AT31812.complete Sequence
695 bp (695 high quality bases) assembled on 2003-01-22
GenBank Submission: AY075307
> AT31812.complete
CAGTCATCCCCTTTGACTTGAACGAAGCACCTATTTATACATTCTTTTAT
AAATTTGGAAAATTTATTTGTACATTTCGGCATGACATTCTTCGAGCAGA
TCAGTGATCACTTTTGCCGCGTTGTGCACACCAATCTCAAGATACCTCTA
TCATGTTGCGAAAGGCGCATCAACTGGAAAATCTCGAAAAGTATCGATTT
ATTGGTATTCTTTTATACCCTCAACATCGGTGTCCTTCGATTGTTAATAA
ATTTTATAGATTTCATGATCGTTTTCTTCGGATGGCCAAGCAATCTTTTG
ATTTTAAAGGACTTCAATTCGCGGCGCTTTCGAGCGCTCACACACTTTTT
ACTGGTGAGAGCGTACATGCTAATGATATACTCCATTGTATTTATCACTC
CGCATAAGAATAATATCTTCGTTCCGCTTTTTGCCATCATCATGACCATC
GATGTGTATGTCATTAAATTAGATATGAAGCGACGTGGATTGATGCCTCT
GGAGCGCAGTGTGCCCCCCCTATGGGAAATATTGATCAGCTTGTGCTGTG
TTGTTGCCGGGCAATGGCTGCTCAAGTATTTGATCTTTCATTAGCGTACG
GATTTCATTGTAATGTTTTGTTCGCCTTATAATTGCTTTTTTTCTGAAAT
ATACATTGAATACATTGTCACTCCTCTAAAAAAAAAAAAAAAAAA
AT31812.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:44:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32588-RA | 694 | CG32588-RA | 14..692 | 1..679 | 3380 | 99.8 | Plus |
CG33252-RA | 880 | CG33252-RA | 148..342 | 88..282 | 405 | 80.5 | Plus |
CG33252-RA | 880 | CG33252-RA | 359..480 | 284..405 | 205 | 77.8 | Plus |
CG33252-RA | 880 | CG33252-RA | 39..83 | 1..45 | 150 | 88.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:30:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 15095915..15096198 | 677..394 | 1420 | 100 | Minus |
chrX | 22417052 | chrX | 15096502..15096744 | 243..1 | 1215 | 100 | Minus |
chrX | 22417052 | chrX | 15096277..15096427 | 393..243 | 755 | 100 | Minus |
chrX | 22417052 | chrX | 15111065..15111224 | 240..81 | 425 | 84.4 | Minus |
chrX | 22417052 | chrX | 16786566..16786718 | 240..88 | 300 | 79.7 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:04:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:30:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15205805..15206090 | 679..394 | 1430 | 100 | Minus |
X | 23542271 | X | 15206394..15206636 | 243..1 | 1215 | 100 | Minus |
X | 23542271 | X | 15206169..15206319 | 393..243 | 740 | 99.3 | Minus |
X | 23542271 | X | 15220940..15221099 | 240..81 | 425 | 84.4 | Minus |
X | 23542271 | X | 16896936..16897088 | 240..88 | 300 | 79.7 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:05:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 15213903..15214188 | 679..394 | 1430 | 100 | Minus |
X | 23527363 | X | 15214492..15214734 | 243..1 | 1215 | 100 | Minus |
X | 23527363 | X | 15214267..15214417 | 393..243 | 740 | 99.3 | Minus |
X | 23527363 | X | 15229038..15229197 | 240..81 | 425 | 84.3 | Minus |
X | 23527363 | X | 16905034..16905186 | 240..88 | 300 | 79.7 | Minus |
X | 23527363 | X | 16904787..16904896 | 393..284 | 175 | 77.2 | Minus |
X | 23527363 | X | 15229262..15229301 | 40..1 | 155 | 92.5 | Minus |
X | 23527363 | X | 16905251..16905295 | 45..1 | 150 | 88.8 | Minus |
X | 23527363 | X | 15228822..15228900 | 362..284 | 140 | 78.4 | Minus |
X | 23527363 | X | 16904913..16904946 | 282..249 | 140 | 94.1 | Minus |
Blast to na_te.dros performed on 2019-03-16 07:30:18 has no hits.
AT31812.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:31:19 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 15095915..15096198 | 394..677 | 100 | <- | Minus |
chrX | 15096277..15096426 | 244..393 | 100 | <- | Minus |
chrX | 15096502..15096744 | 1..243 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:32:52 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..513 | 82..594 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:38:49 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..513 | 82..594 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:07:52 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..513 | 82..594 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:15:41 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..513 | 82..594 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:32:41 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..513 | 82..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:43:19 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..673 | 1..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:38:49 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..673 | 1..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:07:52 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..677 | 1..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:15:43 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..673 | 1..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:32:41 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32588-RA | 1..677 | 1..677 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:19 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15206169..15206318 | 244..393 | 99 | <- | Minus |
X | 15206394..15206636 | 1..243 | 100 | | Minus |
X | 15205807..15206090 | 394..677 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:19 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15206169..15206318 | 244..393 | 99 | <- | Minus |
X | 15206394..15206636 | 1..243 | 100 | | Minus |
X | 15205807..15206090 | 394..677 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:19 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15206169..15206318 | 244..393 | 99 | <- | Minus |
X | 15206394..15206636 | 1..243 | 100 | | Minus |
X | 15205807..15206090 | 394..677 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:07:52 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15100202..15100351 | 244..393 | 99 | <- | Minus |
arm_X | 15099840..15100123 | 394..677 | 100 | <- | Minus |
arm_X | 15100427..15100669 | 1..243 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:51:36 Download gff for
AT31812.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15213905..15214188 | 394..677 | 100 | <- | Minus |
X | 15214267..15214416 | 244..393 | 99 | <- | Minus |
X | 15214492..15214734 | 1..243 | 100 | | Minus |
AT31812.pep Sequence
Translation from 81 to 593
> AT31812.pep
MTFFEQISDHFCRVVHTNLKIPLSCCERRINWKISKSIDLLVFFYTLNIG
VLRLLINFIDFMIVFFGWPSNLLILKDFNSRRFRALTHFLLVRAYMLMIY
SIVFITPHKNNIFVPLFAIIMTIDVYVIKLDMKRRGLMPLERSVPPLWEI
LISLCCVVAGQWLLKYLIFH*
AT31812.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:59:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19426-PA | 206 | GG19426-PA | 1..194 | 1..168 | 167 | 31.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32588-PA | 170 | CG32588-PA | 1..170 | 1..170 | 895 | 100 | Plus |
CG43075-PA | 174 | CG43075-PA | 1..172 | 1..168 | 496 | 56.1 | Plus |
CG33252-PA | 174 | CG33252-PA | 1..173 | 1..169 | 420 | 52.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:59:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM11999-PA | 174 | GM11999-PA | 1..169 | 1..165 | 433 | 51.8 | Plus |
Dsec\GM11997-PA | 174 | GM11997-PA | 1..169 | 1..165 | 418 | 50.6 | Plus |
Dsec\GM13355-PA | 162 | GM13355-PA | 1..157 | 1..165 | 286 | 41.8 | Plus |
Dsec\GM13356-PA | 162 | GM13356-PA | 1..157 | 1..165 | 286 | 41.8 | Plus |
Dsec\GM13354-PA | 162 | GM13354-PA | 1..157 | 1..165 | 286 | 41.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:59:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD15816-PA | 172 | GD15816-PA | 1..169 | 1..165 | 424 | 51.2 | Plus |
Dsim\GD24501-PA | 174 | GD24501-PA | 1..172 | 1..168 | 413 | 50.9 | Plus |
Dsim\GD24640-PA | 161 | GD24640-PA | 1..157 | 1..165 | 261 | 39.4 | Plus |
Dsim\GD15713-PA | 162 | GD15713-PA | 1..149 | 1..157 | 242 | 38.5 | Plus |
Dsim\GD15714-PA | 155 | GD15714-PA | 1..128 | 1..135 | 227 | 41 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:59:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16063-PA | 180 | GE16063-PA | 1..177 | 1..168 | 261 | 37 | Plus |
Dyak\GE16065-PA | 180 | GE16065-PA | 1..177 | 1..168 | 254 | 37.6 | Plus |
AT31812.hyp Sequence
Translation from 81 to 593
> AT31812.hyp
MTFFEQISDHFCRVVHTNLKIPLSCCERRINWKISKSIDLLVFFYTLNIG
VLRLLINFIDFMIVFFGWPSNLLILKDFNSRRFRALTHFLLVRAYMLMIY
SIVFITPHKNNIFVPLFAIIMTIDVYVIKLDMKRRGLMPLERSVPPLWEI
LISLCCVVAGQWLLKYLIFH*
AT31812.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 06:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32588-PA | 170 | CG32588-PA | 1..170 | 1..170 | 895 | 100 | Plus |
CG43075-PA | 174 | CG43075-PA | 1..172 | 1..168 | 496 | 56.1 | Plus |
CG33252-PA | 174 | CG33252-PA | 1..173 | 1..169 | 420 | 52.3 | Plus |