Clone Sequence Records
BO01205.3prime Sequence
887 bp (794 high quality bases) assembled on 2005-11-30
> BO01205.3prime
ATGGTCTAGAAAGCTTGCGACGGAAATCGGCGCATTCGTGGCCGCCGGCG
ATTGCTGTTGCGGCTGCTGTTGGTGGTGCTGATGGTGATGATGGTGGTGG
TGACCCATGTGGTGATGACCCAGATGATGGTGCTGCTCCTGATGGTGGTG
GCTCAGGGTCAGATGATGATGCTGCTCCTGCTGGTGTTGCTGCTGCAGCT
GGTGATGGTGGTTGTATTGCTGGTGCTGTGTCTTCAGCAGCATGGAGCGG
TACATTTCGGAGAGGAGACTCCACATGGGCGGCGAGTCCTTGGCCAGATC
CACGGGTGATCCCGCCGGCAGGAAGGCGGTGGGCGGTGCCTGGCTGGTGG
CAGCGGCAGCCGCTGCGGCGGCAAACATCTGGGTCTGCAGCAGGCGCAGA
TGATGATGCTCCTCGAGGTCCAGAACGGGCAGTGGGAGCATTTGCCGCCG
GCTGGTCATGTAGGCACTGTCGCTATCCGGGTCCAGATCCATTTTGATGC
TCGTCTGTGGTGGATTGGCGCTAGCGCTGGCGGAGGAACTAGAGGCGGAG
GAGGCGGCTGCCGTGGAACAGGCGGAGCTGGAGGCGGTGCTGTCGTGACG
CTTACGCTTGCCCAGCAACTGATCCATGGAGAAGGCATCGCTGGGCGAGC
GCTTCTCACGCTCCAGCTCATGCTCCTGTTCGGGTTCGTGCTCCTTGTCG
GATTCCACATCCTGTTCCTGCTCCTTTTCCGCCTCCCGCTCCCGTTCCTG
CTCCTGCTCCTGCTCCTGTTCCCGATCCTGCTCCGACTTGCGACGCTTGT
GAAGGCTGAAATCCAATGGCTGGTCAGCTGCCCGCTCCTCATCGGGCGGC
ATGCTACTACTGCTGGCCAGGCTCAAGCTGCAGTGCA
BO01205.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:34:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9908-PA | 1707 | disco-RA | 878..1704 | 845..19 | 4135 | 100 | Minus |
CG9908-PB | 1707 | disco-RB | 878..1704 | 845..19 | 4135 | 100 | Minus |
CG9908-PA | 1707 | disco-RA | 836..872 | 887..851 | 185 | 100 | Minus |
CG9908-PB | 1707 | disco-RB | 836..872 | 887..851 | 185 | 100 | Minus |
CG15470-PA | 1038 | CG15470-RA | 715..749 | 204..170 | 150 | 97.1 | Minus |
CG15772-PA | 780 | CG15772-RA | 250..287 | 204..167 | 140 | 94.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:05:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
disco-RB | 3067 | CG9908-RB | 1398..2266 | 887..19 | 4300 | 99.8 | Minus |
disco-RA | 3247 | CG9908-RA | 1402..2270 | 887..19 | 4300 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:05:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16211575..16212443 | 19..887 | 4285 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:05:11 has no hits.
BO01205.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:25:46 Download gff for
BO01205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9908-PA | 837..1707 | 15..886 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:21:13 Download gff for
BO01205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9908-PB | 837..1707 | 15..886 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:28:49 Download gff for
BO01205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RA | 1398..2268 | 15..886 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:56:14 Download gff for
BO01205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RA | 1403..2273 | 15..886 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:56:14 Download gff for
BO01205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16211572..16212442 | 15..886 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:28:49 Download gff for
BO01205.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16105605..16106475 | 15..886 | 99 | | Plus |
BO01205.5prime Sequence
887 bp (667 high quality bases) assembled on 2005-11-30
> BO01205.5prime
GAAGTTATCAGTCGACATGGAGCACATAATGAATCCGTTCATGTCACCGG
CTTATCTGCTGGGCCATGGCCCACATTCCCACCAGCATGTGCACTCCCAT
CTACCGTCACACCCGCAGCCAAATGCCGCCTCTCCGGCCAGCTCACCCGG
CGGATCCAGTGGCTCTGGATCGGGATCGGCAGCGGGATCGGGCACTGGAT
CAGGTTCATCCTTAAAGCCTCGTCGCTGGGGCTCACCGCCCATCAATCTG
GCCGGTCAGTTTATCAATCCAGCCACGGGAAAGAAACGAGTACAGTGCTC
CATTTGCTTCAAGACCTTCTGCGACAAGGGCGCCCTTAAGATTCACTTTT
CGGCCGTGCATCTTCGCGAGATGCACAAGTGCACGGTGGAGGGCTGCAAT
ATGGTGTTCAGTTCGAGGCGTTCGAGGAATCGCCATAGCGCCAATCCGAA
TCCCAAACTCCATTCGCCACACATCCGGCGCAAGATCTCGCCGCACGATG
GCCGCACTGCCCAGCAGTTTCCGGTTTTCTCGCCCGGAACAGCCGCAGCA
GCGGCCGCTGTCGCCGGACGACTTCCGGTTGCCTTTCCCGGACTTCTGCC
ACCGCCGCCGCCGCATCATGGTCACCATCCGTACGTCATGTTCGGCGGAC
AGGCGGGTCTACATGGCTTGGGCCTGCTTTCCACCGGCTGTCAGGATCCC
GATTCTGGATCGGTGGACAATGAACAGGATGCTGATCCCGAAGATGACAA
CGACTTTGTGTACGTGGACATGCANGCCAATAGCTCTAGTCCGGCGGCCT
CCAGCGAGGATCANGAGGAACACGAACGGGATAATGAGCAGGATGAGGAG
ATGCACTGCAGCTTGAGCCTGGCCAGCAGTAGTAGCA
BO01205.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:34:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9908-PA | 1707 | disco-RA | 1..871 | 17..887 | 4317 | 99.7 | Plus |
CG9908-PB | 1707 | disco-RB | 1..871 | 17..887 | 4317 | 99.7 | Plus |
CG32577-PA | 3936 | disco-r-RA | 1546..1601 | 413..468 | 205 | 94.6 | Plus |
CG32577-PA | 3936 | disco-r-RA | 1444..1496 | 311..363 | 140 | 90.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:43:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
disco-RB | 3067 | CG9908-RB | 555..1433 | 9..887 | 4358 | 99.7 | Plus |
disco-RA | 3247 | CG9908-RA | 559..1437 | 9..887 | 4358 | 99.7 | Plus |
disco-r-RD | 4485 | CG32577-RD | 1676..1929 | 257..510 | 655 | 83.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:43:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16212408..16213286 | 887..9 | 4358 | 99.7 | Minus |
X | 23542271 | X | 16121552..16121805 | 510..257 | 655 | 83.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:43:22 has no hits.
BO01205.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:25:47 Download gff for
BO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9908-PA | 1..870 | 17..886 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:21:15 Download gff for
BO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9908-PB | 1..870 | 17..886 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:32:12 Download gff for
BO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RA | 554..1431 | 9..886 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:16:11 Download gff for
BO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RA | 559..1436 | 9..886 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:16:11 Download gff for
BO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16212409..16213286 | 9..886 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:32:12 Download gff for
BO01205.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16106442..16107319 | 9..886 | 99 | | Minus |
BO01205.complete Sequence
1738 bp (1738 high quality bases) assembled on 2008-08-14
GenBank Submission: FJ629450
> BO01205.complete
GAAGTTATCAGTCGACATGGAGCACATAATGAATCCGTTCATGTCACCGG
CTTATCTGCTGGGCCATGGCCCACATTCCCACCAGCATGTGCACTCCCAT
CTACCGTCACACCCGCAGCCAAATGCCGCCTCTCCGGCCAGCTCACCCGG
CGGATCCAGTGGCTCTGGATCGGGATCGGCAGCGGGATCGGGCACTGGAT
CAGGTTCATCCTTAAAGCCTCGTCGCTGGGGCTCACCGCCCATCAATCTG
GCCGGTCAGTTTATCAATCCAGCCACGGGAAAGAAACGAGTACAGTGCTC
CATTTGCTTCAAGACCTTCTGCGACAAGGGCGCCCTTAAGATTCACTTTT
CGGCCGTGCATCTTCGCGAGATGCACAAGTGCACGGTGGAGGGCTGCAAT
ATGGTGTTCAGTTCGAGGCGTTCGAGGAATCGCCATAGCGCCAATCCGAA
TCCCAAACTCCATTCGCCACACATCCGGCGCAAGATCTCGCCGCACGATG
GCCGCACTGCCCAGCAGTTTCCGGTTTTCTCGCCCGGAACAGCCGCAGCA
GCGGCCGCTGTCGCCGGACGACTTCCGGTTGCCTTTCCCGGACTTCTGCC
ACCGCCGCCGCCGCATCATGGTCACCATCCGTACGTCATGTTCGGCGGAC
AGGCGGGTCTACATGGCTTGGGCCTGCTTTCCACCGGCTGTCAGGATCCC
GATTCTGGATCGGTGGACAATGAACAGGATGCTGATCCCGAAGATGACAA
CGACTTTGTGTACGTGGACATGCAGGCCAATAGCTCTAGTCCGGCGGCCT
CCAGCGAGGATCAGGAGGAACACGAACGGGATAATGAGCAGGATGAGGAG
ATGCACTGCAGCTTGAGCCTGGCCAGCAGTAGTAGCATTGCCGCCGATGA
GGAGCGGGCAGCTGACCAGCCATTGGATTTCAGCCTTCACAAGCGTCGCA
AGTCGGAGCAGGATCGGGAACAGGAGCAGGAGCAGGAGCAGGAACGGGAG
CGGGAGGCGGAAAAGGAGCAGGAACAGGATGTGGAATCCGACAAGGAGCA
CGAACCCGAACAGGAGCATGAGCTGGAGCGTGAGAAGCGCTCGCCCAGCG
ATGCCTTCTCCATGGATCAGTTGCTGGGCAAGCGTAAGCGTCACGACAGC
ACCGCCTCCAGCTCCGCCTGTTCCACGGCAGCCGCCTCCTCCGCCTCTAG
TTCCTCCGCCAGCGCTAGCGCCAATCCACCACAGACGAGCATCAAAATGG
ATCTGGACCCGGATAGCGACAGTGCCTACATGACCAGCCGGCGGCAAATG
CTCCCACTGCCCGTTCTGGACCTCGAGGAGCATCATCATCTGCGCCTGCT
GCAGACCCAGATGTTTGCCGCCGCAGCGGCTGCCGCTGCCACCAGCCAGG
CACCGCCCACCGCCTTCCTGCCGGCGGGATCACCCGTGGATCTGGCCAAG
GACTCGCCGCCCATGTGGAGTCTCCTCTCCGAAATGTACCGCTCCATGCT
GCTGAAGACACAGCACCAGCAATACAACCACCATCACCAGCTGCAGCAGC
AACACCAGCAGGAGCAGCATCATCATCTGACCCTGAGCCACCACCATCAG
GAGCAGCACCATCATCTGGGTCATCACCACATGGGTCACCACCACCATCA
TCACCATCAGCACCACCAACAGCAGCCGCAACAGCAATCGCCGGCGGCCA
CGAATGCGCCGATTTCCGTCGCAAGCTTTCTAGACCAT
BO01205.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:12:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
disco-RB | 1707 | CG9908-PB | 1..1704 | 17..1720 | 8520 | 100 | Plus |
disco-RA | 1707 | CG9908-PA | 1..1704 | 17..1720 | 8520 | 100 | Plus |
disco-r-RD | 3936 | CG32577-PD | 1390..1643 | 257..510 | 655 | 83.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:12:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
disco-RB | 3067 | CG9908-RB | 555..2266 | 9..1720 | 8545 | 99.9 | Plus |
disco-RA | 3247 | CG9908-RA | 559..2270 | 9..1720 | 8545 | 99.9 | Plus |
disco-r-RD | 4485 | CG32577-RD | 1676..1929 | 257..510 | 655 | 83.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:12:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16211575..16213286 | 1720..9 | 8545 | 99.9 | Minus |
X | 23542271 | X | 16121552..16121805 | 510..257 | 655 | 83.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:12:43 has no hits.
BO01205.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:48:09 Download gff for
BO01205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RB | 1..1707 | 17..1724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:36:17 Download gff for
BO01205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RB | 515..2229 | 9..1724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:20:00 Download gff for
BO01205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RA | 562..2265 | 17..1722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:48:09 Download gff for
BO01205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RB | 515..2229 | 9..1724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:01 Download gff for
BO01205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
disco-RA | 567..2270 | 17..1722 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:01 Download gff for
BO01205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16211573..16213278 | 17..1722 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:20:00 Download gff for
BO01205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16105606..16107311 | 17..1722 | 99 | | Minus |
BO01205.pep Sequence
Translation from 16 to 1738
> BO01205.pep
MEHIMNPFMSPAYLLGHGPHSHQHVHSHLPSHPQPNAASPASSPGGSSGS
GSGSAAGSGTGSGSSLKPRRWGSPPINLAGQFINPATGKKRVQCSICFKT
FCDKGALKIHFSAVHLREMHKCTVEGCNMVFSSRRSRNRHSANPNPKLHS
PHIRRKISPHDGRTAQQFPVFSPGTAAAAAAVAGRLPVAFPGLLPPPPPH
HGHHPYVMFGGQAGLHGLGLLSTGCQDPDSGSVDNEQDADPEDDNDFVYV
DMQANSSSPAASSEDQEEHERDNEQDEEMHCSLSLASSSSIAADEERAAD
QPLDFSLHKRRKSEQDREQEQEQEQEREREAEKEQEQDVESDKEHEPEQE
HELEREKRSPSDAFSMDQLLGKRKRHDSTASSSACSTAAASSASSSSASA
SANPPQTSIKMDLDPDSDSAYMTSRRQMLPLPVLDLEEHHHLRLLQTQMF
AAAAAAAATSQAPPTAFLPAGSPVDLAKDSPPMWSLLSEMYRSMLLKTQH
QQYNHHHQLQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHHHHHQHH
QQQPQQQSPAATNAPISVASFLDH
BO01205.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:20:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
disco-PB | 568 | CG9908-PB | 1..568 | 1..568 | 3050 | 100 | Plus |
disco-PA | 568 | CG9908-PA | 1..568 | 1..568 | 3050 | 100 | Plus |
disco-r-PD | 1311 | CG32577-PD | 432..855 | 43..517 | 602 | 34.4 | Plus |
disco-r-PC | 1311 | CG32577-PC | 432..855 | 43..517 | 602 | 34.4 | Plus |
disco-r-PB | 1311 | CG32577-PB | 432..855 | 43..517 | 602 | 34.4 | Plus |