Clone AT31332 Report

Search the DGRC for AT31332

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:313
Well:32
Vector:pOTB7
Associated Gene/TranscriptCG3788-RA
Protein status:AT31332.pep: gold
Preliminary Size:1151
Sequenced Size:1316

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3788 2002-01-01 Sim4 clustering to Release 2
CG3788 2003-01-01 Sim4 clustering to Release 3
CG3788 2003-01-22 Blastp of sequenced clone
CG3788 2008-04-29 Release 5.5 accounting
CG3788 2008-08-15 Release 5.9 accounting
CG3788 2008-12-18 5.12 accounting

Clone Sequence Records

AT31332.complete Sequence

1316 bp (1316 high quality bases) assembled on 2003-01-22

GenBank Submission: AY075301

> AT31332.complete
TCAAACTTTAAATAGACACTCATTCCGGAAGTAAGACAAAATTGCTGGAA
GTAACTTAAAAATTAAAAAAAACAAAAATGTCCAAAAGCAACTGCAGTGA
CTGCACATGCCGTTTGGCCAACGAGGTGGGCCAGCTAAAGGCCATCGTGA
ATGCCCAGAGCAGGACGCTCGCCAAGCTGGTCCGTCAGATGAAGGAAGGC
TGCAAAAAGGACGAGGAGGCCAAGGAATCCACATTGTGCGGCCTGAATCC
CTGCCTGAAGTGCCTGCAGCCTGACATACTCTACCACCTGGGCCTGAATA
CGGAGACCACGGACTTTCCCAAGGTTTTTGGTGATGTGAGGTTTGTATGC
ATGGGAGGTACTCCGGGTCGGATGGAAAACTTTGCCTACTACGTGATGCA
GGAGATCGGGCTGAAGATAAACGCGGCTACCAAGCTACGGAACATATCGG
AGGCCGGCCAGCGATTCTCCTTGTTCAAGGTGGGTCCCGTGCTCTGCGCC
AGCCACGGAATGGGTTGTCCGTCGATCTCCATACTGCTGCACGAACTCAT
CAAGATGATGTACCACGCCAAGTGCAAGGACCCCGTCTTCATCAGAATTG
GCACCAGCGGCGGCATTGGCGTTGAACCCGGCACCGTGATCATTTCCTCC
GAGGCGATTGATGGTCGCTTGAATCCCGTCCACGAGATCCTTGTGCACGG
CGTCAGTGTCCAGCATGCCAGCCAGCTCGATGAGAGTCTGGCCGATGAAA
TCAAGATGTGCCACGATCCCTGCAAGGACAAATATGAAGCTGTCATCGGC
CGGACTCTGTGTGCCCATGACTTCTACGAAGGCCAGTCGCGCCTCGATGG
AGCCTTCTGCGAGTACACGCCCGAAATGAAGAAATCCTACTTGGAGACGC
TGCAGAGCCAGCAGGTGAAGAATATCGAGATGGAGAGCTTGGCCTTTGCC
GCCCTCACCAGTAGGGCCAACATCAGGGGCGCGGTCGTCTGTGTGGCCAT
CCTGAATCGCCTAAATGGGGATCAAATCAAAACGCCACATGATGTTTTGT
CCAAATGGGAGAAGAGACCACAGGAGCTGGTGGCCCGCTATATACGCAAG
GTTCTTTACCATAACGACGATGACGATGAGTCGGAGCAACCGGAGGACGA
GGCCGAGGCAGGAGCAGCTGGGGGCGGGGACACCCAAAAGGCGCCTGTAG
AAGAAGCCGAGTAAGAAGTCCTTCGTATCTAAGTAAACGGTTCTGAATTG
CTAGTTCAAAGATCATTAAAGACATCTCTGGTTGTTCAGTTCAATGGAAA
AAAAAAAAAAAAAAAA

AT31332.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG3788-RA 1372 CG3788-RA 70..1366 1..1298 6435 99.8 Plus
CG6330-RA 1925 CG6330-RA 607..783 467..643 345 79.6 Plus
CG6330-RB 1930 CG6330-RB 612..788 467..643 345 79.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:42:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18818885..18819569 1025..341 3395 99.7 Minus
chr2R 21145070 chr2R 18818556..18818827 1297..1026 1330 99.3 Minus
chr2R 21145070 chr2R 18819640..18819840 341..141 1005 100 Minus
chr2R 21145070 chr2R 18819905..18820044 141..1 655 99.3 Minus
chr3R 27901430 chr3R 22774156..22774332 643..467 330 79.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:03:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:42:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22932364..22933048 1025..341 3410 99.9 Minus
2R 25286936 2R 22932034..22932306 1298..1026 1365 100 Minus
2R 25286936 2R 22933119..22933319 341..141 1005 100 Minus
2R 25286936 2R 22933384..22933523 141..1 655 99.3 Minus
3R 32079331 3R 26951118..26951294 643..467 345 79.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22933563..22934247 1025..341 3410 99.8 Minus
2R 25260384 2R 22933233..22933505 1298..1026 1365 100 Minus
2R 25260384 2R 22934318..22934518 341..141 1005 100 Minus
2R 25260384 2R 22934583..22934722 141..1 665 99.2 Minus
3R 31820162 3R 26691949..26692125 643..467 345 79.6 Minus
Blast to na_te.dros performed on 2019-03-16 17:42:21 has no hits.

AT31332.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:43:07 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18818556..18818827 1026..1297 99 <- Minus
chr2R 18818885..18819568 342..1025 99 <- Minus
chr2R 18819640..18819839 142..341 100 <- Minus
chr2R 18819905..18820044 1..141 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:32:17 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1137 78..1214 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:54:48 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RB 1..1137 78..1214 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:00:25 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1137 78..1214 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:45:51 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1137 78..1214 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:05:06 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1137 78..1214 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:09:53 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1296 1..1297 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:54:48 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1296 1..1297 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:00:25 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1296 1..1297 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:45:51 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1296 1..1297 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:05:06 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
CG3788-RA 1..1296 1..1297 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:43:07 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22932035..22932306 1026..1297 100 <- Minus
2R 22932364..22933047 342..1025 99 <- Minus
2R 22933119..22933318 142..341 100 <- Minus
2R 22933384..22933523 1..141 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:43:07 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22932035..22932306 1026..1297 100 <- Minus
2R 22932364..22933047 342..1025 99 <- Minus
2R 22933119..22933318 142..341 100 <- Minus
2R 22933384..22933523 1..141 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:43:07 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22932035..22932306 1026..1297 100 <- Minus
2R 22932364..22933047 342..1025 99 <- Minus
2R 22933119..22933318 142..341 100 <- Minus
2R 22933384..22933523 1..141 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:00:25 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18819558..18819829 1026..1297 100 <- Minus
arm_2R 18819887..18820570 342..1025 99 <- Minus
arm_2R 18820642..18820841 142..341 100 <- Minus
arm_2R 18820907..18821046 1..141 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:16:53 Download gff for AT31332.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22933252..22933523 1026..1297 100 <- Minus
2R 22933581..22934264 342..1025 99 <- Minus
2R 22934336..22934535 142..341 100 <- Minus
2R 22934601..22934740 1..141 99   Minus

AT31332.pep Sequence

Translation from 77 to 1213

> AT31332.pep
MSKSNCSDCTCRLANEVGQLKAIVNAQSRTLAKLVRQMKEGCKKDEEAKE
STLCGLNPCLKCLQPDILYHLGLNTETTDFPKVFGDVRFVCMGGTPGRME
NFAYYVMQEIGLKINAATKLRNISEAGQRFSLFKVGPVLCASHGMGCPSI
SILLHELIKMMYHAKCKDPVFIRIGTSGGIGVEPGTVIISSEAIDGRLNP
VHEILVHGVSVQHASQLDESLADEIKMCHDPCKDKYEAVIGRTLCAHDFY
EGQSRLDGAFCEYTPEMKKSYLETLQSQQVKNIEMESLAFAALTSRANIR
GAVVCVAILNRLNGDQIKTPHDVLSKWEKRPQELVARYIRKVLYHNDDDD
ESEQPEDEAEAGAAGGGDTQKAPVEEAE*

AT31332.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:22:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11317-PA 383 GF11317-PA 4..372 2..370 1480 73 Plus
Dana\GF18559-PA 368 GF18559-PA 50..335 57..343 881 59.2 Plus
Dana\GF18560-PA 300 GF18560-PA 9..297 57..343 519 40.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20084-PA 378 GG20084-PA 1..378 1..378 1964 96 Plus
Dere\GG12162-PA 368 GG12162-PA 50..338 57..346 896 58.6 Plus
Dere\GG24468-PA 308 GG24468-PA 18..306 57..343 589 38.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19384-PA 350 GH19384-PA 6..346 13..352 1043 56.1 Plus
Dgri\GH19373-PA 346 GH19373-PA 17..316 46..346 945 56.5 Plus
Dgri\GH19395-PA 301 GH19395-PA 11..299 57..343 643 42.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG3788-PB 378 CG3788-PB 1..378 1..378 1984 100 Plus
CG3788-PA 378 CG3788-PA 1..378 1..378 1984 100 Plus
CG6330-PB 347 CG6330-PB 18..317 46..346 932 57.5 Plus
CG6330-PA 368 CG6330-PA 50..338 57..346 928 59 Plus
CG17224-PD 300 CG17224-PD 9..298 56..343 596 40.4 Plus
CG17224-PC 300 CG17224-PC 9..298 56..343 596 40.4 Plus
CG17224-PB 300 CG17224-PB 9..298 56..343 596 40.4 Plus
CG17224-PA 300 CG17224-PA 9..298 56..343 596 40.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22215-PA 360 GI22215-PA 5..347 9..350 1076 57.3 Plus
Dmoj\GI22212-PA 363 GI22212-PA 45..330 57..343 930 58.5 Plus
Dmoj\GI22213-PA 297 GI22213-PA 8..296 57..343 614 40.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23743-PA 373 GL23743-PA 16..370 11..368 1204 62.3 Plus
Dper\GL27259-PA 365 GL27259-PA 47..332 57..343 946 59.6 Plus
Dper\GL25985-PA 256 GL25985-PA 1..236 107..343 824 62.9 Plus
Dper\GL25965-PA 223 GL25965-PA 47..220 24..200 681 69.5 Plus
Dper\GL27260-PA 297 GL27260-PA 9..295 57..343 590 39.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26722-PA 373 GA26722-PA 16..360 11..357 1211 63.4 Plus
Dpse\GA23650-PA 377 GA23650-PA 37..373 24..366 1152 62.4 Plus
Dpse\GA19516-PB 347 GA19516-PB 18..314 46..343 950 58.1 Plus
Dpse\GA19516-PA 365 GA19516-PA 47..332 57..343 946 59.6 Plus
Dpse\GA27021-PA 297 GA27021-PA 9..295 57..343 599 40.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15599-PA 378 GM15599-PA 1..378 1..378 2004 98.1 Plus
Dsec\GM10155-PA 347 GM10155-PA 18..317 46..346 963 57.5 Plus
Dsec\GM18176-PA 300 GM18176-PA 3..298 50..343 597 38.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25095-PA 378 GD25095-PA 1..378 1..378 2004 98.1 Plus
Dsim\GD18110-PA 347 GD18110-PA 18..317 46..346 963 57.5 Plus
Dsim\GD12000-PA 279 GD12000-PA 10..279 57..324 551 39.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24333-PA 343 GJ24333-PA 1..324 22..344 1093 60.2 Plus
Dvir\GJ24332-PA 346 GJ24332-PA 17..313 46..343 945 57.7 Plus
Dvir\GJ24335-PA 303 GJ24335-PA 4..284 66..344 675 45.9 Plus
Dvir\GJ24336-PA 299 GJ24336-PA 9..297 57..343 645 43.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15591-PA 371 GK15591-PA 1..346 1..344 1135 59.2 Plus
Dwil\GK11445-PA 368 GK11445-PA 50..335 57..343 950 58.9 Plus
Dwil\GK11364-PA 363 GK11364-PA 33..344 31..343 719 44.1 Plus
Dwil\GK11446-PA 299 GK11446-PA 9..298 57..343 671 43 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11621-PA 382 GE11621-PA 1..382 1..378 1884 92.9 Plus
Dyak\GE10606-PA 347 GE10606-PA 18..317 46..346 900 57.1 Plus
Dyak\GE14961-PA 300 GE14961-PA 3..298 50..343 617 39.9 Plus

AT31332.hyp Sequence

Translation from 77 to 1213

> AT31332.hyp
MSKSNCSDCTCRLANEVGQLKAIVNAQSRTLAKLVRQMKEGCKKDEEAKE
STLCGLNPCLKCLQPDILYHLGLNTETTDFPKVFGDVRFVCMGGTPGRME
NFAYYVMQEIGLKINAATKLRNISEAGQRFSLFKVGPVLCASHGMGCPSI
SILLHELIKMMYHAKCKDPVFIRIGTSGGIGVEPGTVIISSEAIDGRLNP
VHEILVHGVSVQHASQLDESLADEIKMCHDPCKDKYEAVIGRTLCAHDFY
EGQSRLDGAFCEYTPEMKKSYLETLQSQQVKNIEMESLAFAALTSRANIR
GAVVCVAILNRLNGDQIKTPHDVLSKWEKRPQELVARYIRKVLYHNDDDD
ESEQPEDEAEAGAAGGGDTQKAPVEEAE*

AT31332.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:26:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG3788-PB 378 CG3788-PB 1..378 1..378 1984 100 Plus
CG3788-PA 378 CG3788-PA 1..378 1..378 1984 100 Plus
CG6330-PB 347 CG6330-PB 18..317 46..346 932 57.5 Plus
CG6330-PA 368 CG6330-PA 50..338 57..346 928 59 Plus
CG17224-PD 300 CG17224-PD 9..298 56..343 596 40.4 Plus