Clone AT30637 Report

Search the DGRC for AT30637

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:306
Well:37
Vector:pOTB7
Associated Gene/TranscriptCG17098-RA
Protein status:AT30637.pep: gold
Preliminary Size:1959
Sequenced Size:2416

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17098 2002-01-01 Sim4 clustering to Release 2
CG17098 2003-01-01 Sim4 clustering to Release 3
CG17098 2003-08-11 Blastp of sequenced clone
CG17098 2008-04-29 Release 5.5 accounting
CG17098 2008-08-15 Release 5.9 accounting
CG17098 2008-12-18 5.12 accounting

Clone Sequence Records

AT30637.complete Sequence

2416 bp (2416 high quality bases) assembled on 2003-08-11

GenBank Submission: BT010313

> AT30637.complete
TAAGGGAGCAACGCAGTCGGACCAGATGTGCTAACTAAGAAACCAGGTCC
ACAACCAATCCCAGACAAGTCCCCAAAAAGGAGGCATCAGCCAGTGCGTA
AGCTATCCACAATACAAAAGTTGCCACATCGCAGGACATGTTGTCCCACG
CCTTCAACATGCATCCGCAGAGGCGTGTGCCCGTCATCCATGAGCAGATC
GCAAAGCAGTGCGCCCTGAACATTGTGCGCGTGGCCTCCGCCATGCCGCA
ACCGCAGCCCCGCTGCCCATCCGGTCATGTGGTCGTGCTCGTGGAGCTGC
GCCGGACGGACGAGCAGACCGTGCACCGCTACCAGGTGAATGTGCCGCCA
ACGGGCTGGACCAACGAAGATTTGGAGGAGGAGGAAAAGCGATTCCAGCA
ATTGGTGCTCCCCGGTACACTGGACAGTATGGGCCTTAAGCTGCCTCTGC
CAGAGCGTCCTCCGTGTCCAATGCATGGGCGTTCCATCATGGAGATGGGC
TGGTCACCGAACTCCAACATGGGTCCGCCTCCTATGCTGATGATTCAGTC
TTCGGTACACATCACCAACGGGCAGGATGGCGCCACTGACTTCGCCACCT
TCAGAGAGCCCGTTGTGACTAGTGAATCACCGGATAATTTGAGAGCGCAC
TTTATGGCCAGTCTATATCAGCAGCAACCAAGTCCGCTGAGCTACTCGGA
CATCTGGGTATCAGATAGTCCATCGACGGGCTTGCCCAGAAGTGAAGCCC
TCTCCACGACCCATTTTCCGCAGTTTTATCTGGGCGAGAACGCCGAGTCT
ATGGTCGCTAATAAGATACGACCTATCAATGGTTATCCTATCAATGGTTA
TCCTATCAGTGGTTATCCGACAGTTCCGAGACCAGCTGTGAAAAAGCCTC
GTCACGTCGCCGAACTTTGCTTGGACAGCAATGGAGAGTATGTGCTCAAC
AAGCAGCTGCATCAACCGTTGATTAGCCGTCAACCCGATCCGATCATTCC
CAGTGTCTCGAGCAGGGATCCACACTACTTCATACAAAATCAAAGCCACC
AGTTGGAGTCCGCCATTAAAGGACTCAATGGCTACACGAACGTCGCCCAA
GAGTCTGAGAAGCCAAAAAATGGTTACAAATATCAGCCCGCGGCCTTTGC
AGATCAACGGATTGTCCTGCAACCAAAGCTGGGACAGGGACAGGGACAGG
CGCAGGGAGCAGTACCCGGATTTATACCCAATCACCTGCAGAGTCGTGTG
GCCATGGTCGAGCCTCGCATACGCCAGGAATCACTCATAAAACCACAAAA
TCCAGATTTGGCGTTGCCGTCGGAGGCACATCCACCGGTTCCCCAGGACC
TGCAGTCGCTCTTCCGCTGGAACTACTGTGCATTGTGTAACATGGTCATT
CGGTCGACACAGAGTGCCATTGATCACTACTCGTCGCGTGCCCATGAGCG
CAGGATTAGCTCGTGGCTGGTGCGTAAGTGCTACGCCAACCTTACTGGAC
GGGATGCGGACGCCTTGGGCGGGGCCATCAGCCAATCGGAATTCTACTGC
AAGTTGTGCGACCTGAAGCTGACCTCGTTGTCGCACGCACAGCAACACTT
CCTTGGGCGGCGTCACCGAATCGCGGCGCGCCACAGGATCAGACCATTCA
GTGATGGCTTCTACGATCGGGAGGGCAATTGGGTGCGCACGGACATCAAG
TACCCCATGTGCGAGCTGTGCGACGTGATCATCACCTCGGAGTCGCAAAT
GGCCATGCACCTGGCGGGTGCACGCCACCGTAGACGGGTCCAAATTGCCT
ATGCTGGTGAGTCCGCCGGGGGCATGGAAATGGGCATTGGTCTGGTCCCG
TTCGATGGCTCGCACATGTACCGGATACGCGGCAACGGATCGCTAGCCCC
AATAAGGCCCTTGGGCTCACAGCTCCTCCAAGGCTCCGCTTATCCGCTAT
CCCTGACCGATCCGAGTGCCGTCTTCTACTGCGATGCCTGCAACATTACG
CTCAACCATCTGAAGTCGGTGAATCAGCATGAGCAGGGACGCATGCACCG
CCGGAATATGCACAGGTTGCCCGCCCAAGCGGTCTTCTTCGAGTGATCTT
GCGATTGGCGAAGTGAATGGCTGGGAGATATCCGATGAAAAGTAAAGTCA
ACCCGCAACCGTAATACCAGTCAACGAGGAAAGTGAGGAAGGTGCCGGGA
GGAGGTTTTAAAGTACGTGATCTTTGGAAAATATTTCAAAAATAAACAGC
ATGATGTCTGGAGTTCCCAGTGGCCAAACCAACGTCCTGCTGCGCTGTGT
GTTATTTGCAATTTATTTTTGATCTAACTACTTTTTTTTATATGTTTTTT
AGTAGTATAATAAATAAACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA

AT30637.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:32:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG17098.a 2819 CG17098.a 413..2790 1..2378 11890 100 Plus
CG17098-RA 2778 CG17098-RA 349..2726 1..2378 11890 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:42:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10650774..10652078 1..1305 6525 100 Plus
chr2L 23010047 chr2L 10652227..10653295 1304..2372 5345 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:03:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10651978..10653282 1..1305 6525 100 Plus
2L 23513712 2L 10653431..10654505 1304..2378 5375 100 Plus
2L 23513712 2L 11317616..11317671 2357..2412 190 89.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:01:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10651978..10653282 1..1305 6525 100 Plus
2L 23513712 2L 10653431..10654505 1304..2378 5375 100 Plus
2L 23513712 2L 11317616..11317671 2357..2412 190 89.2 Plus
Blast to na_te.dros performed on 2019-03-16 08:42:39 has no hits.

AT30637.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:43:36 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10650774..10652078 1..1305 100 -> Plus
chr2L 10652229..10653295 1306..2372 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:31:00 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 1..1959 138..2096 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:54:40 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 1..1959 138..2096 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:48:34 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 1..1959 138..2096 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:19:40 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 1..1959 138..2096 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:47:22 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 1..1959 138..2096 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:18:09 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 1..2372 1..2372 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:54:39 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 1..2372 1..2372 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:48:34 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 366..2737 1..2372 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:19:40 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 1..2372 1..2372 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:47:22 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
CG17098-RA 366..2737 1..2372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:43:36 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10651978..10653282 1..1305 100 -> Plus
2L 10653433..10654499 1306..2372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:43:36 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10651978..10653282 1..1305 100 -> Plus
2L 10653433..10654499 1306..2372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:43:36 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10651978..10653282 1..1305 100 -> Plus
2L 10653433..10654499 1306..2372 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:48:34 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10651978..10653282 1..1305 100 -> Plus
arm_2L 10653433..10654499 1306..2372 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:54:03 Download gff for AT30637.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10651978..10653282 1..1305 100 -> Plus
2L 10653433..10654499 1306..2372 100   Plus

AT30637.hyp Sequence

Translation from 137 to 2095

> AT30637.hyp
MLSHAFNMHPQRRVPVIHEQIAKQCALNIVRVASAMPQPQPRCPSGHVVV
LVELRRTDEQTVHRYQVNVPPTGWTNEDLEEEEKRFQQLVLPGTLDSMGL
KLPLPERPPCPMHGRSIMEMGWSPNSNMGPPPMLMIQSSVHITNGQDGAT
DFATFREPVVTSESPDNLRAHFMASLYQQQPSPLSYSDIWVSDSPSTGLP
RSEALSTTHFPQFYLGENAESMVANKIRPINGYPINGYPISGYPTVPRPA
VKKPRHVAELCLDSNGEYVLNKQLHQPLISRQPDPIIPSVSSRDPHYFIQ
NQSHQLESAIKGLNGYTNVAQESEKPKNGYKYQPAAFADQRIVLQPKLGQ
GQGQAQGAVPGFIPNHLQSRVAMVEPRIRQESLIKPQNPDLALPSEAHPP
VPQDLQSLFRWNYCALCNMVIRSTQSAIDHYSSRAHERRISSWLVRKCYA
NLTGRDADALGGAISQSEFYCKLCDLKLTSLSHAQQHFLGRRHRIAARHR
IRPFSDGFYDREGNWVRTDIKYPMCELCDVIITSESQMAMHLAGARHRRR
VQIAYAGESAGGMEMGIGLVPFDGSHMYRIRGNGSLAPIRPLGSQLLQGS
AYPLSLTDPSAVFYCDACNITLNHLKSVNQHEQGRMHRRNMHRLPAQAVF
FE*

AT30637.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG17098-PA 652 CG17098-PA 1..652 1..652 3478 100 Plus
CG1231-PA 345 CG1231-PA 78..338 388..644 286 29.3 Plus

AT30637.pep Sequence

Translation from 137 to 2095

> AT30637.pep
MLSHAFNMHPQRRVPVIHEQIAKQCALNIVRVASAMPQPQPRCPSGHVVV
LVELRRTDEQTVHRYQVNVPPTGWTNEDLEEEEKRFQQLVLPGTLDSMGL
KLPLPERPPCPMHGRSIMEMGWSPNSNMGPPPMLMIQSSVHITNGQDGAT
DFATFREPVVTSESPDNLRAHFMASLYQQQPSPLSYSDIWVSDSPSTGLP
RSEALSTTHFPQFYLGENAESMVANKIRPINGYPINGYPISGYPTVPRPA
VKKPRHVAELCLDSNGEYVLNKQLHQPLISRQPDPIIPSVSSRDPHYFIQ
NQSHQLESAIKGLNGYTNVAQESEKPKNGYKYQPAAFADQRIVLQPKLGQ
GQGQAQGAVPGFIPNHLQSRVAMVEPRIRQESLIKPQNPDLALPSEAHPP
VPQDLQSLFRWNYCALCNMVIRSTQSAIDHYSSRAHERRISSWLVRKCYA
NLTGRDADALGGAISQSEFYCKLCDLKLTSLSHAQQHFLGRRHRIAARHR
IRPFSDGFYDREGNWVRTDIKYPMCELCDVIITSESQMAMHLAGARHRRR
VQIAYAGESAGGMEMGIGLVPFDGSHMYRIRGNGSLAPIRPLGSQLLQGS
AYPLSLTDPSAVFYCDACNITLNHLKSVNQHEQGRMHRRNMHRLPAQAVF
FE*

AT30637.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15813-PA 714 GF15813-PA 1..714 1..652 1328 42.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:52:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23661-PA 634 GG23661-PA 1..633 1..650 2500 72.5 Plus
Dere\GG14720-PA 341 GG14720-PA 90..334 402..644 313 32 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:52:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10419-PA 637 GH10419-PA 1..627 1..643 759 32.3 Plus
Dgri\GH11857-PA 328 GH11857-PA 41..327 402..650 313 28.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG17098-PA 652 CG17098-PA 1..652 1..652 3478 100 Plus
CG1231-PA 345 CG1231-PA 78..338 388..644 286 29.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23392-PA 662 GI23392-PA 423..660 401..644 659 49.8 Plus
Dmoj\GI10915-PA 385 GI10915-PA 84..382 384..649 323 27.1 Plus
Dmoj\GI23392-PA 662 GI23392-PA 1..188 1..191 233 33.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26619-PA 658 GL26619-PA 1..653 1..643 778 33.8 Plus
Dper\GL15909-PA 326 GL15909-PA 14..324 371..648 271 24.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:52:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14322-PA 666 GA14322-PA 1..661 1..643 786 34.2 Plus
Dpse\GA25277-PA 343 GA25277-PA 31..341 371..648 279 25.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:52:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18648-PA 662 GM18648-PA 1..662 1..652 3040 87 Plus
Dsec\GM14338-PA 237 GM14338-PA 1..230 421..644 225 30.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23721-PA 660 GD23721-PA 1..660 1..652 3082 88.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23886-PA 677 GJ23886-PA 438..675 401..644 663 49.8 Plus
Dvir\GJ18561-PA 393 GJ18561-PA 106..382 402..641 339 28.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15519-PA 664 GK15519-PA 1..656 1..644 888 34 Plus
Dwil\GK25698-PA 433 GK25698-PA 111..233 402..521 246 39.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18477-PA 646 GE18477-PA 1..646 1..652 2576 73.6 Plus
Dyak\GE21083-PA 355 GE21083-PA 92..349 402..645 276 28.5 Plus