Clone Sequence Records
BO01341.3prime Sequence
834 bp (733 high quality bases) assembled on 2005-11-30
> BO01341.3prime
ATGGTCTAGAAAGCTTGCACTACGCTCCGGCGTCCCGTGGTGCTGATAGA
TCTGCTGAAGCTGCTGCTGCTGTTGGCTGTGCACCACCTGGCTGCTCGAT
GTAACCACGTCCTGCTGCATATGCTGCGGATGGTGGCCCGGATGGGGCGA
CTGCTGTTGCTGCTGCTGCTGCTGCTGTTGCATGTGCACCACGTGCTGCT
GCATGTGCTGCGGCGTCGGCGGACCCTGCTGCGCCGAGCTGTGGTGCTGC
GGCGTGCTGTGATGCTGCGGCGTTGGCGGATGCGGCGACGGACTATACGG
GAACTGTTGCTGTAACATATGCAACGAATTCTCCTGACTGTGCTCGATAA
TCTCAATGCTGCCGGTGGTGTTGCCCGAGGTGTTCAATAGCGCCACGCCA
CTCGTGTTGGCCACCACGTCGTATTTGCCGCGCTTGAAGCGGCCGTAGAG
CGAGCTGTAGGGCAGGTTATAGTGAATGGCCGCCTGGTTGATGGACATTT
GGCCAACGCGCACTGAGTTCAGGGCCTCGTTCATGGCATCCTCGGACCAG
GGTGTTGGATTCGAACGCGACAGCTCAATGCCCTCCCGTTTGCAGCGTCC
GTAAAGTGTTCCTGTGGGTATGCCAAACTCAGCGCTGGCTTTCTGCACCG
AAGTATTACCCGCCCGTATCGCCTCCAAGGCGCGCTCCAGATCCTCGGGC
GTCCACGTGGTCGGGGCGGCATTGAAGGGCGCCGCAAGGCGGATGCCTTC
GCGCCGTGCAATCTTGTAGAGCGTCGAGGATGGGATGCCGAANGCCTTTG
ACGCTTTGTTCGCGGATATCTGACCCGAACGCAG
BO01341.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:37:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2368-PC | 3195 | psq-RC | 2377..3192 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PA | 3141 | psq-RA | 2323..3138 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PI | 1920 | psq-RI | 1102..1917 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PJ | 1920 | psq-RJ | 1102..1917 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PK | 1920 | psq-RK | 1102..1917 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PH | 1938 | psq-RH | 1120..1935 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PG | 1938 | psq-RG | 1120..1935 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PD | 1938 | psq-RD | 1120..1935 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PF | 1938 | psq-RF | 1120..1935 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PB | 3195 | psq-RB | 2377..3192 | 834..19 | 4061 | 99.8 | Minus |
CG2368-PE | 1938 | psq-RE | 1120..1935 | 834..19 | 4061 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:14:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
psq-RK | 4640 | CG2368-RK | 2415..3230 | 834..19 | 4069 | 99.9 | Minus |
psq-RB | 5367 | CG2368-RB | 3142..3957 | 834..19 | 4069 | 99.9 | Minus |
psq-RF | 4780 | CG2368-RF | 2555..3370 | 834..19 | 4069 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:14:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10614532..10614838 | 325..19 | 1535 | 100 | Minus |
2R | 25286936 | 2R | 10613153..10613376 | 834..611 | 1109 | 99.6 | Minus |
2R | 25286936 | 2R | 10613942..10614126 | 509..325 | 925 | 100 | Minus |
2R | 25286936 | 2R | 10613766..10613870 | 613..509 | 525 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:14:32 has no hits.
BO01341.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:29:05 Download gff for
BO01341.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2368-PH | 1120..1938 | 16..834 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:26:23 Download gff for
BO01341.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2368-PE | 1120..1938 | 16..834 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:48:18 Download gff for
BO01341.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RF | 2555..3370 | 19..834 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:57:03 Download gff for
BO01341.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RF | 2555..3370 | 19..834 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:57:03 Download gff for
BO01341.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10614533..10614838 | 19..324 | 100 | | Minus |
2R | 10613153..10613375 | 612..834 | 99 | -> | Minus |
2R | 10613768..10613870 | 509..611 | 100 | -> | Minus |
2R | 10613943..10614126 | 325..508 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:48:18 Download gff for
BO01341.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6501448..6501631 | 325..508 | 100 | -> | Minus |
arm_2R | 6500658..6500880 | 612..834 | 99 | -> | Minus |
arm_2R | 6501273..6501375 | 509..611 | 100 | -> | Minus |
arm_2R | 6502038..6502343 | 19..324 | 100 | | Minus |
BO01341.5prime Sequence
742 bp (655 high quality bases) assembled on 2005-11-30
> BO01341.5prime
GAAGTTATCAGTCGACATGGCAGCGGTTCGAGGACATCAGTATTTCAGTC
TGCGCTGGAATAACTACCAGAACACGATGACGTCCGTGTTTCAGCAGCTG
CGCGAGGATCTCTCCTTTGTGGACGTCACTCTGTCCTGCGAGCATGGATC
CCTCAAGGCGCACAAGGTCGTCCTGTCCGCCTGTTCGACGTATTTCCAAA
AACTACTGCTCGAGAATCCGTGCAAACATCCCACAATTATCCTTCCCGCC
GACATTATCTTCACCGACCTGAAAACGATCATCGATTTTGTTTATCGTGG
TGAAATCGACGTCACCGAATCGGAATTACAGGGCCTCTTGCGCACCGCCG
AGCAGCTAAAGATCAAGGGACTCTGCGAAACCGCCGAGAACGCGGATGAC
CTGAACGACGCGGCCACTGCAACGATCACAGTTTCAGAGAACATACAGCA
GGCGGTCGTTGGCAATATAGTGAACGCCGCCATAGTTCCCGGAGCTCCGT
CGCCCTCCTTGGAACAGCAGCAGCAACACCACCAACAGCAGCAACAGCAG
CAGGCGCAGGAGCAGCACCAGCAACAGCAGGTGCATGCCCAGCAGCAACA
GCAGCAGCAGCAGCAAATAAACGCTGCCCTGCTTTACGCACACGGAGTGT
CCAGCGGAAGTGTATCTCTTTCCGGGCAATTGCTGAGCTCCTCGGCTAGC
GGCAGCAGCGGAAGTTTAGGCGGCGGACAGCAGGCATCACAG
BO01341.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:37:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2368-PC | 3195 | psq-RC | 1..618 | 17..634 | 3090 | 100 | Plus |
CG2368-PA | 3141 | psq-RA | 1..618 | 17..634 | 3090 | 100 | Plus |
CG2368-PL | 1608 | psq-RL | 1..618 | 17..634 | 3090 | 100 | Plus |
CG2368-PB | 3195 | psq-RB | 1..618 | 17..634 | 3090 | 100 | Plus |
CG2368-PC | 3195 | psq-RC | 624..726 | 640..742 | 490 | 99 | Plus |
CG2368-PA | 3141 | psq-RA | 624..726 | 640..742 | 490 | 99 | Plus |
CG2368-PL | 1608 | psq-RL | 624..726 | 640..742 | 490 | 99 | Plus |
CG2368-PB | 3195 | psq-RB | 624..726 | 640..742 | 490 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:48:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
psq-RN | 6336 | CG2368-RN | 762..1491 | 13..742 | 3575 | 99.5 | Plus |
psq-RM | 6336 | CG2368-RM | 762..1491 | 13..742 | 3575 | 99.5 | Plus |
psq-RB | 5367 | CG2368-RB | 762..1491 | 13..742 | 3575 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:48:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10610544..10610960 | 326..742 | 1995 | 98.6 | Plus |
2R | 25286936 | 2R | 10562024..10562191 | 165..332 | 840 | 100 | Plus |
2R | 25286936 | 2R | 10561801..10561956 | 13..168 | 765 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:48:48 has no hits.
BO01341.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:29:06 Download gff for
BO01341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2368-PB | 1..726 | 17..742 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:26:25 Download gff for
BO01341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2368-PL | 1..726 | 17..742 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:18:01 Download gff for
BO01341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RC | 474..1207 | 9..742 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:52:41 Download gff for
BO01341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RB | 758..1491 | 9..742 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:52:41 Download gff for
BO01341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10561797..10561954 | 9..166 | 98 | -> | Plus |
2R | 10562026..10562190 | 167..331 | 100 | -> | Plus |
2R | 10610550..10610960 | 332..742 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:18:01 Download gff for
BO01341.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6449531..6449695 | 167..331 | 100 | -> | Plus |
arm_2R | 6449302..6449459 | 9..166 | 98 | -> | Plus |
arm_2R | 6498055..6498465 | 332..742 | 99 | | Plus |
BO01341.complete Sequence
3226 bp (3226 high quality bases) assembled on 2006-05-02
GenBank Submission: FJ629480
> BO01341.complete
GAAGTTATCAGTCGACATGGCAGCGGTTCGAGGACATCAGTATTTCAGTC
TGCGCTGGAATAACTACCAGAACACGATGACGTCCGTGTTTCAGCAGCTG
CGCGAGGATCTCTCCTTTGTGGACGTCACTCTGTCCTGCGAGCATGGATC
CCTCAAGGCGCACAAGGTCGTCCTGTCCGCCTGTTCGACGTATTTCCAAA
AACTACTGCTCGAGAATCCGTGCAAACATCCCACAATTATCCTTCCCGCC
GACATTATCTTCACCGACCTGAAAACGATCATCGATTTTGTTTATCGTGG
TGAAATCGACGTCACCGAATCGGAATTACAGGGCCTCTTGCGCACCGCCG
AGCAGCTAAAGATCAAGGGACTCTGCGAAACCGCCGAGAACGCGGATGAC
CTGAACGACGCGGCCACTGCAACGATCACAGTTTCAGAGAACATACAGCA
GGCGGTCGTTGGCAATATAGTGAACGCCGCCATAGTTCCCGGAGCTCCGT
CGCCCTCCTTGGAACAGCAGCAGCAACACCACCAACAGCAGCAACAGCAG
CAGGCGCAGGAGCAGCACCAGCAACAGCAGGTGCATGCCCAGCAGCAACA
GCAGCAGCAGCAGCAAATAAACGCTGCCCTGCTTACGCAACACGGAGTGT
CCAGCGGAAGTGTATCTCTTTCCGGGCAATTGCTGAGCTCCTCGGCTAGC
GGCAGCAGCGGAAGTTTAGCCGGCGGACAGCAGGCATCACAGACGCCATC
CGGTTTGCAGCCGACGCCGCGCAAGTCTCGACTAAAGCGCTCCAAATCGC
CAGATTTGTCATCGGGCGGAGGAGCAGGAAGCTCTGGAGGCTCAAGTAGC
GGCTCAACGCAGCAGCAACCGCAGCCGGCGCACCACCACCACCCGCAGAC
CATTCTCATCCAGGGCCAAAATCCGAATTCCATTGTGAGCCTTCAGCAGA
CGGCCGACGGCAATTACATACCAGTTTCGGGTTCTGGCGACGATTCAGAC
GCCGAGGACCACGAGCACGAACACAACCACGGACACGGGCACGGGCACGG
AGGACATACGCACGGACACGGTCATAGCCACGAGCACAGTCACGATCACG
AGCACGAACATAAGCCGAACAAGATCTGCAAGACCGAGCACTCGGTGGCC
TCGCCGGCGTCGAATTCATCCAGCGCCTCGAACAATGCAGCGGGCGTGAG
CGGCGTGACATCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGC
GCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAAC
GGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCC
ACCAGCACCATCTGCCACCCCAGTCACCGTCACGGAGCACGTCGATCTGT
CCTGCAACCCTAGCACGGACACGCGCGATCTATCAAATACCACCGAACCG
CTCGATATAGACAATCATCTGGCTCAGCAGATCCATCGGCTGGATCAGTC
CCCCATGCACTCGATATCGCACCATCATACAGGCGATGAGAGCAACTCGA
ATCTGGTGCAGCATATCAAGAGCGAAGTGATCGAGGCCAAGCACCTGGCT
GCCCAGCATCATGCACTTAGCCAGGCCCAACAGCAACATGCCCATCATCA
GGCCCACCAGCAGCATCAACAGCATCAGCAACAGCAGCATCAACAACAGC
AGCAACATCTTCATGCCCAGCAGCTCTTGGCCCAGAGTCAGCTGCAGCAG
CAACAGCAACAGCAACAGCAGCAGCAGCAACACCACCAGCAGCAGCAACA
ACAGGCAGCAGCAGCCGCCGCAGCAGCTGGTGTGCATGGCCAGCATGGGG
GACATGTGACGCATGCCGACATCGGCGGTGCCACTGTCATGGAGATTGAT
CCGAGCCAGATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGT
CAACATGATGTCCTCCGGGCATATGGACATGTATAACTCGGATACGAGTG
AGGATTCGATGATGATCGCCAACGGTTCGCCGCACGATCAGAAGGAACCG
CACTATACGAATTTGGATCAGCAGCACGGTCTGGGTGGCAGCGTTTGCGG
CCCGGGGCCCGGCGGTGCTGGTGGCGGTGGGGGCATGAGTGGTGGGGCTG
GCTCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACA
CAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAG
CCTGACGAAAGCATCCGCCATTTATGGCATCCCATCGACCACCCTGTGGC
AACGTGCTCATCGCATGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACC
AAGTCGTGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCGCTGCGTTC
GGGTCAGATATCCGCGAACAAAGCGTCAAAGGCCTTCGGCATCCCATCCT
CGACGCTCTACAAGATTGCACGGCGCGAAGGCATCCGCCTTGCGGCGCCC
TTCAATGCCGCCCCGACCACGTGGACGCCCGAGGATCTGGAGCGCGCCTT
GGAGGCGATACGGGCGGGTAATACTTCGGTGCAGAAAGCCAGCGCTGAGT
TTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATT
GAGCTGTCGCGTTCGAATCCAACACCCTGGTCCGAGGATGCCATGAACGA
GGCCCTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCA
TTCACTATAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGCGGC
AAATACGACGTGGTGGCCAACACGAGTGGCGTGGCGCTATTGAACACCTC
GGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATT
CGTTGCATATGTTACAGCAACAGTTCCCGTATAGTCCGTCGCCGCATCCG
CCAACGCCGCAGCATCACAGCACGCCGCAGCACCACAGCTCGGCGCAGCA
GGGTCCGCCGACGCCGCAGCACATGCAGCAGCACGTGGTGCACATGCAAC
AGCAGCAGCAGCAGCAGCAACAGCAGTCGCCCCATCCGGGCCACCATCCG
CAGCATATGCAGCAGGACGTGGTTACATCGAGCAGCCAGGTGGTGCACAG
CCAACAGCAGCAGCAGCTTCAGCAGATCTATCAGCACCACGGGACGCCGG
AGCGTAGTGCAAGCTTTCTAGACCAT
BO01341.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:32:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
psq-RB | 3195 | CG2368-PB | 1..3192 | 17..3208 | 15945 | 100 | Plus |
psq-RC | 3195 | CG2368-PC | 1..3192 | 17..3208 | 15945 | 100 | Plus |
psq-RN | 3132 | CG2368-PN | 1..2155 | 17..2171 | 10760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:32:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
psq-RB | 5367 | CG2368-RB | 762..3957 | 13..3208 | 15950 | 99.9 | Plus |
psq-RC | 5210 | CG2368-RC | 605..3800 | 13..3208 | 15950 | 99.9 | Plus |
psq-RF | 4780 | CG2368-RF | 492..3370 | 330..3208 | 14380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:32:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10610544..10611515 | 326..1297 | 4845 | 99.9 | Plus |
2R | 25286936 | 2R | 10612736..10613376 | 1976..2616 | 3205 | 100 | Plus |
2R | 25286936 | 2R | 10611915..10612454 | 1437..1976 | 2700 | 100 | Plus |
2R | 25286936 | 2R | 10614532..10614838 | 2902..3208 | 1535 | 100 | Plus |
2R | 25286936 | 2R | 10613942..10614126 | 2718..2902 | 925 | 100 | Plus |
2R | 25286936 | 2R | 10562024..10562191 | 165..332 | 840 | 100 | Plus |
2R | 25286936 | 2R | 10561801..10561956 | 13..168 | 765 | 99.4 | Plus |
2R | 25286936 | 2R | 10611679..10611818 | 1297..1436 | 700 | 100 | Plus |
2R | 25286936 | 2R | 10613766..10613870 | 2614..2718 | 525 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 08:32:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6880 | 848..928 | 129 | 67.9 | Plus |
BO01341.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:04:43 Download gff for
BO01341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RB | 1..3195 | 17..3211 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:55:25 Download gff for
BO01341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RC | 482..3673 | 17..3210 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:10 Download gff for
BO01341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RC | 482..3673 | 17..3210 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:04:44 Download gff for
BO01341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RC | 474..3673 | 9..3208 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:20:09 Download gff for
BO01341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
psq-RC | 609..3800 | 17..3210 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:20:09 Download gff for
BO01341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10561805..10561954 | 17..166 | 100 | -> | Plus |
2R | 10562026..10562190 | 167..331 | 100 | -> | Plus |
2R | 10610550..10611515 | 332..1297 | 99 | -> | Plus |
2R | 10611680..10611818 | 1298..1436 | 100 | -> | Plus |
2R | 10611915..10612454 | 1437..1976 | 100 | -> | Plus |
2R | 10612737..10613375 | 1977..2615 | 100 | -> | Plus |
2R | 10613768..10613870 | 2616..2718 | 100 | -> | Plus |
2R | 10613943..10614126 | 2719..2902 | 100 | -> | Plus |
2R | 10614533..10614838 | 2903..3210 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:10 Download gff for
BO01341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6449310..6449459 | 17..166 | 100 | -> | Plus |
arm_2R | 6449531..6449695 | 167..331 | 100 | -> | Plus |
arm_2R | 6498055..6499020 | 332..1297 | 99 | -> | Plus |
arm_2R | 6499185..6499323 | 1298..1436 | 100 | -> | Plus |
arm_2R | 6499420..6499959 | 1437..1976 | 100 | -> | Plus |
arm_2R | 6500242..6500880 | 1977..2615 | 100 | -> | Plus |
arm_2R | 6501273..6501375 | 2616..2718 | 100 | -> | Plus |
arm_2R | 6501448..6501631 | 2719..2902 | 100 | -> | Plus |
arm_2R | 6502038..6502343 | 2903..3210 | 99 | | Plus |
BO01341.pep Sequence
Translation from 16 to 3226
> BO01341.pep
MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHK
VVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVT
ESELQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGN
IVNAAIVPGAPSPSLEQQQQHHQQQQQQQAQEQHQQQQVHAQQQQQQQQQ
INAALLTQHGVSSGSVSLSGQLLSSSASGSSGSLAGGQQASQTPSGLQPT
PRKSRLKRSKSPDLSSGGGAGSSGGSSSGSTQQQPQPAHHHHPQTILIQG
QNPNSIVSLQQTADGNYIPVSGSGDDSDAEDHEHEHNHGHGHGHGGHTHG
HGHSHEHSHDHEHEHKPNKICKTEHSVASPASNSSSASNNAAGVSGVTST
GQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSA
TPVTVTEHVDLSCNPSTDTRDLSNTTEPLDIDNHLAQQIHRLDQSPMHSI
SHHHTGDESNSNLVQHIKSEVIEAKHLAAQHHALSQAQQQHAHHQAHQQH
QQHQQQQHQQQQQHLHAQQLLAQSQLQQQQQQQQQQQQHHQQQQQQAAAA
AAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSS
GHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGSVCGPGPGG
AGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKAS
AIYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDALQNALEALRSGQISA
NKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRA
GNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSV
RVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTG
SIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSAQQGPPTP
QHMQQHVVHMQQQQQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQ
LQQIYQHHGTPERSASFLDH
BO01341.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:02:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
psq-PB | 1064 | CG2368-PB | 1..1064 | 1..1064 | 5613 | 100 | Plus |
psq-PC | 1064 | CG2368-PC | 1..1064 | 1..1064 | 5613 | 100 | Plus |
psq-PA | 1046 | CG2368-PA | 1..1046 | 1..1064 | 5483 | 98.3 | Plus |
psq-PM | 1123 | CG2368-PM | 1..1047 | 1..1068 | 5452 | 97.8 | Plus |
psq-PN | 1043 | CG2368-PN | 1..1043 | 1..1064 | 5451 | 98 | Plus |