BDGP Sequence Production Resources |
Search the DGRC for AT31219
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 312 |
Well: | 19 |
Vector: | pOTB7 |
Associated Gene/Transcript | Rpn13R-RA |
Protein status: | AT31219.pep: gold |
Preliminary Size: | 975 |
Sequenced Size: | 1106 |
Gene | Date | Evidence |
---|---|---|
CG6789 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6789 | 2002-04-21 | Blastp of sequenced clone |
CG6789 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6789 | 2008-04-29 | Release 5.5 accounting |
CG6789 | 2008-08-15 | Release 5.9 accounting |
CG6789 | 2008-12-18 | 5.12 accounting |
1106 bp (1106 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113335
> AT31219.complete ATATTAACTATTCACACAATTCAAGCGATTGGTAATAACTCGAAAATTTC CAGTATCCACATGGCCCAGTCGAATGCACACAATTTGGTCGAGTACAAGG CCGGCCGCATGGTCCTTCTAGGCAAGATGGTCGAACCCGATGACCGCAAA GGACTGCTCTTTGTGCGCCGATCCGCCGATGATAATCAGCTCCATATCCA CTGGATGGATCGGCGTTCCGGGTCCGTTGAGCTGGATATTGTAGCAACGC CGGGCGTCCTCGAGTTCCGTCGCATTGATCAGTGCAAAACCGGTCGGGTT TATGTCCTAAAGTATACACGATCGACGCAGCGTTACTTTTTCTGGATGCA GGAGCTGCAGGCGGATGGGGATGCGTTATTTTGTCAGCGGGTCAATGAAT TGATTGCCAGTGGTGAACGCCAAAGGGATGAGATTGCGGCGGCCGAGGGC GATATGGATACGGATGCGGATCATACAACAGCACGACGCGGTTTCGGTGG CAGTGAGAATCCTCAAATTCTGGAAGAGATGCTGGTCGAAACGCAAGCAA CTTGGCTACCAGCTAACCGGAGTTTGAATCATTGGCAAACTGGTGATGCG ATGGAAGAACCGCCCTTGCCATTTGCCGATCCCGATGCAAATACAGATAC AGATACAGATACATATACATCAGAGTCGGGTATACAGACATTCGATTTGG CAGCTGTTTTACGCCTACATGGCGCCGAAGCAGTGGACAAAGTTCTAAGT TGCCCATCGAGACGTGAAAAACTAATGGCCCAATTGCCCAAAGATCATGA GGCGATGGATGAGCAGTCAGACATACTGGAGCATTTGCATTCGGCGCAAT TCTACGAATCCTTGTCCTCTTTTTCCGTAGGACTTCATTCTGGTGCACTC AGAAAGAGTCTGGAGCCTCTATTGCAAAGTGATGACAATCGCGAGGCCTT GAATGCCGCTCAAGTTGGGGATGTTGAGCGTTTTCTACGTGAACTTGAAC GAAACGATGGGGATTATGGTGGGCCAACCGATTGAACCGTGAGGTTCTTA TAAATATATTTAAATATAGTTAATTAAATATGGCGCATAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6789-RA | 1092 | CG6789-RA | 1..1090 | 1..1090 | 5435 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5024605..5025692 | 1..1088 | 5350 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 5131898..5132987 | 1..1090 | 5435 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 5139996..5141085 | 1..1090 | 5435 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5024605..5025651 | 1..1047 | 95 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6789-RA | 1..975 | 61..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6789-RA | 1..975 | 61..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn13R-RA | 1..975 | 61..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6789-RA | 1..975 | 61..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn13R-RA | 1..975 | 61..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6789-RA | 1..1088 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6789-RA | 1..1088 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn13R-RA | 1..1088 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6789-RA | 1..1088 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn13R-RA | 1..1088 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5131898..5132985 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5131898..5132985 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5131898..5132985 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5025931..5027018 | 1..1088 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5139996..5141083 | 1..1088 | 99 | Plus |
Translation from 1 to 1034
> AT31219.hyp ILTIHTIQAIGNNSKISSIHMAQSNAHNLVEYKAGRMVLLGKMVEPDDRK GLLFVRRSADDNQLHIHWMDRRSGSVELDIVATPGVLEFRRIDQCKTGRV YVLKYTRSTQRYFFWMQELQADGDALFCQRVNELIASGERQRDEIAAAEG DMDTDADHTTARRGFGGSENPQILEEMLVETQATWLPANRSLNHWQTGDA MEEPPLPFADPDANTDTDTDTYTSESGIQTFDLAAVLRLHGAEAVDKVLS CPSRREKLMAQLPKDHEAMDEQSDILEHLHSAQFYESLSSFSVGLHSGAL RKSLEPLLQSDDNREALNAAQVGDVERFLRELERNDGDYGGPTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn13R-PA | 324 | CG6789-PA | 1..324 | 21..344 | 1689 | 100 | Plus |
Rpn13-PF | 389 | CG13349-PF | 10..344 | 22..335 | 434 | 32.6 | Plus |
Rpn13-PB | 389 | CG13349-PB | 10..344 | 22..335 | 434 | 32.6 | Plus |
Rpn13-PA | 389 | CG13349-PA | 10..344 | 22..335 | 434 | 32.6 | Plus |
Rpn13-PE | 424 | CG13349-PE | 10..379 | 22..335 | 419 | 31.6 | Plus |
Translation from 60 to 1034
> AT31219.pep MAQSNAHNLVEYKAGRMVLLGKMVEPDDRKGLLFVRRSADDNQLHIHWMD RRSGSVELDIVATPGVLEFRRIDQCKTGRVYVLKYTRSTQRYFFWMQELQ ADGDALFCQRVNELIASGERQRDEIAAAEGDMDTDADHTTARRGFGGSEN PQILEEMLVETQATWLPANRSLNHWQTGDAMEEPPLPFADPDANTDTDTD TYTSESGIQTFDLAAVLRLHGAEAVDKVLSCPSRREKLMAQLPKDHEAMD EQSDILEHLHSAQFYESLSSFSVGLHSGALRKSLEPLLQSDDNREALNAA QVGDVERFLRELERNDGDYGGPTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21327-PA | 318 | GF21327-PA | 1..311 | 17..312 | 613 | 45.9 | Plus |
Dana\GF11152-PA | 387 | GF11152-PA | 18..347 | 10..315 | 423 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18742-PA | 402 | GG18742-PA | 91..402 | 1..324 | 1194 | 71.7 | Plus |
Dere\GG22456-PA | 389 | GG22456-PA | 18..344 | 10..315 | 416 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22954-PA | 408 | GH22954-PA | 8..121 | 1..115 | 342 | 51.3 | Plus |
Dgri\GH24600-PA | 108 | GH24600-PA | 1..92 | 23..115 | 278 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn13R-PA | 324 | CG6789-PA | 1..324 | 1..324 | 1689 | 100 | Plus |
Rpn13-PF | 389 | CG13349-PF | 10..344 | 2..315 | 434 | 32.6 | Plus |
Rpn13-PB | 389 | CG13349-PB | 10..344 | 2..315 | 434 | 32.6 | Plus |
Rpn13-PA | 389 | CG13349-PA | 10..344 | 2..315 | 434 | 32.6 | Plus |
Rpn13-PE | 424 | CG13349-PE | 10..379 | 2..315 | 419 | 31.6 | Plus |
Rpn13-PD | 424 | CG13349-PD | 10..379 | 2..315 | 419 | 31.6 | Plus |
Rpn13-PG | 424 | CG13349-PG | 10..379 | 2..315 | 419 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18444-PA | 416 | GI18444-PA | 17..121 | 10..115 | 328 | 52.8 | Plus |
Dmoj\GI15270-PA | 203 | GI15270-PA | 75..191 | 2..119 | 302 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17076-PA | 384 | GL17076-PA | 18..345 | 10..315 | 424 | 32.7 | Plus |
Dper\GL14276-PA | 204 | GL14276-PA | 2..136 | 7..151 | 323 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12224-PA | 384 | GA12224-PA | 18..345 | 10..315 | 424 | 32.7 | Plus |
Dpse\GA22734-PA | 319 | GA22734-PA | 3..305 | 8..312 | 356 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12384-PA | 322 | GM12384-PA | 1..322 | 1..324 | 1435 | 83 | Plus |
Dsec\GM20242-PA | 389 | GM20242-PA | 18..344 | 10..315 | 413 | 32.5 | Plus |
Dsec\GM23253-PA | 389 | GM23253-PA | 18..344 | 10..315 | 413 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25728-PA | 389 | GD25728-PA | 18..344 | 10..315 | 407 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16842-PA | 199 | GJ16842-PA | 75..183 | 9..118 | 335 | 55.5 | Plus |
Dvir\GJ21528-PA | 406 | GJ21528-PA | 17..121 | 10..115 | 329 | 52.8 | Plus |