Clone Sequence Records
BO01296.3prime Sequence
805 bp (568 high quality bases) assembled on 2005-11-30
> BO01296.3prime
ATGGTCTAGAAAGCTTGCAACAATTTCCATTTCACGCTCTATGCCCACGA
ACTTCAGCTGCTCCGTGGGTCCGTATCTGTAGTCAAAGAATAGCTCTTCG
CCGGGCTGAATGGCCCGCTTGGCAAAGATGCCGATGCGATGATCGCCGGT
GACCATCATAACCTTGGCATAGCAATTGGGATTAATGGAATGATTGGCAA
ACCGAATCTTGTTGCCCTTCCGAGTGGCATCCACAACAAAATCGTTGTTC
AGATTGAAAAGAAATGAGCACATGTACTTGTCGTAAACCTTGCCACGGCG
ATCGGCTTCATCTTGGGATATGATCTCGCCACAATATTCCGAAATGAACT
CATTCTTTTGCGCACCCTCCTTAAGAAAGATGCCCCAGCCGGCGATGTCA
GACGGAGCCATGAGCAGGTGCTTGTGCAGTCCTCGCTGCACGCACACGTT
CTTGCACGTGATCTTGGTCAGCTTAAACTGATCCGCTCCGCAGGCCTGGC
ACAGATCGGGATCACACTCGCGCACTGCCAGATAGCAAGGACACTGCTTC
GTATTGCACTGAGCCTTGCAGCGACAGCCGGGGAAACGATTCTGGCAATC
GCTGCTGCAGTTGCAGAACTTTTCGCAGAAGTTTTGTGTCTGAATGCAGG
AGCAGTTCATGTCGCATGGATGTCCGGGATGGTCGCAGGGCGTGTAGTTG
TACACGTGATTCGAGGATGAGTCCTTCTTTAGCTGAATCTTACGACAGTG
CAGCGACCACAGACGTTGCTTCTTCTTTCTCTTGCGCGGAGGTGTGAAGT
CCTGT
BO01296.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:36:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6502-PA | 2283 | E(z)-RA | 1494..2280 | 805..19 | 3885 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:23:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-RC | 2479 | CG6502-RC | 1627..2413 | 805..19 | 3905 | 99.7 | Minus |
E(z)-RB | 2464 | CG6502-RB | 1612..2398 | 805..19 | 3905 | 99.7 | Minus |
E(z)-RA | 2650 | CG6502-RA | 1798..2584 | 805..19 | 3905 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:23:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10634641..10635047 | 19..425 | 2035 | 100 | Plus |
3L | 28110227 | 3L | 10635116..10635495 | 426..805 | 1870 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:23:53 has no hits.
BO01296.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:27:49 Download gff for
BO01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-PA | 1494..2283 | 16..805 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:24:24 Download gff for
BO01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6502-PA | 1494..2283 | 16..805 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:31:42 Download gff for
BO01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 1798..2584 | 19..805 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:12:54 Download gff for
BO01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 1798..2584 | 19..805 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:12:54 Download gff for
BO01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10634641..10635047 | 19..425 | 100 | <- | Plus |
3L | 10635116..10635495 | 426..805 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:31:42 Download gff for
BO01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10627741..10628147 | 19..425 | 100 | <- | Plus |
arm_3L | 10628216..10628595 | 426..805 | 99 | | Plus |
BO01296.5prime Sequence
293 bp (272 high quality bases) assembled on 2005-11-30
> BO01296.5prime
GAAGTTATCAGTCGACATGAATAGCACTAAAGTGCCGCCCGAGTGGAAGA
GGCGTGTCAAGTCGGAGTACATCAAAATCAGGCAGCAGAAGCGCTACAAA
CGTGCCGACGAGATCAAGGAGGCGTGGATAAGAAACTGGGACGAGCACAA
CCACAATGTACAGGATCTGTACTGCGAGTCGAAGGTTTGGCAGGCTAAAC
CCTACGATCCGCCGCATGTGGACTGTGTGAAGCGGGCGGAGGTGACTAGC
TACAATGGCATTCCCAGCGGTCCGCAAAAGGTGCCCATTTGCG
BO01296.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:36:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6502-PA | 2283 | E(z)-RA | 1..277 | 17..293 | 1385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 18:50:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-RC | 2479 | CG6502-RC | 119..395 | 17..293 | 1385 | 100 | Plus |
E(z)-RB | 2464 | CG6502-RB | 119..395 | 17..293 | 1385 | 100 | Plus |
E(z)-RA | 2650 | CG6502-RA | 305..581 | 17..293 | 1385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 18:50:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10637423..10637578 | 293..138 | 780 | 100 | Minus |
3L | 28110227 | 3L | 10637639..10637761 | 139..17 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 18:50:32 has no hits.
BO01296.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:27:50 Download gff for
BO01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-PA | 1..277 | 17..293 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:24:25 Download gff for
BO01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6502-PA | 1..277 | 17..293 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:11:48 Download gff for
BO01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 298..581 | 10..293 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:26:55 Download gff for
BO01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 298..581 | 10..293 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:26:55 Download gff for
BO01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10637423..10637577 | 139..293 | 100 | <- | Minus |
3L | 10637640..10637768 | 10..138 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:11:48 Download gff for
BO01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10630523..10630677 | 139..293 | 100 | <- | Minus |
arm_3L | 10630740..10630868 | 10..138 | 96 | | Minus |
BO01296.complete Sequence
2314 bp assembled on 2007-10-05
GenBank Submission: FJ629469
> BO01296.complete
GAAGTTATCAGTCGACATGAATAGCACTAAAGTGCCGCCCGAGTGGAAGA
GGCGTGTCAAGTCGGAGTACATCAAAATCAGGCAGCAGAAGCGCTACAAA
CGTGCCGACGAGATCAAGGAGGCGTGGATAAGAAACTGGGACGAGCACAA
CCACAATGTACAGGATCTGTACTGCGAGTCGAAGGTTTGGCAGGCTAAAC
CCTACGATCCGCCGCATGTGGACTGTGTGAAGCGGGCGGAGGTGACTAGC
TACAATGGCATTCCCAGCGGTCCGCAAAAGGTGCCCATTTGCGTGATCAA
CGCGGTCACTCCCATACCCACCATGTACACGTGGGCACCAACACAGCAGA
ACTTCATGGTGGAGGATGAGACGGTGCTGCACAATATACCCTATATGGGC
GACGAGGTCCTCGATAAGGATGGCAAGTTCATAGAGGAACTGATCAAAAA
CTACGATGGCAAGGTTCACGGCGACAAGGATCCCTCGTTCATGGACGATG
CCATCTTCGTAGAACTGGTGCACGCCCTTATGCGCTCCTACAGCAAGGAA
CTGGAGGAAGCCGCTCCGGGTACAGCGACTGCCATTAAAACAGAGACGTT
GGCGAAATCAAAACAGGGCGAAGATGATGGGGTAGTTGATGTTGACGCAG
ATGGTGAATCTCCCATGAAGCTTGAGAAAACCGACAGCAAAGGGGATCTG
ACTGAAGTTGAGAAGAAGGAAACTGAAGAACCGCTGGAGACTGAAGATGC
GGATGTTAAGCCCGATGTGGAAGAAGTCAAGGACAAGCTGCCCTTCCCTG
CGCCCATTATTTTTCAGGCCATCAGCGCTAACTTTCCAGACAAGGGCACC
GCGCAAGAGCTCAAAGAAAAGTACATTGAGCTTACGGAGCACCAGGATCC
GGAGCGCCCACAGGAGTGCACACCCAACATTGACGGCATCAAGGCCGAGA
GCGTTTCCCGGGAAAGGACTATGCACTCCTTTCACACGCTCTTCTGTCGT
CGTTGCTTCAAATACGACTGCTTCCTGCACCGCTTGCAAGGACATGCGGG
TCCCAATCTCCAGAAGCGTCGCTATCCGGAACTGAAGCCTTTCGCCGAAC
CTTGCAGCAACTCCTGCTACATGTTGATCGATGGCATGAAGGAAAAGCTG
GCGGCCGATAGCAAGACACCTCCCATTGATTCCTGCAATGAGGCCAGCTC
CGAGGACAGTAATGACAGCAACAGTCAGTTTAGCAACAAGGACTTTAATC
ATGAGAATAGCAAGGATAATGGCCTGACTGTAAATAGCGCCGCTGTGGCT
GAGATCAACTCCATTATGGCTGGCATGATGAACATCACCAGTACGCAGTG
CGTTTGGACAGGCGCTGACCAAGCACTTTATCGGGTCTTGCATAAAGTGT
ATTTAAAGAACTACTGCGCGATTGCGCACAACATGCTGACCAAGACCTGT
CGTCAGGTGTACGAGTTTGCCCAGAAGGAGGATGCTGAGTTTAGCTTCGA
GGATTTGCGACAGGACTTCACACCTCCGCGCAAGAAGAAGAAGAAGCAAC
GTCTGTGGTCGCTGCACTGTCGTAAGATTCAGCTAAAGAAGGACTCATCC
TCGAATCACGTGTACAACTACACGCCCTGCGACCATCCCGGACATCCATG
CGACATGAACTGCTCCTGCATTCAGACACAAAACTTCTGCGAAAAGTTCT
GCAACTGCAGCAGCGATTGCCAGAATCGTTTCCCCGGCTGTCGCTGCAAG
GCTCAGTGCAATACGAAGCAGTGTCCTTGCTATCTGGCAGTGCGCGAGTG
TGATCCCGATCTGTGCCAGGCCTGCGGAGCGGATCAGTTTAAGCTGACCA
AGATCACGTGCAAGAACGTGTGCGTGCAGCGAGGACTGCACAAGCACCTG
CTCATGGCTCCGTCTGACATCGCCGGCTGGGGCATCTTTCTTAAGGAGGG
TGCGCAAAAGAATGAGTTCATTTCGGAATATTGTGGCGAGATCATATCCC
AAGATGAAGCCGATCGCCGTGGCAAGGTTTACGACAAGTACATGTGCTCA
TTTCTTTTCAATCTGAACAACGATTTTGTTGTGGATGCCACTCGGAAGGG
CAACAAGATTCGGTTTGCCAATCATTCCATTAATCCCAATTGCTATGCCA
AGGTTATGATGGTCACCGGCGATCATCGCATCGGCATCTTTGCCAAGCGG
GCCATTCAGCCCGGCGAAGAGCTATTCTTTGACTACAGATACGGACCCAC
GGAGCAGCTGAAGTTCGTGGGCATAGAGCGTGAAATGGAAATTGTTGCAA
GCTTTCTAGACCAT
BO01296.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:56:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-RB | 2283 | CG6502-PB | 1..2280 | 17..2296 | 11400 | 100 | Plus |
E(z)-RA | 2283 | CG6502-PA | 1..2280 | 17..2296 | 11400 | 100 | Plus |
E(z)-RC | 2298 | CG6502-PC | 1..2295 | 17..2296 | 11215 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-RB | 2464 | CG6502-RB | 119..2398 | 17..2296 | 11400 | 100 | Plus |
E(z)-RA | 2650 | CG6502-RA | 305..2584 | 17..2296 | 11400 | 100 | Plus |
E(z)-RC | 2479 | CG6502-RC | 119..2413 | 17..2296 | 11215 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10636843..10637578 | 873..138 | 3680 | 100 | Minus |
3L | 28110227 | 3L | 10635116..10635686 | 1889..1319 | 2855 | 100 | Minus |
3L | 28110227 | 3L | 10634641..10635047 | 2296..1890 | 2035 | 100 | Minus |
3L | 28110227 | 3L | 10635748..10635937 | 1319..1130 | 950 | 100 | Minus |
3L | 28110227 | 3L | 10636623..10636784 | 1032..871 | 810 | 100 | Minus |
3L | 28110227 | 3L | 10637639..10637761 | 139..17 | 615 | 100 | Minus |
3L | 28110227 | 3L | 10635995..10636093 | 1130..1032 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:56:55 has no hits.
BO01296.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:04:33 Download gff for
BO01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RB | 1..2283 | 17..2299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:18:59 Download gff for
BO01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RB | 111..2397 | 10..2296 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:23 Download gff for
BO01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 305..2584 | 17..2298 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:04:33 Download gff for
BO01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RB | 111..2397 | 10..2296 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:06:34 Download gff for
BO01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 305..2584 | 17..2298 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:06:34 Download gff for
BO01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10634638..10635047 | 1890..2298 | 99 | <- | Minus |
3L | 10635116..10635685 | 1320..1889 | 100 | <- | Minus |
3L | 10635748..10635937 | 1130..1319 | 100 | <- | Minus |
3L | 10635996..10636093 | 1032..1129 | 100 | <- | Minus |
3L | 10636624..10636784 | 871..1031 | 100 | <- | Minus |
3L | 10636846..10637577 | 139..870 | 100 | <- | Minus |
3L | 10637640..10637761 | 17..138 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:23 Download gff for
BO01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10627738..10628147 | 1890..2298 | 99 | <- | Minus |
arm_3L | 10628216..10628785 | 1320..1889 | 100 | <- | Minus |
arm_3L | 10628848..10629037 | 1130..1319 | 100 | <- | Minus |
arm_3L | 10629096..10629193 | 1032..1129 | 100 | <- | Minus |
arm_3L | 10629724..10629884 | 871..1031 | 100 | <- | Minus |
arm_3L | 10629946..10630677 | 139..870 | 100 | <- | Minus |
arm_3L | 10630740..10630861 | 17..138 | 100 | | Minus |
BO01296.pep Sequence
Translation from 16 to 2314
> BO01296.pep
MNSTKVPPEWKRRVKSEYIKIRQQKRYKRADEIKEAWIRNWDEHNHNVQD
LYCESKVWQAKPYDPPHVDCVKRAEVTSYNGIPSGPQKVPICVINAVTPI
PTMYTWAPTQQNFMVEDETVLHNIPYMGDEVLDKDGKFIEELIKNYDGKV
HGDKDPSFMDDAIFVELVHALMRSYSKELEEAAPGTATAIKTETLAKSKQ
GEDDGVVDVDADGESPMKLEKTDSKGDLTEVEKKETEEPLETEDADVKPD
VEEVKDKLPFPAPIIFQAISANFPDKGTAQELKEKYIELTEHQDPERPQE
CTPNIDGIKAESVSRERTMHSFHTLFCRRCFKYDCFLHRLQGHAGPNLQK
RRYPELKPFAEPCSNSCYMLIDGMKEKLAADSKTPPIDSCNEASSEDSND
SNSQFSNKDFNHENSKDNGLTVNSAAVAEINSIMAGMMNITSTQCVWTGA
DQALYRVLHKVYLKNYCAIAHNMLTKTCRQVYEFAQKEDAEFSFEDLRQD
FTPPRKKKKKQRLWSLHCRKIQLKKDSSSNHVYNYTPCDHPGHPCDMNCS
CIQTQNFCEKFCNCSSDCQNRFPGCRCKAQCNTKQCPCYLAVRECDPDLC
QACGADQFKLTKITCKNVCVQRGLHKHLLMAPSDIAGWGIFLKEGAQKNE
FISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRF
ANHSINPNCYAKVMMVTGDHRIGIFAKRAIQPGEELFFDYRYGPTEQLKF
VGIEREMEIVASFLDH
BO01296.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:22:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-PB | 760 | CG6502-PB | 1..760 | 1..760 | 4140 | 100 | Plus |
E(z)-PA | 760 | CG6502-PA | 1..760 | 1..760 | 4140 | 100 | Plus |
E(z)-PC | 765 | CG6502-PC | 1..765 | 1..760 | 4124 | 99.3 | Plus |
Su(var)3-9-PA | 635 | CG43664-PA | 410..621 | 547..759 | 235 | 30 | Plus |
Set1-PI | 1641 | CG40351-PI | 1502..1626 | 626..749 | 230 | 39.7 | Plus |