 25286936 | 2R | 5039723..5039811 | 191..103 | 265 | 86.5 | Minus |
| U | 3151297 | U | 1888178..1888238 | 39..99 | 230 | 91.8 | Plus |
| Y | 3667352 | Y | 837371..837431 | 99..39 | 230 | 91.8 | Minus |
| 2R | 25286936 | 2R | 380833..380884 | 1..52 | 230 | 96.2 | Plus |
| 2R | 25286936 | 2R | 385294..385345 | 1..52 | 230 | 96.2 | Plus |
| 3L | 28110227 | 3L | 24280134..24280186 | 139..191 | 220 | 94.3 | Plus |
| 3R | 32079331 | 3R | 3360381..3360441 | 747..687 | 215 | 90.2 | Minus |
| 2L | 23513712 | 2L | 22595116..22595167 | 47..98 | 215 | 94.2 | Plus |
| 2L | 23513712 | 2L | 22598236..22598287 | 47..98 | 215 | 94.2 | Plus |
| U | 3151297 | U | 1329076..1329125 | 734..685 | 205 | 94 | Minus |
| Y | 3667352 | Y | 378118..378167 | 685..734 | 205 | 94 | Plus |
| 3L | 28110227 | 3L | 24188567..24188609 | 1..43 | 200 | 97.7 | Plus |
| 3R | 32079331 | 3R | 973251..973337 | 534..624 | 190 | 85.7 | Plus |
| 2L | 23513712 | 2L | 23080012..23080055 | 99..56 | 190 | 95.5 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:02:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28103327 | 3L | 24258918..24259353 | 315..750 | 2180 | 100 | Plus |
| 3L | 28103327 | 3L | 24258477..24258693 | 98..314 | 1085 | 100 | Plus |
| 3R | 31820162 | 3R | 3022331..3022540 | 312..103 | 885 | 94.7 | Minus |
| 3L | 28103327 | 3L | 24256191..24256289 | 1..99 | 495 | 100 | Plus |
| Y | 3410481 | Y | 2680551..2680649 | 99..1 | 465 | 97.9 | Minus |
| Unmapped_scaffold_35 | 57785 | Unmapped_scaffold_35 | 5938..6036 | 1..99 | 465 | 97.9 | Plus |
| 3R | 31820162 | 3R | 3021881..3022024 | 627..481 | 455 | 88.4 | Minus |
| 3L | 28103327 | 3L | 25341742..25341840 | 99..1 | 450 | 96.9 | Minus |
| 2R | 25260384 | 2R | 1043499..1043597 | 1..99 | 450 | 96.9 | Plus |
| 2R | 25260384 | 2R | 1033036..1033134 | 1..99 | 450 | 96.9 | Plus |
| 3R | 31820162 | 3R | 437902..438000 | 1..99 | 435 | 95.9 | Plus |
| 2L | 23513712 | 2L | 22962583..22962681 | 1..99 | 435 | 95.9 | Plus |
| Unmapped_scaffold_39 | 40272 | Unmapped_scaffold_39 | 18330..18428 | 99..1 | 435 | 95.9 | Minus |
| 3L | 28103327 | 3L | 26744018..26744116 | 1..99 | 420 | 94.9 | Plus |
| 3L | 28103327 | 3L | 24680835..24680930 | 96..1 | 420 | 95.8 | Minus |
| 3L | 28103327 | 3L | 23995770..23995868 | 99..1 | 420 | 94.9 | Minus |
| 2R | 25260384 | 2R | 1402759..1402856 | 1..98 | 415 | 94.8 | Plus |
| 2R | 25260384 | 2R | 5578608..5578705 | 1..98 | 415 | 94.8 | Plus |
| 2R | 25260384 | 2R | 5407515..5407612 | 98..1 | 415 | 94.8 | Minus |
| X | 23527363 | X | 23165426..23165520 | 5..99 | 415 | 95.7 | Plus |
| 3L | 28103327 | 3L | 26539446..26539544 | 1..99 | 405 | 93.9 | Plus |
| 2R | 25260384 | 2R | 3378873..3378971 | 1..99 | 405 | 93.9 | Plus |
| 2R | 25260384 | 2R | 3371515..3371613 | 1..99 | 405 | 93.9 | Plus |
| 3R | 31820162 | 3R | 3377477..3377577 | 1..99 | 405 | 95 | Plus |
| 2R | 25260384 | 2R | 3126785..3126878 | 6..99 | 395 | 94.6 | Plus |
| 3R | 31820162 | 3R | 2132119..2132217 | 1..99 | 390 | 92.9 | Plus |
| 3R | 31820162 | 3R | 1047249..1047347 | 1..99 | 390 | 92.9 | Plus |
| 3R | 31820162 | 3R | 3393118..3393218 | 1..99 | 390 | 94 | Plus |
| X | 23527363 | X | 21920176..21920262 | 189..103 | 390 | 96.5 | Minus |
| 2L | 23513712 | 2L | 22711177..22711274 | 1..99 | 380 | 93.9 | Plus |
| X | 23527363 | X | 21777534..21777620 | 189..103 | 375 | 95.4 | Minus |
| Y | 3410481 | Y | 849136..849224 | 103..191 | 355 | 93.2 | Plus |
| 2R | 25260384 | 2R | 3359358..3359456 | 1..99 | 345 | 89.8 | Plus |
| 2R | 25260384 | 2R | 3322105..3322203 | 99..1 | 345 | 89.8 | Minus |
| 2R | 25260384 | 2R | 3300640..3300738 | 99..1 | 345 | 89.8 | Minus |
| 3R | 31820162 | 3R | 1779948..1780036 | 103..191 | 340 | 92.1 | Plus |
| 3R | 31820162 | 3R | 2379077..2379165 | 191..103 | 340 | 92.1 | Minus |
| 2R | 25260384 | 2R | 1582732..1582801 | 30..99 | 335 | 98.5 | Plus |
| 2R | 25260384 | 2R | 1791561..1791630 | 99..30 | 335 | 98.5 | Minus |
| 2R | 25260384 | 2R | 2775703..2775796 | 736..643 | 335 | 90.4 | Minus |
| 3R | 31820162 | 3R | 3017796..3017871 | 182..107 | 335 | 96 | Minus |
| 3L | 28103327 | 3L | 24331159..24331236 | 22..99 | 330 | 94.8 | Plus |
| 2R | 25260384 | 2R | 1661807..1661876 | 30..99 | 320 | 97.1 | Plus |
| 3L | 28103327 | 3L | 24702658..24702726 | 96..28 | 315 | 97.1 | Minus |
| 2R | 25260384 | 2R | 744579..744652 | 26..99 | 310 | 94.5 | Plus |
| 2R | 25260384 | 2R | 738915..738988 | 26..99 | 310 | 94.5 | Plus |
| 3L | 28103327 | 3L | 25687043..25687137 | 1..99 | 275 | 86.8 | Plus |
| 2R | 25260384 | 2R | 5040922..5041010 | 191..103 | 265 | 86.5 | Minus |
| Y | 3410481 | Y | 355660..355707 | 315..362 | 240 | 100 | Plus |
| 2R | 25260384 | 2R | 385294..385345 | 1..52 | 230 | 96.1 | Plus |
| 2R | 25260384 | 2R | 380833..380884 | 1..52 | 230 | 96.1 | Plus |
| 3R | 31820162 | 3R | 3022036..3022102 | 493..427 | 230 | 89.5 | Minus |
| Y | 3410481 | Y | 1112518..1112578 | 99..39 | 230 | 91.8 | Minus |
| 3L | 28103327 | 3L | 24273234..24273286 | 139..191 | 220 | 94.3 | Plus |
| 3R | 31820162 | 3R | 3021819..3021879 | 747..687 | 215 | 90.1 | Minus |
| 2L | 23513712 | 2L | 22598236..22598287 | 47..98 | 215 | 94.2 | Plus |
| 2L | 23513712 | 2L | 22595116..22595167 | 47..98 | 215 | 94.2 | Plus |
| Y | 3410481 | Y | 355932..355981 | 685..734 | 205 | 94 | Plus |
| 3L | 28103327 | 3L | 24181667..24181709 | 1..43 | 200 | 97.6 | Plus |
| 3R | 31820162 | 3R | 3022111..3022168 | 428..371 | 200 | 89.6 | Minus |
| 2L | 23513712 | 2L | 23080012..23080055 | 99..56 | 190 | 95.4 | Minus |
| 3R | 31820162 | 3R | 3022169..3022216 | 362..315 | 180 | 91.6 | Minus |
| Y | 3410481 | Y | 355773..355817 | 427..471 | 180 | 93.3 | Plus |
| 3L | 28103327 | 3L | 24181710..24181747 | 62..99 | 175 | 97.3 | Plus |
| Y | 3410481 | Y | 355708..355764 | 372..428 | 165 | 85.9 | Plus |
| 2R | 25260384 | 2R | 385344..385378 | 65..99 | 160 | 97.1 | Plus |
| 2R | 25260384 | 2R | 380883..380917 | 65..99 | 160 | 97.1 | Plus |
Blast to na_te.dros performed 2019-03-16 07:38:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 799..1159 | 315..642 | 1296 | 87.3 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 364..618 | 103..352 | 1002 | 89.4 | Plus |
| baggins | 5453 | baggins BAGGINS 5453bp | 2161..2262 | 102..1 | 483 | 97.1 | Minus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 4340..4428 | 103..191 | 400 | 94.4 | Plus |
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 824..1212 | 315..729 | 290 | 59 | Plus |
| Dsil\Loa | 7779 | Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). | 4523..4613 | 92..2 | 230 | 72.5 | Minus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1161..1204 | 701..744 | 184 | 90.9 | Plus |
| Dsub\bilbo | 5540 | Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). | 2229..2319 | 92..2 | 149 | 62.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2335..2403 | 476..543 | 125 | 70 | Plus |
| Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 515..586 | 140..210 | 123 | 65.3 | Plus |
| Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 417..451 | 178..212 | 121 | 82.9 | Plus |
| Tabor | 7345 | Tabor TABOR 7345bp | 476..522 | 162..207 | 115 | 74.5 | Plus |
| Stalker | 7256 | Stalker STALKER 7256bp | 382..420 | 166..204 | 114 | 76.9 | Plus |
| blood | 7410 | blood BLOOD 7410bp | 386..440 | 179..229 | 112 | 72.7 | Plus |
| 412 | 7567 | 412 412 7567bp | 499..529 | 175..206 | 112 | 87.5 | Plus |
AT30578.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:38:49 Download gff for
AT30578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3L | 24251999..24252096 | 1..98 | 100 | -> | Plus |
| chr3L | 24254286..24254501 | 99..314 | 100 | -> | Plus |
| chr3L | 24254726..24255155 | 315..744 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 17:46:12 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 17:46:12 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:38:49 Download gff for
AT30578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 24263091..24263188 | 1..98 | 100 | -> | Plus |
| 3L | 24265378..24265593 | 99..314 | 100 | -> | Plus |
| 3L | 24265818..24266247 | 315..744 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:38:49 Download gff for
AT30578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 24263091..24263188 | 1..98 | 100 | -> | Plus |
| 3L | 24265378..24265593 | 99..314 | 100 | -> | Plus |
| 3L | 24265818..24266247 | 315..744 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:38:49 Download gff for
AT30578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 24263091..24263188 | 1..98 | 100 | -> | Plus |
| 3L | 24265378..24265593 | 99..314 | 100 | -> | Plus |
| 3L | 24265818..24266247 | 315..744 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:11 Download gff for
AT30578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 24256191..24256288 | 1..98 | 100 | -> | Plus |
| arm_3L | 24258478..24258693 | 99..314 | 100 | -> | Plus |
| arm_3L | 24258918..24259347 | 315..744 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:11 Download gff for
AT30578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 24256191..24256288 | 1..98 | 100 | -> | Plus |
| arm_3L | 24258478..24258693 | 99..314 | 100 | -> | Plus |
| arm_3L | 24258918..24259347 | 315..744 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:11 Download gff for
AT30578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 24256191..24256288 | 1..98 | 100 | -> | Plus |
| arm_3L | 24258478..24258693 | 99..314 | 100 | -> | Plus |
| arm_3L | 24258918..24259347 | 315..744 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:17:15 Download gff for
AT30578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 24258478..24258693 | 99..314 | 100 | -> | Plus |
| 3L | 24258918..24259347 | 315..744 | 100 | | Plus |
| 3L | 24256191..24256288 | 1..98 | 100 | -> | Plus |
AT30578.pep Sequence
Translation from 295 to 576
> AT30578.pep
MEDKILTYQFTRNNARWTARDHGEPIANTLANIVRTSTSRRRPVHRHRLT
RQVKPVRAPLTTNNSSLGSRHRHRMERKRKPTALPRAQFFFSQ*
Sequence AT30578.pep has no blast hits.
AT30578.hyp Sequence
Translation from 295 to 576
> AT30578.hyp
MEDKILTYQFTRNNARWTARDHGEPIANTLANIVRTSTSRRRPVHRHRLT
RQVKPVRAPLTTNNSSLGSRHRHRMERKRKPTALPRAQFFFSQ*
Sequence AT30578.hyp has no blast hits.
