Clone Sequence Records
BO01131.3prime Sequence
873 bp (797 high quality bases) assembled on 2005-11-30
> BO01131.3prime
ATGGTCTAGAAAGCTTGCGGTGTACAGCTCCTCTCCATCGGGAATGGCTT
CCTCGTACTCGAAGTCCTCAAAATTTGCGTCCTCATCCTGAAGTACCTCG
TGGTCCTCATATTGTTCCTCGTCAATGTTATCTAACATTACGTCCAGTTC
AGCCTGGTTGTCCTCCATTTCTGCCTGCCCCTCTTCCATATATCCCGGAA
ACTCCGCCGGATCGACTTCAGACTGGAATTCCTCTTTTGGACCATTAACC
AGCAAGTTGACCCGCTTGCGGTGATACTTTGTGGAGTAGTGCCGATGCAA
AAACTGCGCCTCCTTGAACTCCTTGTTGCATGTGAGGCAGATATGGACAT
CCGGTTGGTCACTCTTGTGCCCCTCCTCGTGCTTCAGCCGTCCCTTCTCG
CTGTTGAATCGTTTGCCGCATATTTTGCACGGGTGCACCAGCTCGTTGGC
ATGCATTTGACGTTCATGACGACAGCGGCTGGGACTATTGGCGAATCCCA
TACCGCAGAACTTGCAGACGTACGGTTTCTCGCCCTTGTGATGGACTCGA
ATGTGCAATCGGAGCAGTGGCATGGTGTAGAACTTGCGACCGCACTCGTC
GCATGAAAACTTCTCCTCGAAGTGCCGCAGCTTGTGATCCTTCATGTTGC
TGTGATCGTTGAACGACCAACCGCACTGGTCGCACACGTATCGCTTTATC
GAGCGATCGACCTTGGGTTTTGGTCGCCGCTTTCTGGGCTTTCGGACGTG
CTCCCGCGGAGGTGGCGGTGGACTATCTGCCTTCTCGACCACAGGCACAC
GAAGCCGCTTGACCCTGACTCGTGGGGACTGTCTGTTCGGGAAATTTTGG
TCCTCGATCCGGAATTTTTTGGG
BO01131.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:33:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7357-PA | 1293 | CG7357-RA | 437..1290 | 872..19 | 4245 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:19:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7357-RA | 1645 | CG7357-RA | 542..1395 | 872..19 | 4255 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:19:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17808216..17808627 | 461..872 | 2045 | 99.8 | Plus |
| 3R | 32079331 | 3R | 17807657..17807978 | 19..340 | 1610 | 100 | Plus |
| 3R | 32079331 | 3R | 17808036..17808156 | 341..461 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:19:21 has no hits.
BO01131.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:24:00 Download gff for
BO01131.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-PA | 436..1293 | 15..873 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:18:35 Download gff for
BO01131.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-PA | 436..1293 | 15..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 02:33:13 Download gff for
BO01131.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 541..1405 | 6..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:14:05 Download gff for
BO01131.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 541..1405 | 6..873 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:14:05 Download gff for
BO01131.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17807647..17807978 | 6..340 | 98 | <- | Plus |
| 3R | 17808036..17808155 | 341..460 | 100 | <- | Plus |
| 3R | 17808216..17808627 | 461..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 02:33:13 Download gff for
BO01131.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13633369..13633700 | 6..340 | 98 | <- | Plus |
| arm_3R | 13633758..13633877 | 341..460 | 100 | <- | Plus |
| arm_3R | 13633938..13634349 | 461..873 | 99 | | Plus |
BO01131.5prime Sequence
808 bp (806 high quality bases) assembled on 2005-11-30
> BO01131.5prime
GAAGTTATCAGTCGACATGAGCACCGAGTGTCGGATCTGCGGCGAGCGCA
TCTTCACGCCGCACCCAAAGAACATCTTCGAGAAGCGCAATCATCGCATT
CGGATGGCCATCGAGCAAATCACGGGCTTAGAGATCGTTTTAGAGAATAT
GCTGCCCCAGCACATATGCGCTTGTTGTCTCCTGGACCTGACCCAAGCCG
TAGCCTTCAGGCAGCGATGCCTGGAGACGCACGCAAATCTCCACCAGAGG
ATCTCCTCGAAGGCGGGTGTCGCCTCAAAAGGCTCCCCGGAGGTTTCGCC
AGTGCTTAGTGATCCGCTGCTGAAACGGGAGGTGCTGGATGATACAGTAG
ACACCGAGGACGATAAGGAGCTACTGGACGATGATAAGGATTTAATGGAT
GATGATAAGGATTTCTTGGAGGACGAAAAGCCGATTTTAAGATATCCTCC
GGCCAAAAAAATCCGGATCGAGGACCAAAATTTCCCGAACAGACAGTCCC
CACGAGTCAGGGTCAAGCGGCTTCGTGTGCCTGTGGTCGAGAAGGCAGAT
AGTCCACCGCCACCTCCGCGGGAGCACGTCCGAAAGCCCAGAAAGCGGCG
ACCAAAACCCAAGGTCGATCGCTCGATAAAGCGATACGTGTGCGACCAGT
GCGGTTGGTCGTTCAACGATCACAGCAACATGAAGGATCACAAGCTGCGG
CACTTCGAGGAGAAGTTTTCATGCGACGAGTGCGGTCGCAAGTTCTACAC
CATGCCACTGCTCCGATTGCACATTCGAGTCCATCACAAGGGCGAGAAAC
CGTACGTC
BO01131.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:33:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7357-PA | 1293 | CG7357-RA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:32:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7357-RA | 1645 | CG7357-RA | 106..897 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:32:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17808272..17808948 | 808..132 | 3385 | 100 | Minus |
| 3R | 32079331 | 3R | 17809001..17809117 | 133..17 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:32:55 has no hits.
BO01131.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:24:01 Download gff for
BO01131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-PA | 1..792 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:18:36 Download gff for
BO01131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-PA | 1..792 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:47:14 Download gff for
BO01131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 104..897 | 14..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:12:48 Download gff for
BO01131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 104..897 | 14..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:12:48 Download gff for
BO01131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17808272..17808946 | 134..808 | 100 | <- | Minus |
| 3R | 17809001..17809119 | 14..133 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:47:14 Download gff for
BO01131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13633994..13634668 | 134..808 | 100 | <- | Minus |
| arm_3R | 13634723..13634841 | 14..133 | 99 | | Minus |
BO01131.complete Sequence
1324 bp (1324 high quality bases) assembled on 2005-06-23
GenBank Submission: KX798593
> BO01131.complete
GAAGTTATCAGTCGACATGAGCACCGAGTGTCGGATCTGCGGCGAGCGCA
TCTTCACGCCGCACCCAAAGAACATCTTCGAGAAGCGCAATCATCGCATT
CGGATGGCCATCGAGCAAATCACGGGCTTAGAGATCGTTTTAGAGAATAT
GCTGCCCCAGCACATATGCGCTTGTTGTCTCCTGGACCTGACCCAAGCCG
TAGCCTTCAGGCAGCGATGCCTGGAGACGCACGCAAATCTCCACCAGAGG
ATCTCCTCGAAGGCGGGTGTCGCCTCAAAAGGCTCCCCGGAGGTTTCGCC
AGTGCTTAGTGATCCGCTGCTGAAACGGGAGGTGCTGGATGATACAGTAG
ACACCGAGGACGATAAGGAGCTACTGGACGATGATAAGGATTTAATGGAT
GATGATAAGGATTTCTTGGAGGACGAAAAGCCGATTTTAAGATATCCTCC
GGCCAAAAAAATCCGGATCGAGGACCAAAATTTCCCGAACAGACAGTCCC
CACGAGTCAGGGTCAAGCGGCTTCGTGTGCCTGTGGTCGAGAAGGCAGAT
AGTCCACCGCCACCTCCGCGGGAGCACGTCCGAAAGCCCAGAAAGCGGCG
ACCAAAACCCAAGGTCGATCGCTCGATAAAGCGATACGTGTGCGACCAGT
GCGGTTGGTCGTTCAACGATCACAGCAACATGAAGGATCACAAGCTGCGG
CACTTCGAGGAGAAGTTTTCATGCGACGAGTGCGGTCGCAAGTTCTACAC
CATGCCACTGCTCCGATTGCACATTCGAGTCCATCACAAGGGCGAGAAAC
CGTACGTCTGCAAGTTCTGCGGTATGGGATTCGCCAATAGTCCCAGCCGC
TGTCGTCATGAACGTCAAATGCATGCCAACGAGCTGGTGCACCCGTGCAA
AATATGCGGCAAACGATTCAACAGCGAGAAGGGACGGCTGAAGCACGAGG
AGGGGCACAAGAGTGACCAACCGGATGTCCATATCTGCCTCACATGCAAC
AAGGAGTTCAAGGAGGCGCAGTTTTTGCATCGGCACTACTCCACAAAGTA
TCACCGCAAGCGGGTCAACTTGCTGGTTAATGGTCCAAAAGAGGAATTCC
AGTCTGAAGTCGATCCGGCGGAGTTTCCGGGATATATGGAAGAGGGGCAG
GCAGAAATGGAGGACAACCAGGCTGAACTGGACGTAATGTTAGATAACAT
TGACGAGGAACAATATGAGGACCACGAGGTACTTCAGGATGAGGACGCAA
ATTTTGAGGACTTCGAGTACGAGGAAGCCATTCCCGATGGAGAGGAGCTG
TACACCGCAAGCTTTCTAGACCAT
BO01131.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:42:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7357-RA | 1293 | CG7357-PA | 1..1290 | 17..1306 | 6450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:42:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7357-RA | 1645 | CG7357-RA | 106..1395 | 17..1306 | 6450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:42:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17808216..17808948 | 864..132 | 3665 | 100 | Minus |
| 3R | 32079331 | 3R | 17807657..17807978 | 1306..985 | 1610 | 100 | Minus |
| 3R | 32079331 | 3R | 17808036..17808156 | 984..864 | 605 | 100 | Minus |
| 3R | 32079331 | 3R | 17809001..17809117 | 133..17 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:42:40 has no hits.
BO01131.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:46:56 Download gff for
BO01131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 1..1293 | 17..1310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:17:45 Download gff for
BO01131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 106..1407 | 14..1319 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:15 Download gff for
BO01131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 106..1395 | 17..1308 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:46:56 Download gff for
BO01131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 106..1407 | 14..1319 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:47 Download gff for
BO01131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7357-RA | 106..1395 | 17..1308 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:47 Download gff for
BO01131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17807655..17807978 | 985..1308 | 99 | <- | Minus |
| 3R | 17808036..17808155 | 865..984 | 100 | <- | Minus |
| 3R | 17808216..17808946 | 134..864 | 100 | <- | Minus |
| 3R | 17809001..17809117 | 17..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:15 Download gff for
BO01131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13633758..13633877 | 865..984 | 100 | <- | Minus |
| arm_3R | 13633377..13633700 | 985..1308 | 99 | <- | Minus |
| arm_3R | 13633938..13634668 | 134..864 | 100 | <- | Minus |
| arm_3R | 13634723..13634839 | 17..133 | 100 | | Minus |
BO01131.pep Sequence
Translation from 16 to 1324
> BO01131.pep
MSTECRICGERIFTPHPKNIFEKRNHRIRMAIEQITGLEIVLENMLPQHI
CACCLLDLTQAVAFRQRCLETHANLHQRISSKAGVASKGSPEVSPVLSDP
LLKREVLDDTVDTEDDKELLDDDKDLMDDDKDFLEDEKPILRYPPAKKIR
IEDQNFPNRQSPRVRVKRLRVPVVEKADSPPPPPREHVRKPRKRRPKPKV
DRSIKRYVCDQCGWSFNDHSNMKDHKLRHFEEKFSCDECGRKFYTMPLLR
LHIRVHHKGEKPYVCKFCGMGFANSPSRCRHERQMHANELVHPCKICGKR
FNSEKGRLKHEEGHKSDQPDVHICLTCNKEFKEAQFLHRHYSTKYHRKRV
NLLVNGPKEEFQSEVDPAEFPGYMEEGQAEMEDNQAELDVMLDNIDEEQY
EDHEVLQDEDANFEDFEYEEAIPDGEELYTASFLDH
BO01131.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:29:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7357-PA | 430 | CG7357-PA | 1..430 | 1..430 | 2344 | 100 | Plus |
| CG18764-PA | 409 | CG18764-PA | 1..402 | 1..353 | 362 | 27.1 | Plus |
| CG31441-PA | 341 | CG31441-PA | 8..334 | 5..349 | 347 | 29.9 | Plus |
| CG1792-PA | 372 | CG1792-PA | 6..333 | 5..346 | 340 | 30.5 | Plus |
| CG17801-PB | 381 | CG17801-PB | 8..376 | 3..354 | 331 | 26.4 | Plus |
