Clone Sequence Records
BO01447.3prime Sequence
860 bp (818 high quality bases) assembled on 2005-11-30
> BO01447.3prime
ATGGTCTAGAAAGCTTGCGACCTCGTGGCTCAGTAGAGGCGTATCATGGT
AGCGGGAGGCATGATTGAGACTGGTGCAGGGCAGCAGCCACAGCGCCGGA
TGTCCGCGTCCGAACACATCCGCCAGCAGCTGGTACTTGCGCCGATTTGG
ACGATAGGTGCCCTTCTGCTGTATCGCCTCCACGGCCGTCTCGTCGTACA
GAATCGCATGCAGCTGGTCCACCATGATGGCCGTAACGAACAGGCCGAAC
AGCGCCGACACCAGCATAAGGATAACCGAGTGAATCATTCGCAACTGGGT
TTCGATCACGTTCTGGCTGCACTCCTCGCAGGGCCACACCCAGGAACCGA
CGATAAGGGCAATGGAGTAGAGCGACAGCAGCGCCACGTAGATGAGGAAC
TGCAGGAAGTACTTCTGATTGCGCTCGCCCACACAGTTGTTGATCCAGGG
GCAGTGGTGATCCATGCGCCGGATGCACCGCTTGCAGATGCGACAATGAT
GGGCGCGTGGCGGCCTATACGTTTCGCAGCGGGTGCACACGGTCCATTCG
CTGCTGTGTCCATTACCGGGCGGAGGATTGTTTTTGTTGGTCGTGTGCAG
GTCGGAGAAGTCCAGACGATTGGCGGGCAGCGGCACAGTGCCTGGATCGG
AGAACACGGCCTTGGAGTGGGACATGGCCAACAGGAAGACGACGGTGTTA
AAGAGCACCACATGGAAGGACATCCAGAGGCTGCCCGGCATGGTGGTCAG
AATGATCCAACGGATGACCACATAGTCCGCGTACAGAACTGCTCCGTAGG
TGACTACCAAGCAGGCGATGCCACAGGGATCTCGGATAAAAACCATGTCG
ACTGATAACT
BO01447.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:38:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6627-PA | 831 | Dnz1-RA | 1..828 | 846..19 | 4140 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:09:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-RA | 1949 | CG6627-RA | 367..1194 | 846..19 | 4140 | 100 | Minus |
CG8314-RA | 1280 | CG8314-RA | 536..637 | 508..407 | 180 | 78.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:09:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10855654..10856101 | 286..733 | 2240 | 100 | Plus |
2L | 23513712 | 2L | 10855190..10855457 | 19..286 | 1340 | 100 | Plus |
2L | 23513712 | 2L | 10856163..10856278 | 731..846 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:09:47 has no hits.
BO01447.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:30:32 Download gff for
BO01447.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-PA | 1..831 | 18..846 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:28:33 Download gff for
BO01447.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6627-PA | 1..831 | 18..846 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:43:43 Download gff for
BO01447.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 363..1194 | 19..853 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:44:36 Download gff for
BO01447.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 363..1194 | 19..853 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 04:44:36 Download gff for
BO01447.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10855655..10856098 | 287..730 | 100 | <- | Plus |
2L | 10856163..10856282 | 731..853 | 97 | | Plus |
2L | 10855190..10855457 | 19..286 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:43:43 Download gff for
BO01447.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10855190..10855457 | 19..286 | 100 | <- | Plus |
arm_2L | 10855655..10856098 | 287..730 | 100 | <- | Plus |
arm_2L | 10856163..10856282 | 731..853 | 97 | | Plus |
BO01447.5prime Sequence
832 bp (819 high quality bases) assembled on 2005-11-30
> BO01447.5prime
GAAGTTATCAGTCGACATGGTTTTTATCCGAGATCCCTGTGGCATCGCCT
GCTTGGTAGTCACCTACGGAGCAGTTCTGTACGCGGACTATGTGGTCATC
CGTTGGATCATTCTGACCACCATGCCGGGCAGCCTCTGGATGTCCTTCCA
TGTGGTGCTCTTTAACACCGTCGTCTTCCTGTTGGCCATGTCCCACTCCA
AGGCCGTGTTCTCCGATCCAGGCACTGTGCCGCTGCCCGCCAATCGTCTG
GACTTCTCCGACCTGCACACGACCAACAAAAACAATCCTCCGCCCGGTAA
TGGACACAGCAGCGAATGGACCGTGTGCACCCGCTGCGAAACGTATAGGC
CGCCACGCGCCCATCATTGTCGCATCTGCAAGCGGTGCATCCGGCGCATG
GATCACCACTGCCCCTGGATCAACAACTGTGTGGGCGAGCGCAATCAGAA
GTACTTCCTGCAGTTCCTCATCTACGTGGCGCTGCTGTCGCTCTACTCCA
TTGCCCTTATCGTCGGTTCCTGGGTGTGGCCCTGCGAGGAGTGCAGCCAG
AACGTGATCGAAACCCAGTTGCGAATGATTCACTCGGTTATCCTTATGCT
GGTGTCGGCGCTGTTCGGCCTGTTCGTTACGGCCATCATGGTGGACCAGC
TGCATGCGATTCTGTACGACGAGACGGCCGTGGAGGCGATACAGCAGAAG
GGCACCTATCGTCCAAATCGGCGCAAGTACCAGCTGCTGGCGGATGTGTT
CGGACGCGGACATCCGGCGCTGTGGCTGCTGCCCTGCACCAGTCTCAATC
ATGCCTCCCGCTACCATGATACGCCTCTACTG
BO01447.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:38:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6627-PA | 831 | Dnz1-RA | 1..816 | 17..832 | 4080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:21:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-RA | 1949 | CG6627-RA | 367..1182 | 17..832 | 4080 | 100 | Plus |
CG8314-RA | 1280 | CG8314-RA | 536..637 | 355..456 | 180 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:21:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10855654..10856101 | 577..130 | 2240 | 100 | Minus |
2L | 23513712 | 2L | 10855202..10855457 | 832..577 | 1280 | 100 | Minus |
2L | 23513712 | 2L | 10856163..10856278 | 132..17 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:21:49 has no hits.
BO01447.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:30:33 Download gff for
BO01447.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-PA | 1..816 | 17..832 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:28:34 Download gff for
BO01447.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6627-PA | 1..816 | 17..832 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 05:01:25 Download gff for
BO01447.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 363..1182 | 10..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:03:18 Download gff for
BO01447.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 363..1182 | 10..832 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:03:18 Download gff for
BO01447.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10855202..10855457 | 577..832 | 100 | <- | Minus |
2L | 10855655..10856098 | 133..576 | 100 | <- | Minus |
2L | 10856163..10856282 | 10..132 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 05:01:25 Download gff for
BO01447.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10855202..10855457 | 577..832 | 100 | <- | Minus |
arm_2L | 10855655..10856098 | 133..576 | 100 | <- | Minus |
arm_2L | 10856163..10856282 | 10..132 | 97 | | Minus |
BO01447.complete Sequence
862 bp (862 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ629501
> BO01447.complete
GAAGTTATCAGTCGACATGGTTTTTATCCGAGATCCCTGTGGCATCGCCT
GCTTGGTAGTCACCTACGGAGCAGTTCTGTACGCGGACTATGTGGTCATC
CGTTGGATCATTCTGACCACCATGCCGGGCAGCCTCTGGATGTCCTTCCA
TGTGGTGCTCTTTAACACCGTCGTCTTCCTGTTGGCCATGTCCCACTCCA
AGGCCGTGTTCTCCGATCCAGGCACTGTGCCGCTGCCCGCCAATCGTCTG
GACTTCTCCGACCTGCACACGACCAACAAAAACAATCCTCCGCCCGGTAA
TGGACACAGCAGCGAATGGACCGTGTGCACCCGCTGCGAAACGTATAGGC
CGCCACGCGCCCATCATTGTCGCATCTGCAAGCGGTGCATCCGGCGCATG
GATCACCACTGCCCCTGGATCAACAACTGTGTGGGCGAGCGCAATCAGAA
GTACTTCCTGCAGTTCCTCATCTACGTGGCGCTGCTGTCGCTCTACTCCA
TTGCCCTTATCGTCGGTTCCTGGGTGTGGCCCTGCGAGGAGTGCAGCCAG
AACGTGATCGAAACCCAGTTGCGAATGATTCACTCGGTTATCCTTATGCT
GGTGTCGGCGCTGTTCGGCCTGTTCGTTACGGCCATCATGGTGGACCAGC
TGCATGCGATTCTGTACGACGAGACGGCCGTGGAGGCGATACAGCAGAAG
GGCACCTATCGTCCAAATCGGCGCAAGTACCAGCTGCTGGCGGATGTGTT
CGGACGCGGACATCCGGCGCTGTGGCTGCTGCCCTGCACCAGTCTCAATC
ATGCCTCCCGCTACCATGATACGCCTCTACTGAGCCACGAGGTCGCAAGC
TTTCTAGACCAT
BO01447.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:27:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-RA | 831 | CG6627-PA | 1..828 | 17..844 | 4140 | 100 | Plus |
CG8314-RA | 882 | CG8314-PA | 396..497 | 355..456 | 180 | 78.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:27:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-RA | 1949 | CG6627-RA | 367..1194 | 17..844 | 4140 | 100 | Plus |
CG8314-RA | 1280 | CG8314-RA | 536..637 | 355..456 | 180 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:27:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10855654..10856101 | 577..130 | 2240 | 100 | Minus |
2L | 23513712 | 2L | 10855190..10855457 | 844..577 | 1340 | 100 | Minus |
2L | 23513712 | 2L | 10856163..10856278 | 132..17 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:27:25 has no hits.
BO01447.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:46:02 Download gff for
BO01447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 1..831 | 17..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:16:46 Download gff for
BO01447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 388..1219 | 10..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:07 Download gff for
BO01447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 367..1194 | 17..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:46:02 Download gff for
BO01447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 388..1219 | 10..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:19:12 Download gff for
BO01447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 367..1194 | 17..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:19:12 Download gff for
BO01447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10855188..10855457 | 577..846 | 99 | <- | Minus |
2L | 10855655..10856098 | 133..576 | 100 | <- | Minus |
2L | 10856163..10856278 | 17..132 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:07 Download gff for
BO01447.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10855188..10855457 | 577..846 | 99 | <- | Minus |
arm_2L | 10855655..10856098 | 133..576 | 100 | <- | Minus |
arm_2L | 10856163..10856278 | 17..132 | 100 | | Minus |
BO01447.pep Sequence
Translation from 16 to 862
> BO01447.pep
MVFIRDPCGIACLVVTYGAVLYADYVVIRWIILTTMPGSLWMSFHVVLFN
TVVFLLAMSHSKAVFSDPGTVPLPANRLDFSDLHTTNKNNPPPGNGHSSE
WTVCTRCETYRPPRAHHCRICKRCIRRMDHHCPWINNCVGERNQKYFLQF
LIYVALLSLYSIALIVGSWVWPCEECSQNVIETQLRMIHSVILMLVSALF
GLFVTAIMVDQLHAILYDETAVEAIQQKGTYRPNRRKYQLLADVFGRGHP
ALWLLPCTSLNHASRYHDTPLLSHEVASFLDH
BO01447.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:37:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-PA | 276 | CG6627-PA | 1..276 | 1..276 | 1504 | 100 | Plus |
CG8314-PA | 293 | CG8314-PA | 33..287 | 4..267 | 424 | 32.2 | Plus |
CG1407-PB | 338 | CG1407-PB | 10..292 | 5..259 | 250 | 25.1 | Plus |
CG1407-PD | 352 | CG1407-PD | 10..292 | 5..259 | 250 | 25.1 | Plus |
CG1407-PA | 443 | CG1407-PA | 10..292 | 5..259 | 250 | 25.1 | Plus |