Clone Sequence Records
BO01495.3prime Sequence
865 bp (840 high quality bases) assembled on 2005-11-30
> BO01495.3prime
ATGGTCTAGAAAGCTTGCTCTGCTCATGATCTCATCGATGGTGAAGCCCA
GCATCCGCTTGGGCTTCTCTGAGCTCGAGGATGACGAGGATAGATCCAGG
ACAGGCAGATGCTGTGCCAAATTCTCAGGTTGAGGCGAACTCAATGCCTG
GTTTGGCACCGAATGTGAAGTGGCTGGTGAGGTGGTCACCACCACCTCCT
TGGTGCTCTGCTCGCTGTGGCTCTGGAGGTGACTCTTGAGGTTGGCCCGC
TGGTTGAAGCTCCGCTGGCAGATGGGACACTTGTGCGGACCCTCCTCCAG
ATGGGTGACCTTGTGCACGGCCAGGGTGCGCGACTGGCAGAAACCCTTGC
CGCAATCGCTGCACTTGAAGGGCTTGTCCTTGGAGTGGATGTACCGGTGG
TCCCGCAGATGATCCTGTCGCCGGAAGGCTTTGCCGCAGATGTCGCAGGA
GTAAGGCCTCTCGTCCGTGTGGGTTCTCTCATGGATGAGCAGATTGTACG
ACTTGGTGAACTGCCGGTTGCAGTACTTGCAGATGAACTGCTTCTTTGGC
CGACTGCTGCCAGTTGCGCCGCTGGGTACACCACTCGCTCCACCGGCACC
ACCCAGTTTCAGGGTGGGCATGGCTCCGAAGTGGCGACCCATGACCGCGG
CATGCAGACTATGGAGGCCAGCGGGATAGGGACGCACATGATGCGGATGT
GGGTGAGGGTGGTGCGGATGGCCGTGGTGGTGATGATGGTGCGGATGTTG
CTGCTGCTGCTGTTGCTGCTGGTAGATGGCTGCGTTGCGGATCCAGTGGT
TCATCAACTGCTGGTGCACGGCCACGGGGATCGGCGCTGGCTGTGGGATA
AACTGGATACTGCTG
BO01495.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:39:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3851-PA | 1179 | odd-RA | 367..1176 | 828..19 | 4050 | 100 | Minus |
| CG3242-PA | 1737 | sob-RA | 1174..1314 | 546..406 | 405 | 91.4 | Minus |
| CG10021-PB | 2235 | bowl-RB | 709..914 | 540..335 | 355 | 86.8 | Minus |
| CG10021-PC | 2235 | bowl-RC | 709..914 | 540..335 | 355 | 86.8 | Minus |
| CG10021-PD | 2235 | bowl-RD | 709..914 | 540..335 | 355 | 86.8 | Minus |
| CG10021-PA | 2235 | bowl-RA | 709..914 | 540..335 | 355 | 86.8 | Minus |
| CG3851-PA | 1179 | odd-RA | 331..369 | 865..827 | 195 | 100 | Minus |
| CG17816-PD | 2319 | CG17816-RD | 1844..1877 | 771..738 | 145 | 97 | Minus |
| CG17816-PB | 2637 | CG17816-RB | 2516..2549 | 771..738 | 145 | 97 | Minus |
| CG15470-PA | 1038 | CG15470-RA | 742..769 | 771..744 | 140 | 100 | Minus |
| CG7958-PA | 3408 | tna-RA | 206..233 | 773..746 | 140 | 100 | Minus |
| CG7958-PB | 3450 | tna-RB | 248..275 | 773..746 | 140 | 100 | Minus |
| CG12701-PB | 4791 | CG12701-RB | 509..536 | 776..749 | 140 | 100 | Minus |
| CG12701-PA | 4791 | CG12701-RA | 509..536 | 776..749 | 140 | 100 | Minus |
| CG11895-PA | 10725 | stan-RA | 10376..10403 | 773..746 | 140 | 100 | Minus |
| CG1028-PH | 894 | Antp-RH | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PK | 1086 | Antp-RK | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PG | 1086 | Antp-RG | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PF | 1098 | Antp-RF | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PE | 1098 | Antp-RE | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PD | 1125 | Antp-RD | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PN | 1125 | Antp-RN | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PL | 1137 | Antp-RL | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PI | 1137 | Antp-RI | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PJ | 1137 | Antp-RJ | 327..353 | 772..746 | 135 | 100 | Minus |
| CG1028-PM | 1137 | Antp-RM | 327..353 | 772..746 | 135 | 100 | Minus |
| CG33261-PI | 1704 | Trl-RI | 1395..1421 | 772..746 | 135 | 100 | Minus |
| CG33261-PA | 1749 | Trl-RA | 1395..1421 | 772..746 | 135 | 100 | Minus |
| CG33261-PF | 1749 | Trl-RF | 1395..1421 | 772..746 | 135 | 100 | Minus |
| CG31240-PA | 1839 | repo-RA | 441..467 | 772..746 | 135 | 100 | Minus |
| CG31761-PC | 1899 | bru-2-RC | 277..308 | 771..740 | 135 | 96.8 | Minus |
| CG31761-PA | 1899 | bru-2-RA | 277..308 | 771..740 | 135 | 96.8 | Minus |
| CG31761-PD | 2214 | bru-2-RD | 277..308 | 771..740 | 135 | 96.8 | Minus |
| CG31761-PE | 2682 | bru-2-RE | 277..308 | 771..740 | 135 | 96.8 | Minus |
| CG11641-PA | 2985 | CG11641-RA | 382..413 | 771..740 | 135 | 96.8 | Minus |
| CG13598-PA | 3549 | sba-RA | 1077..1103 | 772..746 | 135 | 100 | Minus |
| CG13598-PB | 4089 | sba-RB | 1077..1103 | 772..746 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:23:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-RA | 2347 | CG3851-RA | 729..1574 | 865..19 | 4210 | 99.9 | Minus |
| sob-RA | 2611 | CG3242-RA | 1764..2083 | 546..227 | 820 | 84.1 | Minus |
| bowl-RH | 3435 | CG10021-RH | 1060..1378 | 552..234 | 710 | 81.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3604997..3605842 | 19..865 | 4185 | 99.9 | Plus |
| 2L | 23513712 | 2L | 3578861..3579006 | 401..546 | 535 | 91.1 | Plus |
| 2L | 23513712 | 2L | 3780422..3780581 | 552..393 | 485 | 86.9 | Minus |
| 2L | 23513712 | 2L | 3578541..3578704 | 227..390 | 310 | 79.3 | Plus |
| 2L | 23513712 | 2L | 3781903..3782064 | 395..234 | 225 | 75.9 | Minus |
Blast to na_te.dros performed 2015-02-12 10:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 1200..1277 | 801..716 | 114 | 65.1 | Minus |
BO01495.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:31:43 Download gff for
BO01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-PA | 331..1179 | 18..865 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:30:22 Download gff for
BO01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3851-PA | 331..1179 | 18..865 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:48:52 Download gff for
BO01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 729..1580 | 11..865 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:59:04 Download gff for
BO01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 729..1580 | 11..865 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:59:04 Download gff for
BO01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3604998..3605842 | 20..865 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:48:52 Download gff for
BO01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3604998..3605842 | 20..865 | 99 | | Plus |
BO01495.5prime Sequence
857 bp (785 high quality bases) assembled on 2005-11-30
> BO01495.5prime
GAAGTTATCAGTCGACATGTCTTCCACATCGGCCTCACCCATCAGCAACA
TAACCGTGGATGACGAGCTCAACTTAAGCAGAGAACAAGACTTTGCTGAA
GAGGATTTCATAGTGATCAAGGAGGAGCGCGAGACAAGTCTCTCCCCCAT
GCTGACGCCCCCGCACACGCCCACCGAGGAGCCGCTGAGGAGAGTGCATC
CGGCGATAAGCGAGGAGGCGGTGGCCACCCAGCTGCACATGCGACACATG
GCCCACTACCAGCAGCAGCAACAACAGCAGCAACAGCAGCAGCAGCACCG
CCTGTGGCTGCAGATGCAGCAGCAGCAGCAACAACATCAGGCTCCACAGC
AGTATCCAGTTTATCCCACAGCCAGCGCCGATCCCGTGGCCGTGCACCAG
CAGTTGATGAACCACTGGATCCGCAACGCAGCCATCTACCAGCAGCAACA
GCAGCAGCAGCAACATCCGCACCATCATCACCACCACGGCCATCCGCACC
ACCCTCACCCACATCCGCATCATGTGCGTCCCTATCCCGCTGGCCTCCAT
AGTCTGCATGCCGCGGTCATGGGTCGCCACTTCGGAGCCATGCCCACCCT
GAAACTGGGTGGTGCCGGTGGAGCGAGTGGTGTACCCAGCGGCGCAACTG
GCAGCAGTCGGCCAAAGAAGCAGTTCATCTGCAAGTACTGCAACCGGCAG
TTCACCAAGTCGTACAATCTGCTCATCCATGAGAGAACCCACACGGACGA
GAGGCCTTACTCCTGCGACATCTGCGGCAAAGCCTTCCGGCGACAGGATC
ATCTGCGGGACCACCGGTACATCCACTCCAAGGACAAAGCCCTTCAAGTG
CAGCGAT
BO01495.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:39:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3851-PA | 1179 | odd-RA | 1..821 | 17..837 | 4105 | 100 | Plus |
| CG3242-PA | 1737 | sob-RA | 1174..1314 | 665..805 | 405 | 91.4 | Plus |
| CG10021-PB | 2235 | bowl-RB | 709..872 | 671..834 | 320 | 87.8 | Plus |
| CG10021-PC | 2235 | bowl-RC | 709..872 | 671..834 | 320 | 87.8 | Plus |
| CG10021-PD | 2235 | bowl-RD | 709..872 | 671..834 | 320 | 87.8 | Plus |
| CG10021-PA | 2235 | bowl-RA | 709..872 | 671..834 | 320 | 87.8 | Plus |
| CG17816-PD | 2319 | CG17816-RD | 1844..1877 | 440..473 | 145 | 97 | Plus |
| CG17816-PB | 2637 | CG17816-RB | 2516..2549 | 440..473 | 145 | 97 | Plus |
| CG15470-PA | 1038 | CG15470-RA | 742..769 | 440..467 | 140 | 100 | Plus |
| CG7958-PA | 3408 | tna-RA | 206..233 | 438..465 | 140 | 100 | Plus |
| CG7958-PB | 3450 | tna-RB | 248..275 | 438..465 | 140 | 100 | Plus |
| CG12701-PB | 4791 | CG12701-RB | 509..536 | 435..462 | 140 | 100 | Plus |
| CG12701-PA | 4791 | CG12701-RA | 509..536 | 435..462 | 140 | 100 | Plus |
| CG11895-PA | 10725 | stan-RA | 10376..10403 | 438..465 | 140 | 100 | Plus |
| CG1028-PH | 894 | Antp-RH | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PK | 1086 | Antp-RK | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PG | 1086 | Antp-RG | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PF | 1098 | Antp-RF | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PE | 1098 | Antp-RE | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PD | 1125 | Antp-RD | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PN | 1125 | Antp-RN | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PL | 1137 | Antp-RL | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PI | 1137 | Antp-RI | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PJ | 1137 | Antp-RJ | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PM | 1137 | Antp-RM | 327..353 | 439..465 | 135 | 100 | Plus |
| CG33261-PI | 1704 | Trl-RI | 1395..1421 | 439..465 | 135 | 100 | Plus |
| CG33261-PA | 1749 | Trl-RA | 1395..1421 | 439..465 | 135 | 100 | Plus |
| CG33261-PF | 1749 | Trl-RF | 1395..1421 | 439..465 | 135 | 100 | Plus |
| CG31240-PA | 1839 | repo-RA | 441..467 | 439..465 | 135 | 100 | Plus |
| CG31761-PC | 1899 | bru-2-RC | 277..308 | 440..471 | 135 | 96.8 | Plus |
| CG31761-PA | 1899 | bru-2-RA | 277..308 | 440..471 | 135 | 96.8 | Plus |
| CG31761-PD | 2214 | bru-2-RD | 277..308 | 440..471 | 135 | 96.8 | Plus |
| CG31761-PE | 2682 | bru-2-RE | 277..308 | 440..471 | 135 | 96.8 | Plus |
| CG11641-PA | 2985 | CG11641-RA | 382..413 | 440..471 | 135 | 96.8 | Plus |
| CG13598-PA | 3549 | sba-RA | 1077..1103 | 439..465 | 135 | 100 | Plus |
| CG13598-PB | 4089 | sba-RB | 1077..1103 | 439..465 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:51:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-RA | 2347 | CG3851-RA | 399..1238 | 17..857 | 4180 | 99.9 | Plus |
| sob-RA | 2611 | CG3242-RA | 1764..1949 | 665..851 | 625 | 89.3 | Plus |
| bowl-RH | 3435 | CG10021-RH | 1060..1252 | 659..852 | 570 | 86.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:51:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3605333..3606101 | 857..88 | 3800 | 99.9 | Minus |
| 2L | 23513712 | 2L | 3578861..3579006 | 810..665 | 535 | 91.1 | Minus |
| 2L | 23513712 | 2L | 3780422..3780581 | 659..818 | 485 | 86.9 | Plus |
| 2L | 23513712 | 2L | 3606286..3606358 | 89..17 | 365 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 05:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 1200..1277 | 410..495 | 114 | 65.1 | Plus |
BO01495.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:31:44 Download gff for
BO01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-PA | 1..840 | 17..857 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:30:23 Download gff for
BO01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3851-PA | 1..840 | 17..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:18:28 Download gff for
BO01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 392..1238 | 9..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:00:11 Download gff for
BO01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 392..1238 | 9..857 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:00:11 Download gff for
BO01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3605333..3606099 | 90..857 | 99 | <- | Minus |
| 2L | 3606286..3606362 | 11..89 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:18:28 Download gff for
BO01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3605333..3606099 | 90..857 | 99 | <- | Minus |
| arm_2L | 3606286..3606362 | 11..89 | 94 | <- | Minus |
BO01495.complete Sequence
1210 bp (1210 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ629521
> BO01495.complete
GAAGTTATCAGTCGACATGTCTTCCACATCGGCCTCACCCATCAGCAACA
TAACCGTGGATGACGAGCTCAACTTAAGCAGAGAACAAGACTTTGCTGAA
GAGGATTTCATAGTGATCAAGGAGGAGCGCGAGACAAGTCTCTCCCCCAT
GCTGACGCCCCCGCACACGCCCACCGAGGAGCCGCTGAGGAGAGTGCATC
CGGCGATAAGCGAGGAGGCGGTGGCCACCCAGCTGCACATGCGACACATG
GCCCACTACCAGCAGCAGCAACAACAGCAGCAACAGCAGCAGCAGCACCG
CCTGTGGCTGCAGATGCAGCAGCAGCAGCAACAACATCAGGCTCCACAGC
AGTATCCAGTTTATCCCACAGCCAGCGCCGATCCCGTGGCCGTGCACCAG
CAGTTGATGAACCACTGGATCCGCAACGCAGCCATCTACCAGCAGCAACA
GCAGCAGCAGCAACATCCGCACCATCATCACCACCACGGCCATCCGCACC
ACCCTCACCCACATCCGCATCATGTGCGTCCCTATCCCGCTGGCCTCCAT
AGTCTGCATGCCGCGGTCATGGGTCGCCACTTCGGAGCCATGCCCACCCT
GAAACTGGGTGGTGCCGGTGGAGCGAGTGGTGTACCCAGCGGCGCAACTG
GCAGCAGTCGGCCAAAGAAGCAGTTCATCTGCAAGTACTGCAACCGGCAG
TTCACCAAGTCGTACAATCTGCTCATCCATGAGAGAACCCACACGGACGA
GAGGCCTTACTCCTGCGACATCTGCGGCAAAGCCTTCCGGCGACAGGATC
ATCTGCGGGACCACCGGTACATCCACTCCAAGGACAAGCCCTTCAAGTGC
AGCGATTGCGGCAAGGGTTTCTGCCAGTCGCGCACCCTGGCCGTGCACAA
GGTCACCCATCTGGAGGAGGGTCCGCACAAGTGTCCCATCTGCCAGCGGA
GCTTCAACCAGCGGGCCAACCTCAAGAGTCACCTCCAGAGCCACAGCGAG
CAGAGCACCAAGGAGGTGGTGGTGACCACCTCACCAGCCACTTCACATTC
GGTGCCAAACCAGGCATTGAGTTCGCCTCAACCTGAGAATTTGGCACAGC
ATCTGCCTGTCCTGGATCTATCCTCGTCATCCTCGAGCTCAGAGAAGCCC
AAGCGGATGCTGGGCTTCACCATCGATGAGATCATGAGCAGAGCAAGCTT
TCTAGACCAT
BO01495.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-RA | 1179 | CG3851-PA | 1..1176 | 17..1192 | 5880 | 100 | Plus |
| sob-RA | 1737 | CG3242-PA | 1174..1493 | 665..984 | 820 | 83.8 | Plus |
| bowl-RH | 2235 | CG10021-PH | 697..1015 | 659..977 | 695 | 81.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:37:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-RA | 2347 | CG3851-RA | 399..1574 | 17..1192 | 5880 | 100 | Plus |
| sob-RA | 2611 | CG3242-RA | 1764..2083 | 665..984 | 820 | 83.8 | Plus |
| bowl-RH | 3435 | CG10021-RH | 1060..1378 | 659..977 | 695 | 81.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:37:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3604997..3606101 | 1192..88 | 5525 | 100 | Minus |
| 2L | 23513712 | 2L | 3578861..3579006 | 810..665 | 535 | 91.1 | Minus |
| 2L | 23513712 | 2L | 3780422..3780581 | 659..818 | 485 | 86.9 | Plus |
| 2L | 23513712 | 2L | 3606286..3606358 | 89..17 | 365 | 100 | Minus |
| 2L | 23513712 | 2L | 3578541..3578704 | 984..821 | 310 | 79.3 | Minus |
| 2L | 23513712 | 2L | 3781903..3782064 | 816..977 | 225 | 75.9 | Plus |
Blast to na_te.dros performed 2014-11-28 08:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 1200..1277 | 410..495 | 114 | 65.1 | Plus |
BO01495.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:45:39 Download gff for
BO01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Smr-RC | 1345..1358 | 440..454 | 93 | -> | Plus |
| Smr-RC | 1588..1603 | 455..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:00:39 Download gff for
BO01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 391..1566 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:13 Download gff for
BO01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 399..1574 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:45:39 Download gff for
BO01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Smr-RC | 2703..2716 | 440..454 | 93 | -> | Plus |
| Smr-RC | 2946..2961 | 455..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:21:43 Download gff for
BO01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 399..1574 | 17..1194 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:21:43 Download gff for
BO01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3604995..3606099 | 90..1194 | 99 | <- | Minus |
| 2L | 3606286..3606358 | 17..89 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:13 Download gff for
BO01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3604995..3606099 | 90..1194 | 99 | <- | Minus |
| arm_2L | 3606286..3606358 | 17..89 | 100 | | Minus |
BO01495.pep Sequence
Translation from 16 to 1210
> BO01495.pep
MSSTSASPISNITVDDELNLSREQDFAEEDFIVIKEERETSLSPMLTPPH
TPTEEPLRRVHPAISEEAVATQLHMRHMAHYQQQQQQQQQQQQHRLWLQM
QQQQQQHQAPQQYPVYPTASADPVAVHQQLMNHWIRNAAIYQQQQQQQQH
PHHHHHHGHPHHPHPHPHHVRPYPAGLHSLHAAVMGRHFGAMPTLKLGGA
GGASGVPSGATGSSRPKKQFICKYCNRQFTKSYNLLIHERTHTDERPYSC
DICGKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLE
EGPHKCPICQRSFNQRANLKSHLQSHSEQSTKEVVVTTSPATSHSVPNQA
LSSPQPENLAQHLPVLDLSSSSSSSEKPKRMLGFTIDEIMSRASFLDH
BO01495.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:39:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-PA | 392 | CG3851-PA | 1..392 | 1..392 | 2131 | 100 | Plus |
| sob-PA | 578 | CG3242-PA | 344..503 | 175..328 | 607 | 68.8 | Plus |
| bowl-PH | 744 | CG10021-PH | 231..351 | 213..333 | 597 | 82.6 | Plus |
| bowl-PG | 744 | CG10021-PG | 231..351 | 213..333 | 597 | 82.6 | Plus |
| bowl-PF | 744 | CG10021-PF | 231..351 | 213..333 | 597 | 82.6 | Plus |
