Clone BO01205 Report

Search the DGRC for BO01205

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:12
Well:5
Vector:pDNR-Dual
Associated Gene/Transcriptdisco-RA
Protein status:BO01205.pep: Imported from assembly
Sequenced Size:1738

Clone Sequence Records

BO01205.3prime Sequence

887 bp (794 high quality bases) assembled on 2005-11-30

> BO01205.3prime
ATGGTCTAGAAAGCTTGCGACGGAAATCGGCGCATTCGTGGCCGCCGGCG
ATTGCTGTTGCGGCTGCTGTTGGTGGTGCTGATGGTGATGATGGTGGTGG
TGACCCATGTGGTGATGACCCAGATGATGGTGCTGCTCCTGATGGTGGTG
GCTCAGGGTCAGATGATGATGCTGCTCCTGCTGGTGTTGCTGCTGCAGCT
GGTGATGGTGGTTGTATTGCTGGTGCTGTGTCTTCAGCAGCATGGAGCGG
TACATTTCGGAGAGGAGACTCCACATGGGCGGCGAGTCCTTGGCCAGATC
CACGGGTGATCCCGCCGGCAGGAAGGCGGTGGGCGGTGCCTGGCTGGTGG
CAGCGGCAGCCGCTGCGGCGGCAAACATCTGGGTCTGCAGCAGGCGCAGA
TGATGATGCTCCTCGAGGTCCAGAACGGGCAGTGGGAGCATTTGCCGCCG
GCTGGTCATGTAGGCACTGTCGCTATCCGGGTCCAGATCCATTTTGATGC
TCGTCTGTGGTGGATTGGCGCTAGCGCTGGCGGAGGAACTAGAGGCGGAG
GAGGCGGCTGCCGTGGAACAGGCGGAGCTGGAGGCGGTGCTGTCGTGACG
CTTACGCTTGCCCAGCAACTGATCCATGGAGAAGGCATCGCTGGGCGAGC
GCTTCTCACGCTCCAGCTCATGCTCCTGTTCGGGTTCGTGCTCCTTGTCG
GATTCCACATCCTGTTCCTGCTCCTTTTCCGCCTCCCGCTCCCGTTCCTG
CTCCTGCTCCTGCTCCTGTTCCCGATCCTGCTCCGACTTGCGACGCTTGT
GAAGGCTGAAATCCAATGGCTGGTCAGCTGCCCGCTCCTCATCGGGCGGC
ATGCTACTACTGCTGGCCAGGCTCAAGCTGCAGTGCA

BO01205.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG9908-PA 1707 disco-RA 878..1704 845..19 4135 100 Minus
CG9908-PB 1707 disco-RB 878..1704 845..19 4135 100 Minus
CG9908-PA 1707 disco-RA 836..872 887..851 185 100 Minus
CG9908-PB 1707 disco-RB 836..872 887..851 185 100 Minus
CG15470-PA 1038 CG15470-RA 715..749 204..170 150 97.1 Minus
CG15772-PA 780 CG15772-RA 250..287 204..167 140 94.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
disco-RB 3067 CG9908-RB 1398..2266 887..19 4300 99.8 Minus
disco-RA 3247 CG9908-RA 1402..2270 887..19 4300 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16211575..16212443 19..887 4285 99.5 Plus
Blast to na_te.dros performed on 2015-02-13 01:05:11 has no hits.

BO01205.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:25:46 Download gff for BO01205.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9908-PA 837..1707 15..886 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:21:13 Download gff for BO01205.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9908-PB 837..1707 15..886 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:28:49 Download gff for BO01205.3prime
Subject Subject Range Query Range Percent Splice Strand
disco-RA 1398..2268 15..886 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:56:14 Download gff for BO01205.3prime
Subject Subject Range Query Range Percent Splice Strand
disco-RA 1403..2273 15..886 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:56:14 Download gff for BO01205.3prime
Subject Subject Range Query Range Percent Splice Strand
X 16211572..16212442 15..886 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:28:49 Download gff for BO01205.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16105605..16106475 15..886 99   Plus

BO01205.5prime Sequence

887 bp (667 high quality bases) assembled on 2005-11-30

> BO01205.5prime
GAAGTTATCAGTCGACATGGAGCACATAATGAATCCGTTCATGTCACCGG
CTTATCTGCTGGGCCATGGCCCACATTCCCACCAGCATGTGCACTCCCAT
CTACCGTCACACCCGCAGCCAAATGCCGCCTCTCCGGCCAGCTCACCCGG
CGGATCCAGTGGCTCTGGATCGGGATCGGCAGCGGGATCGGGCACTGGAT
CAGGTTCATCCTTAAAGCCTCGTCGCTGGGGCTCACCGCCCATCAATCTG
GCCGGTCAGTTTATCAATCCAGCCACGGGAAAGAAACGAGTACAGTGCTC
CATTTGCTTCAAGACCTTCTGCGACAAGGGCGCCCTTAAGATTCACTTTT
CGGCCGTGCATCTTCGCGAGATGCACAAGTGCACGGTGGAGGGCTGCAAT
ATGGTGTTCAGTTCGAGGCGTTCGAGGAATCGCCATAGCGCCAATCCGAA
TCCCAAACTCCATTCGCCACACATCCGGCGCAAGATCTCGCCGCACGATG
GCCGCACTGCCCAGCAGTTTCCGGTTTTCTCGCCCGGAACAGCCGCAGCA
GCGGCCGCTGTCGCCGGACGACTTCCGGTTGCCTTTCCCGGACTTCTGCC
ACCGCCGCCGCCGCATCATGGTCACCATCCGTACGTCATGTTCGGCGGAC
AGGCGGGTCTACATGGCTTGGGCCTGCTTTCCACCGGCTGTCAGGATCCC
GATTCTGGATCGGTGGACAATGAACAGGATGCTGATCCCGAAGATGACAA
CGACTTTGTGTACGTGGACATGCANGCCAATAGCTCTAGTCCGGCGGCCT
CCAGCGAGGATCANGAGGAACACGAACGGGATAATGAGCAGGATGAGGAG
ATGCACTGCAGCTTGAGCCTGGCCAGCAGTAGTAGCA

BO01205.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG9908-PA 1707 disco-RA 1..871 17..887 4317 99.7 Plus
CG9908-PB 1707 disco-RB 1..871 17..887 4317 99.7 Plus
CG32577-PA 3936 disco-r-RA 1546..1601 413..468 205 94.6 Plus
CG32577-PA 3936 disco-r-RA 1444..1496 311..363 140 90.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:43:24
Subject Length Description Subject Range Query Range Score Percent Strand
disco-RB 3067 CG9908-RB 555..1433 9..887 4358 99.7 Plus
disco-RA 3247 CG9908-RA 559..1437 9..887 4358 99.7 Plus
disco-r-RD 4485 CG32577-RD 1676..1929 257..510 655 83.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16212408..16213286 887..9 4358 99.7 Minus
X 23542271 X 16121552..16121805 510..257 655 83.9 Minus
Blast to na_te.dros performed on 2015-02-12 00:43:22 has no hits.

BO01205.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:25:47 Download gff for BO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9908-PA 1..870 17..886 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:21:15 Download gff for BO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9908-PB 1..870 17..886 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:32:12 Download gff for BO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
disco-RA 554..1431 9..886 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:16:11 Download gff for BO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
disco-RA 559..1436 9..886 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:16:11 Download gff for BO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
X 16212409..16213286 9..886 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:32:12 Download gff for BO01205.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16106442..16107319 9..886 99   Minus

BO01205.complete Sequence

1738 bp (1738 high quality bases) assembled on 2008-08-14

GenBank Submission: FJ629450

> BO01205.complete
GAAGTTATCAGTCGACATGGAGCACATAATGAATCCGTTCATGTCACCGG
CTTATCTGCTGGGCCATGGCCCACATTCCCACCAGCATGTGCACTCCCAT
CTACCGTCACACCCGCAGCCAAATGCCGCCTCTCCGGCCAGCTCACCCGG
CGGATCCAGTGGCTCTGGATCGGGATCGGCAGCGGGATCGGGCACTGGAT
CAGGTTCATCCTTAAAGCCTCGTCGCTGGGGCTCACCGCCCATCAATCTG
GCCGGTCAGTTTATCAATCCAGCCACGGGAAAGAAACGAGTACAGTGCTC
CATTTGCTTCAAGACCTTCTGCGACAAGGGCGCCCTTAAGATTCACTTTT
CGGCCGTGCATCTTCGCGAGATGCACAAGTGCACGGTGGAGGGCTGCAAT
ATGGTGTTCAGTTCGAGGCGTTCGAGGAATCGCCATAGCGCCAATCCGAA
TCCCAAACTCCATTCGCCACACATCCGGCGCAAGATCTCGCCGCACGATG
GCCGCACTGCCCAGCAGTTTCCGGTTTTCTCGCCCGGAACAGCCGCAGCA
GCGGCCGCTGTCGCCGGACGACTTCCGGTTGCCTTTCCCGGACTTCTGCC
ACCGCCGCCGCCGCATCATGGTCACCATCCGTACGTCATGTTCGGCGGAC
AGGCGGGTCTACATGGCTTGGGCCTGCTTTCCACCGGCTGTCAGGATCCC
GATTCTGGATCGGTGGACAATGAACAGGATGCTGATCCCGAAGATGACAA
CGACTTTGTGTACGTGGACATGCAGGCCAATAGCTCTAGTCCGGCGGCCT
CCAGCGAGGATCAGGAGGAACACGAACGGGATAATGAGCAGGATGAGGAG
ATGCACTGCAGCTTGAGCCTGGCCAGCAGTAGTAGCATTGCCGCCGATGA
GGAGCGGGCAGCTGACCAGCCATTGGATTTCAGCCTTCACAAGCGTCGCA
AGTCGGAGCAGGATCGGGAACAGGAGCAGGAGCAGGAGCAGGAACGGGAG
CGGGAGGCGGAAAAGGAGCAGGAACAGGATGTGGAATCCGACAAGGAGCA
CGAACCCGAACAGGAGCATGAGCTGGAGCGTGAGAAGCGCTCGCCCAGCG
ATGCCTTCTCCATGGATCAGTTGCTGGGCAAGCGTAAGCGTCACGACAGC
ACCGCCTCCAGCTCCGCCTGTTCCACGGCAGCCGCCTCCTCCGCCTCTAG
TTCCTCCGCCAGCGCTAGCGCCAATCCACCACAGACGAGCATCAAAATGG
ATCTGGACCCGGATAGCGACAGTGCCTACATGACCAGCCGGCGGCAAATG
CTCCCACTGCCCGTTCTGGACCTCGAGGAGCATCATCATCTGCGCCTGCT
GCAGACCCAGATGTTTGCCGCCGCAGCGGCTGCCGCTGCCACCAGCCAGG
CACCGCCCACCGCCTTCCTGCCGGCGGGATCACCCGTGGATCTGGCCAAG
GACTCGCCGCCCATGTGGAGTCTCCTCTCCGAAATGTACCGCTCCATGCT
GCTGAAGACACAGCACCAGCAATACAACCACCATCACCAGCTGCAGCAGC
AACACCAGCAGGAGCAGCATCATCATCTGACCCTGAGCCACCACCATCAG
GAGCAGCACCATCATCTGGGTCATCACCACATGGGTCACCACCACCATCA
TCACCATCAGCACCACCAACAGCAGCCGCAACAGCAATCGCCGGCGGCCA
CGAATGCGCCGATTTCCGTCGCAAGCTTTCTAGACCAT

BO01205.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:12:45
Subject Length Description Subject Range Query Range Score Percent Strand
disco-RB 1707 CG9908-PB 1..1704 17..1720 8520 100 Plus
disco-RA 1707 CG9908-PA 1..1704 17..1720 8520 100 Plus
disco-r-RD 3936 CG32577-PD 1390..1643 257..510 655 83.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:12:46
Subject Length Description Subject Range Query Range Score Percent Strand
disco-RB 3067 CG9908-RB 555..2266 9..1720 8545 99.9 Plus
disco-RA 3247 CG9908-RA 559..2270 9..1720 8545 99.9 Plus
disco-r-RD 4485 CG32577-RD 1676..1929 257..510 655 83.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:12:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16211575..16213286 1720..9 8545 99.9 Minus
X 23542271 X 16121552..16121805 510..257 655 83.9 Minus
Blast to na_te.dros performed on 2014-11-28 00:12:43 has no hits.

BO01205.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:48:09 Download gff for BO01205.complete
Subject Subject Range Query Range Percent Splice Strand
disco-RB 1..1707 17..1724 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:36:17 Download gff for BO01205.complete
Subject Subject Range Query Range Percent Splice Strand
disco-RB 515..2229 9..1724 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:20:00 Download gff for BO01205.complete
Subject Subject Range Query Range Percent Splice Strand
disco-RA 562..2265 17..1722 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:48:09 Download gff for BO01205.complete
Subject Subject Range Query Range Percent Splice Strand
disco-RB 515..2229 9..1724 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:01 Download gff for BO01205.complete
Subject Subject Range Query Range Percent Splice Strand
disco-RA 567..2270 17..1722 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:01 Download gff for BO01205.complete
Subject Subject Range Query Range Percent Splice Strand
X 16211573..16213278 17..1722 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:20:00 Download gff for BO01205.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16105606..16107311 17..1722 99   Minus

BO01205.pep Sequence

Translation from 16 to 1738

> BO01205.pep
MEHIMNPFMSPAYLLGHGPHSHQHVHSHLPSHPQPNAASPASSPGGSSGS
GSGSAAGSGTGSGSSLKPRRWGSPPINLAGQFINPATGKKRVQCSICFKT
FCDKGALKIHFSAVHLREMHKCTVEGCNMVFSSRRSRNRHSANPNPKLHS
PHIRRKISPHDGRTAQQFPVFSPGTAAAAAAVAGRLPVAFPGLLPPPPPH
HGHHPYVMFGGQAGLHGLGLLSTGCQDPDSGSVDNEQDADPEDDNDFVYV
DMQANSSSPAASSEDQEEHERDNEQDEEMHCSLSLASSSSIAADEERAAD
QPLDFSLHKRRKSEQDREQEQEQEQEREREAEKEQEQDVESDKEHEPEQE
HELEREKRSPSDAFSMDQLLGKRKRHDSTASSSACSTAAASSASSSSASA
SANPPQTSIKMDLDPDSDSAYMTSRRQMLPLPVLDLEEHHHLRLLQTQMF
AAAAAAAATSQAPPTAFLPAGSPVDLAKDSPPMWSLLSEMYRSMLLKTQH
QQYNHHHQLQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHHHHHQHH
QQQPQQQSPAATNAPISVASFLDH

BO01205.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
disco-PB 568 CG9908-PB 1..568 1..568 3050 100 Plus
disco-PA 568 CG9908-PA 1..568 1..568 3050 100 Plus
disco-r-PD 1311 CG32577-PD 432..855 43..517 602 34.4 Plus
disco-r-PC 1311 CG32577-PC 432..855 43..517 602 34.4 Plus
disco-r-PB 1311 CG32577-PB 432..855 43..517 602 34.4 Plus