Clone Sequence Records
BO01441.3prime Sequence
803 bp (796 high quality bases) assembled on 2005-11-30
> BO01441.3prime
ATGGTCTAGAAAGCTTGCGTTGAAACTTACCTCTTTATCTTTGGCAGCTA
ATAGAACAGCAGGCTGGCCGTTGTTGTTGTTATTGTTCTTCTTCTTGCGC
TTCTCGCTGTTGCCGCTGCTGCTGTTATTATTATTGTTGTTGTTCGTGTT
GCTGGTGGCGGTGTTGCTGGTATTGTTGTTATTGCTGGTATTTGTATTGT
TGTTGGCGCAATCATCGTCCTCCGCCGAACTGGCCACATGTTGCTCACTT
TCATTGCCGCCATTGTTGTTCTTTCGACTACAACTATTATTGCTATCGGT
TGTATTGTGATTATTGCTAACATTTAAACTAGCCTCCCCCGCATCCTTGT
TCTCCTCAAGATCCTCTGTATCCTGCTGCTGATGCTGCTGTTGTGTTGTT
GCACTTGGCTCAGTTCTGGTTTCTTGCTGCGCATCCAGCTCCATATCATC
AGCATTCGATTGCATCGAGGCATTCTCCTCCTCATCATCCTCGTCCTCAT
CCTCCTCCTCGTCCTCCTCCTCATCGTCCAGCTCCTCCTCGTCCTGGTGA
CTATTGTTGCTGTTGGTGTGATTGGCGTTGCTGGTGGTGCTGCCGCTTTT
GACGTTGCCAGTTGCAATCGGTGTTGCTGCTGCGGCTGCTGCAGCAGCGG
CTCCTGTTGCCACTGTTGCCGCTGGCTGTTCTGTGGGAATCGCAACTTCA
TTCGCCGGCGAATGGAGTGGTGATTGCTGTTGCTGCTGCTGTTGCAATGC
CGCCGCTGCTGCCGCGGCTGCCGCCTCCATCATCATCATGTCGACTGATA
ACT
BO01441.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:38:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11387-PB | 774 | ct-RB | 1..771 | 789..19 | 3855 | 100 | Minus |
CG11387-PA | 6528 | ct-RA | 565..1323 | 789..31 | 3795 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:41:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ct-RE | 11035 | CG11387-RE | 833..1591 | 789..31 | 3795 | 100 | Minus |
ct-RD | 10732 | CG11387-RD | 593..1351 | 789..31 | 3795 | 100 | Minus |
ct-RC | 11062 | CG11387-RC | 923..1681 | 789..31 | 3795 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:41:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7646221..7646991 | 789..19 | 3855 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 15:41:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..3051 | 773..18 | 333 | 54.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2967 | 759..67 | 325 | 55.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..7035 | 729..377 | 312 | 57.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6943 | 774..538 | 298 | 63.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6929 | 744..543 | 290 | 63.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2254..2910 | 743..67 | 288 | 54.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6915 | 682..512 | 281 | 66.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2856 | 681..73 | 267 | 55.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..7002 | 668..374 | 260 | 59.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6898 | 680..551 | 255 | 68.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2430 | 192..70 | 246 | 66.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2867 | 631..27 | 228 | 55.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2666 | 437..74 | 217 | 57.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6880 | 631..472 | 208 | 61.3 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1048..1163 | 698..586 | 194 | 65.5 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1088..1173 | 683..597 | 189 | 70.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2895 | 673..544 | 178 | 61.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6855 | 607..473 | 177 | 60 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2499..2663 | 770..618 | 176 | 62.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2955 | 683..531 | 173 | 59 | Minus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3255..3375 | 674..552 | 168 | 64 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1058..1157 | 172..67 | 165 | 65.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6927 | 588..371 | 163 | 57.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..7112 | 430..73 | 162 | 54.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7142..7200 | 613..555 | 132 | 73.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1485..1614 | 705..578 | 122 | 60.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6822..6912 | 440..350 | 121 | 62 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1090..1146 | 430..371 | 121 | 71.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1589 | 607..545 | 115 | 68.2 | Minus |
TART-A | 13424 | TART-A 13424bp | 8639..8677 | 639..601 | 114 | 76.9 | Minus |
BO01441.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed on 2007-01-18 01:30:21 has no hits.
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:28:18 Download gff for
BO01441.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11387-PB | 1..774 | 15..789 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:48:06 Download gff for
BO01441.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ct-RC | 917..1681 | 31..797 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:12:50 Download gff for
BO01441.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ct-RC | 917..1681 | 31..797 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:12:50 Download gff for
BO01441.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7646215..7646994 | 15..797 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:48:06 Download gff for
BO01441.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7540248..7541027 | 15..797 | 99 | | Minus |
BO01441.5prime Sequence
803 bp (716 high quality bases) assembled on 2005-11-30
> BO01441.5prime
GAAGTTATCAGTCGACATGATGATGATGGAGGCGGCAGCCGCGGCAGCAG
CGGCGGCATTGCAACAGCAGCAGCAACAGCAATCACCACTCCATTCGCCG
GCGAATGAAGTTGCGATTCCCACAGAACAGCCAGCGGCAACAGTGGCAAC
AGGAGCCGCTGCTGCAGCAGCCGCAGCAGCAACACCGATTGCAACTGGCA
ACGTCAAAAGCGGCAGCACCACCAGCAACGCCAATCACACCAACAGCAAC
AATAGTCACCAGGACGAGGAGGAGCTGGACGATGAGGAGGAGGACGAGGA
GGAGGATGAGGACGAGGATGATGAGGAGGAGAATGCCTCGATGCAATCGA
ATGCTGATGATATGGAGCTGGATGCGCAGCAAGAAACCAGAACTGAGCCA
AGTGCAACAACACAACAGCAGCATCAGCAGCAGGATACAGAGGATCTTGA
GGAGAACAAGGATGCGGGGGAGGCTAGTTTAAATGTTAGCAATAATCACA
ATACAACCGATAGCAATAATAGTTGTAGTCGAAAGAACAACAATGGCGGC
AATGAAAGTGAGCAACATGTGGCCAGTTCGGCGGAGGACGATGATTGCGC
CAACAACAATACAAATACCAGCAATAACAACAATACCAGCAACACCGCCA
CCAGCAACACGAACAACAACAATAATAATAACAGCAGCAGCGGCAACAGC
GAGAAGCGCAAGAAGAAGAACAATAACAACAACAACGGCCAGCCTGCTGT
TCTATTAGCTGCCAAAGATAAAGAGGTAAGTTTCAACGCAAGCTTTCTAG
ACC
BO01441.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:38:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11387-PB | 774 | ct-RB | 1..771 | 17..787 | 3855 | 100 | Plus |
CG11387-PA | 6528 | ct-RA | 565..1323 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:32:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ct-RE | 11035 | CG11387-RE | 833..1591 | 17..775 | 3795 | 100 | Plus |
ct-RD | 10732 | CG11387-RD | 593..1351 | 17..775 | 3795 | 100 | Plus |
ct-RC | 11062 | CG11387-RC | 923..1681 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:32:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7646221..7646991 | 17..787 | 3855 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 00:32:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..3051 | 33..788 | 333 | 54.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2967 | 47..739 | 325 | 55.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..7035 | 77..429 | 312 | 57.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6943 | 32..268 | 298 | 63.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6929 | 62..263 | 290 | 63.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2254..2910 | 63..739 | 288 | 54.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6915 | 124..294 | 281 | 66.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2856 | 125..733 | 267 | 55.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..7002 | 138..432 | 260 | 59.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6898 | 126..255 | 255 | 68.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2430 | 614..736 | 246 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2867 | 175..779 | 228 | 55.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2666 | 369..732 | 217 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6880 | 175..334 | 208 | 61.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1048..1163 | 108..220 | 194 | 65.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1088..1173 | 123..209 | 189 | 70.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2895 | 133..262 | 178 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6855 | 199..333 | 177 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2499..2663 | 36..188 | 176 | 62.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2955 | 123..275 | 173 | 59 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3255..3375 | 132..254 | 168 | 64 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1058..1157 | 634..739 | 165 | 65.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6927 | 218..435 | 163 | 57.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..7112 | 376..733 | 162 | 54.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7142..7200 | 193..251 | 132 | 73.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1485..1614 | 101..228 | 122 | 60.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6822..6912 | 366..456 | 121 | 62 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1090..1146 | 376..435 | 121 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1589 | 199..261 | 115 | 68.2 | Plus |
TART-A | 13424 | TART-A 13424bp | 8639..8677 | 167..205 | 114 | 76.9 | Plus |
BO01441.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed on 2007-01-18 01:30:22 has no hits.
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:28:19 Download gff for
BO01441.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11387-PB | 1..774 | 17..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:31:55 Download gff for
BO01441.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ct-RC | 917..1681 | 9..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:08:47 Download gff for
BO01441.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ct-RC | 917..1681 | 9..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:08:47 Download gff for
BO01441.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7646215..7646994 | 9..791 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:31:55 Download gff for
BO01441.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7540248..7541027 | 9..791 | 99 | | Plus |
BO01441.complete Sequence
805 bp (805 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ629499
> BO01441.complete
GAAGTTATCAGTCGACATGATGATGATGGAGGCGGCAGCCGCGGCAGCAG
CGGCGGCATTGCAACAGCAGCAGCAACAGCAATCACCACTCCATTCGCCG
GCGAATGAAGTTGCGATTCCCACAGAACAGCCAGCGGCAACAGTGGCAAC
AGGAGCCGCTGCTGCAGCAGCCGCAGCAGCAACACCGATTGCAACTGGCA
ACGTCAAAAGCGGCAGCACCACCAGCAACGCCAATCACACCAACAGCAAC
AATAGTCACCAGGACGAGGAGGAGCTGGACGATGAGGAGGAGGACGAGGA
GGAGGATGAGGACGAGGATGATGAGGAGGAGAATGCCTCGATGCAATCGA
ATGCTGATGATATGGAGCTGGATGCGCAGCAAGAAACCAGAACTGAGCCA
AGTGCAACAACACAACAGCAGCATCAGCAGCAGGATACAGAGGATCTTGA
GGAGAACAAGGATGCGGGGGAGGCTAGTTTAAATGTTAGCAATAATCACA
ATACAACCGATAGCAATAATAGTTGTAGTCGAAAGAACAACAATGGCGGC
AATGAAAGTGAGCAACATGTGGCCAGTTCGGCGGAGGACGATGATTGCGC
CAACAACAATACAAATACCAGCAATAACAACAATACCAGCAACACCGCCA
CCAGCAACACGAACAACAACAATAATAATAACAGCAGCAGCGGCAACAGC
GAGAAGCGCAAGAAGAAGAACAATAACAACAACAACGGCCAGCCTGCTGT
TCTATTAGCTGCCAAAGATAAAGAGGTAAGTTTCAACGCAAGCTTTCTAG
ACCAT
BO01441.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:59:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ct-RE | 6525 | CG11387-PE | 565..1323 | 17..775 | 3795 | 100 | Plus |
ct-RD | 6498 | CG11387-PD | 1..759 | 17..775 | 3795 | 100 | Plus |
ct-RC | 7152 | CG11387-PC | 655..1413 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:59:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ct-RE | 11035 | CG11387-RE | 833..1591 | 17..775 | 3795 | 100 | Plus |
ct-RD | 10732 | CG11387-RD | 593..1351 | 17..775 | 3795 | 100 | Plus |
ct-RC | 11062 | CG11387-RC | 923..1681 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:59:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7646221..7646991 | 17..787 | 3855 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 10:59:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..3051 | 33..788 | 333 | 54.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2967 | 47..739 | 325 | 55.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..7035 | 77..429 | 312 | 57.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6943 | 32..268 | 298 | 63.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6929 | 62..263 | 290 | 63.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2254..2910 | 63..739 | 288 | 54.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6915 | 124..294 | 281 | 66.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2856 | 125..733 | 267 | 55.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..7002 | 138..432 | 260 | 59.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6898 | 126..255 | 255 | 68.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2430 | 614..736 | 246 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2867 | 175..779 | 228 | 55.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2666 | 369..732 | 217 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6880 | 175..334 | 208 | 61.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1048..1163 | 108..220 | 194 | 65.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1088..1173 | 123..209 | 189 | 70.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2895 | 133..262 | 178 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6855 | 199..333 | 177 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2499..2663 | 36..188 | 176 | 62.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2955 | 123..275 | 173 | 59 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3255..3375 | 132..254 | 168 | 64 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1058..1157 | 634..739 | 165 | 65.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6927 | 218..435 | 163 | 57.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..7112 | 376..733 | 162 | 54.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7142..7200 | 193..251 | 132 | 73.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1485..1614 | 101..228 | 122 | 60.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6822..6912 | 366..456 | 121 | 62 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1090..1146 | 376..435 | 121 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1589 | 199..261 | 115 | 68.2 | Plus |
TART-A | 13424 | TART-A 13424bp | 8639..8677 | 167..205 | 114 | 76.9 | Plus |
BO01441.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 22:46:24 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:17:10 Download gff for
BO01441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ct-RB | 583..1362 | 9..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:55:46 Download gff for
BO01441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ct-RC | 923..1681 | 17..775 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 22:46:25 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:49 Download gff for
BO01441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ct-RC | 923..1681 | 17..775 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:35:49 Download gff for
BO01441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7646221..7646991 | 17..789 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:55:46 Download gff for
BO01441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7540254..7541024 | 17..789 | 99 | | Plus |
BO01441.pep Sequence
Translation from 16 to 805
> BO01441.pep
MMMMEAAAAAAAAALQQQQQQQSPLHSPANEVAIPTEQPAATVATGAAAA
AAAAATPIATGNVKSGSTTSNANHTNSNNSHQDEEELDDEEEDEEEDEDE
DDEEENASMQSNADDMELDAQQETRTEPSATTQQQHQQQDTEDLEENKDA
GEASLNVSNNHNTTDSNNSCSRKNNNGGNESEQHVASSAEDDDCANNNTN
TSNNNNTSNTATSNTNNNNNNNSSSGNSEKRKKKNNNNNNGQPAVLLAAK
DKEVSFNASFLDH
BO01441.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:16:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ct-PD | 2165 | CG11387-PD | 1..254 | 1..254 | 1300 | 99.6 | Plus |
ct-PE | 2174 | CG11387-PE | 189..442 | 1..254 | 1300 | 99.6 | Plus |
ct-PA | 2175 | CG11387-PA | 189..442 | 1..254 | 1300 | 99.6 | Plus |
ct-PC | 2383 | CG11387-PC | 219..472 | 1..254 | 1300 | 99.6 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 271..487 | 18..252 | 205 | 20.4 | Plus |