Clone AT31725 Report

Search the DGRC for AT31725

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:317
Well:25
Vector:pOTB7
Associated Gene/TranscriptCG11141-RA
Protein status:AT31725.pep: gold
Sequenced Size:2683

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11141 2004-03-24 Blastp of sequenced clone
CG11141 2008-04-29 Release 5.5 accounting
CG11141 2008-08-15 Release 5.9 accounting
CG11141 2008-12-18 5.12 accounting

Clone Sequence Records

AT31725.complete Sequence

2683 bp (2683 high quality bases) assembled on 2004-03-24

GenBank Submission: BT012320

> AT31725.complete
TATACTTTACGTTAGACATCTTAAATCAAATAGAAATTCGTTATATGTTA
TTTTTCAGTGTGCAATTTTTTCAGTTAATTTACAAATAAGCGTCAAAGTT
ATTGTGGAAGCTCGCATTTTTAAATGACCCCCCCAACAGAGCTGCCCACT
TTTATGCATATAGCGGGCGTTGCCAGATGCCAGCAGCTCGGTTTTGTTGA
TTGTTGTGTTGAGTCAGGAGCAAAAAGAAAACACCGATAAAAGGAGAGAA
CTGCGAAATCCGGAAATCCCCGTCCTGAGGCGCAATTTGCCCCAGCAAGA
ACATGGCCAGCAGCAAGGAGTTATGCTCCATCCGGGAATGGGCACCGCTC
ACGGAGGTCATCGAGCGGATTCCGGCGCGCCTGCAGCGCGGTTTCTTTCC
GGCGAATCTCAACCTGACCTGTGTGGACGCCACCGAGGAGTTCCTAGCCA
TGGGCAGCGACGCGGGCATCGTCTTCTGGTATAATCGCCACACGGGCGAG
ATGCAGAAGCTGAAGGCTGAGGTGGCCACTCGGATTACGTGCGTGCGGGT
TGTCAACTCCGTCGAGTACATGGTTGCGGCTGGGTGCGCCAACGGGCAGG
TGAGCATCTTCCAGATACAGAAGGAGCTGCCACGGGACCTTGATTTGGTG
GCTCCTTGCACCAAGAGTCGGCCCATTGAGCGGTATACTATCCGGGATCT
GCACAAGTGCGTGGTCAGCTGCTGTGAGTGGTCCAAGAACGGGATGAAGC
TCTATTCCGGCGATCGCCAGGGAGTGGTGGTGCTCACGGAGCTCGATTAC
CAGGCGCACCTCAGCAAATCGGTGGAGATCCTGAGCGAAGCATACGAGAT
CGTACAGCTTAGCGTTCGGCAGAGCTACCTACTGGTGGCCACCCTCTACC
GTTGCATCGTATGCCAGATGGACGCTCAAACCTCGCAGTGGAACATCACC
CAGGTGGGAAAGAAGGATCGCAAACAGCTCATCGACTGCGGGGCCATATT
TCTGAAGAAACAGGAAGCAAACAAGCCGCAACTTGTCTGCGGACGTCCTG
GCCTGCGCTTCTGGGTGGCAGACGCTGCGGGAAATGTGTCCAAAACAGTG
ATATTCCGAGATGCCGTTCTGCGCAGTCCCACCTGGGAAATACCTATTCT
GAACCCCAAGCAGCGCAGTGAGCCGTCCGGTACCCACCACACGTCTGCGT
CTACATCTTCGACTAGACATTCTGGACTGGCAGATGGCGATGTGGGCTAC
GTGGCCAGCAGCAACTTTCGGCAACTATATCTCTACGATGGCCACGACTC
ACTACTGGTAACACACGACGATGCAACTCTGTACGTACTTAACTTGGATC
GACTCAAAGTAGAAGCCGTTGCGCGAGGATTGCGGAAGATCCTTGATTTC
TGCGTCTGTGGCAAAGAGATCTTCGTGTTGGAGGGCAATCGCACATTGCT
TCGTCTAGCTCCTTTACCGGAACCACCAAACAAGACGGCCAAGGTCATCT
TCAATCCCCTGATGCCGCCTCCAGTTCCGGTTCTAGGCTCGCACCTATCG
CAACTGGAGTCGCCGATAGAGCTTCAGGCGGAGCCGGTTCTTCAAAACGC
AGAGGAGTGTTTCGAGTTGTCACCGGTGGAGCAACTGAACCTTAATGTGC
CCATCGAAATAGCTGTGGAGTCGCCACTGACTCAACAAAATCGTCGCTTG
GAAATCTTCCGCCGCATCGGAGAAATGGACTTCGAGCAGTCCATCGTCCA
CACCACCCGCAAGACATCCGTAGGCAAACCGCCCGAGGCCAGTGGTGTGG
GAATCGTTGAGATTGGCCATGAGACCCATGAGCTGCGGTTGCCGCTTACC
AATGCCGCCACACTAATGGAGGCGAGCTACTGCCAAATGGAGAACAATGG
TCTGGCCTCTCCACTGGACATGAAGGCAGCCTTCCTTCAGCATCTGCCCG
ATGCGCTAAGTCCCACCACCTTGCAGAAGACCGTTGCGGAGAAGGCCAAG
ACCCTGGCCGCCGAGCTGGATCTGCCCGAGGTGCATCTGGCGCCGTTGTC
GCAGGAGGAGCTGCATGCTGTCCAGGCTCAGACCCCTCAAATAAGCGACC
CTCTAATCAGGTGCTATCCCACGCACCTGGAAGAGGCCAGTATCCAAACG
AGTTCGCGGGAAAATGCAACCAACCCAGCTGATGATTATCATGTAGGCGA
GCCCGTGGACGGGATACGGTCATTTGGCGTCTCCAAGCGTAAAATGGCTC
CGCTTAAGTTCGTCTTAAGCCAGCCAAAGCCGACTCTGAAGTTGGAAGAG
AACAGGGATGATGAGGAGTACACCAGCTTCCTACCCGATTTTAGGCGGGC
TGGCGATCCACTGGCGATCCACAAGGAAACGCCAGCCACCAGTGACTCAA
ACACCTCCAGCGAGTGGGAGTTTTTGGACAACTAGTTCAGTATTAGAATT
AAGTGCATACTCATTCGATTCCATTTGCATTTTTGCACTTTATTCTCTTT
CTATGTTTCTATGTTTGCAAAAGTGTTGTGTTTATCAGATTGTGATCACC
GTGATTTAGTTACTCTTTTTAGTGGAATTTACATACATAAGTGTACATAA
TATTAGACGTATACTGACCCCACCAGTATCTACACAAATACATATATTTC
AAATATTAGCCTTTAAAAAAAAAAAAAAAAAAA

AT31725.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG11141-RA 2949 CG11141-RA 78..2742 1..2665 13310 99.9 Plus
CG11141-RB 2842 CG11141-RB 29..2635 59..2665 13020 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3348610..3349698 1894..806 5445 100 Minus
chr2R 21145070 chr2R 3347785..3348554 2664..1895 3850 100 Minus
chr2R 21145070 chr2R 3350138..3350660 523..1 2615 100 Minus
chr2R 21145070 chr2R 3349766..3350052 806..520 1435 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:04:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:49:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7461256..7462344 1894..806 5430 99.9 Minus
2R 25286936 2R 7460430..7461200 2665..1895 3855 100 Minus
2R 25286936 2R 7462784..7463306 523..1 2615 100 Minus
2R 25286936 2R 7462412..7462698 806..520 1435 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7462455..7463543 1894..806 5430 99.9 Minus
2R 25260384 2R 7461629..7462399 2665..1895 3855 100 Minus
2R 25260384 2R 7463983..7464505 523..1 2615 100 Minus
2R 25260384 2R 7463611..7463897 806..520 1435 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:49:06 has no hits.

AT31725.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:49:55 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3347785..3348554 1895..2664 100 <- Minus
chr2R 3348610..3349697 807..1894 100 <- Minus
chr2R 3349766..3350050 522..806 100 <- Minus
chr2R 3350140..3350660 1..521 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:32:46 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RA 1..2133 303..2435 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:39:01 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RA 1..2133 303..2435 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:51:04 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RB 1..2133 303..2435 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:22:48 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RA 1..2133 303..2435 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:00:53 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RB 1..2133 303..2435 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:47:12 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RA 78..2741 1..2664 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:39:01 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RA 78..2741 1..2664 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:51:04 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RB 90..2753 1..2664 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:22:48 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RA 78..2741 1..2664 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:00:53 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG11141-RB 90..2753 1..2664 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:49:55 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7460431..7461200 1895..2664 100 <- Minus
2R 7461256..7462343 807..1894 99 <- Minus
2R 7462412..7462696 522..806 100 <- Minus
2R 7462786..7463306 1..521 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:49:55 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7460431..7461200 1895..2664 100 <- Minus
2R 7461256..7462343 807..1894 99 <- Minus
2R 7462412..7462696 522..806 100 <- Minus
2R 7462786..7463306 1..521 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:49:55 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7460431..7461200 1895..2664 100 <- Minus
2R 7461256..7462343 807..1894 99 <- Minus
2R 7462412..7462696 522..806 100 <- Minus
2R 7462786..7463306 1..521 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:51:04 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3349917..3350201 522..806 100 <- Minus
arm_2R 3347936..3348705 1895..2664 100 <- Minus
arm_2R 3348761..3349848 807..1894 99 <- Minus
arm_2R 3350291..3350811 1..521 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:00:12 Download gff for AT31725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7461630..7462399 1895..2664 100 <- Minus
2R 7462455..7463542 807..1894 99 <- Minus
2R 7463611..7463895 522..806 100 <- Minus
2R 7463985..7464505 1..521 100   Minus

AT31725.pep Sequence

Translation from 302 to 2434

> AT31725.pep
MASSKELCSIREWAPLTEVIERIPARLQRGFFPANLNLTCVDATEEFLAM
GSDAGIVFWYNRHTGEMQKLKAEVATRITCVRVVNSVEYMVAAGCANGQV
SIFQIQKELPRDLDLVAPCTKSRPIERYTIRDLHKCVVSCCEWSKNGMKL
YSGDRQGVVVLTELDYQAHLSKSVEILSEAYEIVQLSVRQSYLLVATLYR
CIVCQMDAQTSQWNITQVGKKDRKQLIDCGAIFLKKQEANKPQLVCGRPG
LRFWVADAAGNVSKTVIFRDAVLRSPTWEIPILNPKQRSEPSGTHHTSAS
TSSTRHSGLADGDVGYVASSNFRQLYLYDGHDSLLVTHDDATLYVLNLDR
LKVEAVARGLRKILDFCVCGKEIFVLEGNRTLLRLAPLPEPPNKTAKVIF
NPLMPPPVPVLGSHLSQLESPIELQAEPVLQNAEECFELSPVEQLNLNVP
IEIAVESPLTQQNRRLEIFRRIGEMDFEQSIVHTTRKTSVGKPPEASGVG
IVEIGHETHELRLPLTNAATLMEASYCQMENNGLASPLDMKAAFLQHLPD
ALSPTTLQKTVAEKAKTLAAELDLPEVHLAPLSQEELHAVQAQTPQISDP
LIRCYPTHLEEASIQTSSRENATNPADDYHVGEPVDGIRSFGVSKRKMAP
LKFVLSQPKPTLKLEENRDDEEYTSFLPDFRRAGDPLAIHKETPATSDSN
TSSEWEFLDN*

AT31725.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:33:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11949-PA 707 GF11949-PA 1..707 1..710 2793 75.2 Plus
Dana\GF16328-PA 825 GF16328-PA 27..335 36..376 169 24.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10747-PA 708 GG10747-PA 1..708 1..710 3383 93.4 Plus
Dere\GG17435-PA 826 GG17435-PA 27..335 36..376 186 23.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20731-PA 687 GH20731-PA 1..687 1..710 2549 69.7 Plus
Dgri\GH22864-PA 864 GH22864-PA 27..354 36..382 191 22.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG11141-PC 710 CG11141-PC 1..710 1..710 3678 100 Plus
CG11141-PA 710 CG11141-PA 1..710 1..710 3678 100 Plus
CG11141-PB 710 CG11141-PB 1..710 1..710 3678 100 Plus
p-PC 826 CG9770-PC 27..334 36..375 176 23.4 Plus
p-PB 826 CG9770-PB 27..334 36..375 176 23.4 Plus
p-PA 826 CG9770-PA 27..334 36..375 176 23.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20815-PA 667 GI20815-PA 1..667 1..710 2477 69 Plus
Dmoj\GI10229-PA 850 GI10229-PA 27..350 36..382 171 21.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11559-PA 703 GL11559-PA 1..703 1..710 2913 78.4 Plus
Dper\GL24499-PA 830 GL24499-PA 26..343 36..382 181 23.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10789-PA 703 GA10789-PA 1..703 1..710 2910 78.3 Plus
Dpse\GA22022-PA 830 GA22022-PA 26..343 36..382 181 23.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20794-PA 690 GM20794-PA 1..168 1..168 923 99.4 Plus
Dsec\GM26327-PA 826 GM26327-PA 27..335 36..376 177 23.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:33:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10254-PA 710 GD10254-PA 1..710 1..710 3710 96.8 Plus
Dsim\GD20853-PA 826 GD20853-PA 27..335 36..376 176 23.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20548-PA 690 GJ20548-PA 1..690 1..710 2622 72.4 Plus
Dvir\GJ11033-PA 851 GJ11033-PA 27..350 36..382 171 21.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22008-PA 692 GK22008-PA 2..692 3..710 2773 73.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23992-PA 708 GE23992-PA 1..708 1..710 3444 92.8 Plus
Dyak\GE24836-PA 826 GE24836-PA 27..335 36..376 185 23.9 Plus

AT31725.hyp Sequence

Translation from 302 to 2434

> AT31725.hyp
MASSKELCSIREWAPLTEVIERIPARLQRGFFPANLNLTCVDATEEFLAM
GSDAGIVFWYNRHTGEMQKLKAEVATRITCVRVVNSVEYMVAAGCANGQV
SIFQIQKELPRDLDLVAPCTKSRPIERYTIRDLHKCVVSCCEWSKNGMKL
YSGDRQGVVVLTELDYQAHLSKSVEILSEAYEIVQLSVRQSYLLVATLYR
CIVCQMDAQTSQWNITQVGKKDRKQLIDCGAIFLKKQEANKPQLVCGRPG
LRFWVADAAGNVSKTVIFRDAVLRSPTWEIPILNPKQRSEPSGTHHTSAS
TSSTRHSGLADGDVGYVASSNFRQLYLYDGHDSLLVTHDDATLYVLNLDR
LKVEAVARGLRKILDFCVCGKEIFVLEGNRTLLRLAPLPEPPNKTAKVIF
NPLMPPPVPVLGSHLSQLESPIELQAEPVLQNAEECFELSPVEQLNLNVP
IEIAVESPLTQQNRRLEIFRRIGEMDFEQSIVHTTRKTSVGKPPEASGVG
IVEIGHETHELRLPLTNAATLMEASYCQMENNGLASPLDMKAAFLQHLPD
ALSPTTLQKTVAEKAKTLAAELDLPEVHLAPLSQEELHAVQAQTPQISDP
LIRCYPTHLEEASIQTSSRENATNPADDYHVGEPVDGIRSFGVSKRKMAP
LKFVLSQPKPTLKLEENRDDEEYTSFLPDFRRAGDPLAIHKETPATSDSN
TSSEWEFLDN*

AT31725.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11141-PC 710 CG11141-PC 1..710 1..710 3678 100 Plus
CG11141-PA 710 CG11141-PA 1..710 1..710 3678 100 Plus
CG11141-PB 710 CG11141-PB 1..710 1..710 3678 100 Plus
p-PA 826 CG9770-PA 27..334 36..375 176 23.4 Plus