Clone BO01503 Report

Search the DGRC for BO01503

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:15
Well:3
Vector:pDNR-Dual
Associated Gene/Transcripttap-RA
Protein status:BO01503.pep:
Sequenced Size:1228

Clone Sequence Records

BO01503.3prime Sequence

828 bp (748 high quality bases) assembled on 2005-11-30

> BO01503.3prime
ATGGTCTAGAAAGCTTGCCACCTGCGGGGCGAAGTTTTTGTAGCTGTGTT
GATGTGGAACGGGATGCACGTGTGCCTGATCCTCCGGATAGTCCTTCCAT
GGCGGTGTTTGCGAGTAGAAGCTGCTCTGCTGGTGAATCCCAGAATCCAA
GTTCGTAGAATGAAGATTGGCAGCTGCATCGAAGGATCCCCTGAACAGAT
CGTATTTCTCCTGCGAGAACTGCTGCGGGCTGGACTCCTGCTGGGGATTA
GGCTGCAGATGGTGAGGCTGATGCGGCTGCTGTTGCTGTTGGTGGTAAAA
CCGCATGCTGCCTGTAAAGTCGAATCCTGGTGGCTGCTGCGGATAGTCCA
TGCCGTGCTGAAAGCCACCCATCGCCGGCGGCTGCTCCGCGTGCGATGCT
GGAGCAGTCTGGTGCTGTGCAAGAGGCGCCATTCCCTGTCCATAGGGGAA
CATTCGTCCGAACAAGGGATACGGCTGTGGATTCACGAAAAGAGCATCGA
AGAGCTCCTTGGTAATCCTCTCACCACTCAGCGTGAAGTTCTGCAGCTTC
TCCAGATCCAGGTTGATTGAACCTCCGCTTTCCAGCACCTGCTCCAGGGC
AAAGATGTAGTTGTGCGCAAATCGCAGAATCTCGATCTTCGTCAGCTTCG
TCTCCTCGGGAAGCGAGGGCAGAGTGACGCGTAGTTTCTCCAGGGCATCA
TTCAAGTTATGCATCCGATTCCGCTCCCGGTCATTGGCCTTCATGCGGCG
GAAACGCTTGATCTTCACCACTTGGGTTGGACTGCGCGAGCGAGTTACTC
TGTTCTTGCCGACGGCATATTTGCGTTT

BO01503.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7659-PA 1197 tap-RA 385..1194 828..19 4050 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:24:10
Subject Length Description Subject Range Query Range Score Percent Strand
tap-RA 2130 CG7659-RA 496..1305 828..19 4050 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:24:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17360177..17360986 828..19 4050 100 Minus
Blast to na_te.dros performed 2015-02-12 10:24:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6710..6835 325..196 162 61.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6795..6856 296..235 148 71 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2262..2380 355..236 146 61.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6819 296..236 143 70.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2289..2431 381..239 138 56.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2326..2422 296..203 136 61.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6864 351..200 131 59.6 Minus
roo 9092 roo DM_ROO 9092bp 1089..1146 296..239 128 69 Minus
gypsy11 4428 gypsy11 GYPSY11 4428bp 966..1029 300..235 127 70.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6843 296..203 120 61.7 Minus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7928..7994 318..252 119 64.2 Minus
TART-C 11124 TART-C TARTC 11124bp 9372..9438 318..252 119 64.2 Minus
roo 9092 roo DM_ROO 9092bp 1057..1145 346..252 118 63.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6813..6857 296..252 117 73.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2389 286..203 114 62.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2353..2414 296..235 112 64.5 Minus
roo 9092 roo DM_ROO 9092bp 1122..1163 296..255 111 73.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2465 360..220 110 59.7 Minus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3265..3336 312..240 110 63 Minus

BO01503.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:31:50 Download gff for BO01503.3prime
Subject Subject Range Query Range Percent Splice Strand
tap-PA 385..1197 18..828 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:30:35 Download gff for BO01503.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7659-PA 385..1197 18..828 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:48:55 Download gff for BO01503.3prime
Subject Subject Range Query Range Percent Splice Strand
tap-RA 496..1316 10..828 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:59:51 Download gff for BO01503.3prime
Subject Subject Range Query Range Percent Splice Strand
tap-RA 496..1316 10..828 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:59:51 Download gff for BO01503.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 17360177..17360997 10..828 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:48:55 Download gff for BO01503.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17353277..17354097 10..828 99   Minus

BO01503.5prime Sequence

940 bp (762 high quality bases) assembled on 2005-11-30

> BO01503.5prime
GAAGTTATCAGTCGACATGGCCGCCTGCTACAATGCCTATAGCGCTGGAT
CACAGTCCTTCGAGTTCGACGAGGACGACGACGACGCCTCCTTCGACAGT
GGCTACGAGAAGAGTTTCGAGACGGAGGCCCAGTTGAGCTCACGACGCCG
CTTGGACTTTGGCACTCCGCCGACTCCGGCGATCCCGCAACCGTACTCCG
GCGGCACCTGGGACGCCGTACCGCTCAGCTCACCGCCGGCGGGCTTCGTG
GGATTGCTCGATACGAGCAGCAATCACAGCACTCGGAGCGGCAGGACACT
GGTCGAACATCTGAACAGTCGGGCCACGAATGGCGTCTTCGATCCGCCAT
TGACCAGTACGCCGGTGAAGTCGCCAGAGGATCCCAATGCGCCGCGACCG
AAACGCAAATATGCCGTCGGCAAGAACAGAGTAACTCGCTCGCGCAGTCC
AACCCAAGTGGTGAAGATCAAGCGTTTCCGCCGCATGAAGGCCAATGACC
GGGAGCGGAATCGGATGCATAACTTGAATGATGCCCTGGAGAAACTACGC
GTCACTCTGCCCTCGCTTCCCGAGGAGACGAAGCTGACGAAGATCGAGAT
TCTGCGATTTGCGCACAACTACATCTTTGCCCTGGAGCAGGTGCTGGAAA
GCGGAGGTTCAATCAACCTGGATCTGGAGAAGCTGCAGAACTTCACGCTG
AGTGGTGAGAGGATTACCAAGGAGCTCTTCGATGCTCTTTTCGTGAATCC
ACAGCCGTATCCCTTGGTCGGACGAATGTTCCCCTATGGACAGGGAATGG
CGCCTCTTGCACAGCACCAGACTGCTCCAGCATCGCACGCGGAGCAGCCG
CCGGCGATGGGTGGCTTTCAGCACGGCATGGACTATCGGCAGCAGCCACC
AGGATTCGACTTTACAGGCAGCATGCGGTTTTACCACCAA

BO01503.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:39:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7659-PA 1197 tap-RA 1..924 17..940 4570 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:06:53
Subject Length Description Subject Range Query Range Score Percent Strand
tap-RA 2130 CG7659-RA 111..1035 16..940 4595 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17359792..17360716 16..940 4595 99.8 Plus
Blast to na_te.dros performed on 2015-02-12 16:06:52 has no hits.

BO01503.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:31:51 Download gff for BO01503.5prime
Subject Subject Range Query Range Percent Splice Strand
tap-PA 1..922 17..938 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:30:36 Download gff for BO01503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7659-PA 1..922 17..938 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:24:33 Download gff for BO01503.5prime
Subject Subject Range Query Range Percent Splice Strand
tap-RA 111..1033 16..938 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:42:09 Download gff for BO01503.5prime
Subject Subject Range Query Range Percent Splice Strand
tap-RA 111..1033 16..938 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:42:09 Download gff for BO01503.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 17359792..17360714 16..938 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:24:33 Download gff for BO01503.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17352892..17353814 16..938 99   Plus

BO01503.complete Sequence

1228 bp (1228 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ629523

> BO01503.complete
GAAGTTATCAGTCGACATGGCCGCCTGCTACAATGCCTATAGCGCTGGAT
CACAGTCCTTCGAGTTCGACGAGGACGACGACGACGCCTCCTTCGACAGT
GGCTACGAGAAGAGTTTCGAGACGGAGGCCCAGTTGAGCTCACGACGCCG
CTTGGACTTTGGCACTCCGCCGACTCCGGCGATCCCGCAACCGTACTCCG
GCGGCACCTGGGACGCCGTACCGCTCAGCTCACCGCCGGCGGGCTTCGTG
GGATTGCTCGATACGAGCAGCAATCACAGCACTCGGAGCGGCAGGACACT
GGTCGAACATCTGAACAGTCGGGCCACGAATGGCGTCTTCGATCCGCCAT
TGACCAGTACGCCGGTGAAGTCGCCAGAGGATCCCAATGCGCCGCGACCG
AAACGCAAATATGCCGTCGGCAAGAACAGAGTAACTCGCTCGCGCAGTCC
AACCCAAGTGGTGAAGATCAAGCGTTTCCGCCGCATGAAGGCCAATGACC
GGGAGCGGAATCGGATGCATAACTTGAATGATGCCCTGGAGAAACTACGC
GTCACTCTGCCCTCGCTTCCCGAGGAGACGAAGCTGACGAAGATCGAGAT
TCTGCGATTTGCGCACAACTACATCTTTGCCCTGGAGCAGGTGCTGGAAA
GCGGAGGTTCAATCAACCTGGATCTGGAGAAGCTGCAGAACTTCACGCTG
AGTGGTGAGAGGATTACCAAGGAGCTCTTCGATGCTCTTTTCGTGAATCC
ACAGCCGTATCCCTTGTTCGGACGAATGTTCCCCTATGGACAGGGAATGG
CGCCTCTTGCACAGCACCAGACTGCTCCAGCATCGCACGCGGAGCAGCCG
CCGGCGATGGGTGGCTTTCAGCACGGCATGGACTATCCGCAGCAGCCACC
AGGATTCGACTTTACAGGCAGCATGCGGTTTTACCACCAACAGCAACAGC
AGCCGCATCAGCCTCACCATCTGCAGCCTAATCCCCAGCAGGAGTCCAGC
CCGCAGCAGTTCTCGCAGGAGAAATACGATCTGTTCAGGGGATCCTTCGA
TGCAGCTGCCAATCTTCATTCTACGAACTTGGATTCTGGGATTCACCAGC
AGAGCAGCTTCTACTCGCAAACACCGCCATGGAAGGACTATCCGGAGGAT
CAGGCACACGTGCATCCCGTTCCACATCAACACAGCTACAAAAACTTCGC
CCCGCAGGTGGCAAGCTTTCTAGACCAT

BO01503.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
tap-RA 1197 CG7659-PA 1..1194 17..1210 5970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
tap-RA 2130 CG7659-RA 111..1305 16..1210 5975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17359792..17360986 16..1210 5975 100 Plus
Blast to na_te.dros performed 2014-11-28 00:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6710..6835 904..1033 162 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6795..6856 933..994 148 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2262..2380 874..993 146 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6819 933..993 143 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2289..2431 848..990 138 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2326..2422 933..1026 136 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6864 878..1029 131 59.6 Plus
roo 9092 roo DM_ROO 9092bp 1089..1146 933..990 128 69 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 966..1029 929..994 127 70.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6843 933..1026 120 61.7 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7928..7994 911..977 119 64.2 Plus
TART-C 11124 TART-C TARTC 11124bp 9372..9438 911..977 119 64.2 Plus
roo 9092 roo DM_ROO 9092bp 1057..1145 883..977 118 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6813..6857 933..977 117 73.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2389 943..1026 114 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2353..2414 933..994 112 64.5 Plus
roo 9092 roo DM_ROO 9092bp 1122..1163 933..974 111 73.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2465 869..1009 110 59.7 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3265..3336 917..989 110 63 Plus

BO01503.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:45:42 Download gff for BO01503.complete
Subject Subject Range Query Range Percent Splice Strand
tap-RA 1..1197 17..1211 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:16:22 Download gff for BO01503.complete
Subject Subject Range Query Range Percent Splice Strand
tap-RA 143..1348 16..1219 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:29:30 Download gff for BO01503.complete
Subject Subject Range Query Range Percent Splice Strand
tap-RA 112..1305 17..1212 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:45:43 Download gff for BO01503.complete
Subject Subject Range Query Range Percent Splice Strand
tap-RA 143..1348 16..1219 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:13 Download gff for BO01503.complete
Subject Subject Range Query Range Percent Splice Strand
tap-RA 112..1305 17..1212 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:13 Download gff for BO01503.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17359793..17360986 17..1212 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:29:30 Download gff for BO01503.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17352893..17354086 17..1212 99   Plus

BO01503.pep Sequence

Translation from 16 to 1228

> BO01503.pep
MAACYNAYSAGSQSFEFDEDDDDASFDSGYEKSFETEAQLSSRRRLDFGT
PPTPAIPQPYSGGTWDAVPLSSPPAGFVGLLDTSSNHSTRSGRTLVEHLN
SRATNGVFDPPLTSTPVKSPEDPNAPRPKRKYAVGKNRVTRSRSPTQVVK
IKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLPEETKLTKIEILRFAH
NYIFALEQVLESGGSINLDLEKLQNFTLSGERITKELFDALFVNPQPYPL
FGRMFPYGQGMAPLAQHQTAPASHAEQPPAMGGFQHGMDYPQQPPGFDFT
GSMRFYHQQQQQPHQPHHLQPNPQQESSPQQFSQEKYDLFRGSFDAAANL
HSTNLDSGIHQQSSFYSQTPPWKDYPEDQAHVHPVPHQHSYKNFAPQVAS
FLDH

BO01503.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:38:59
Subject Length Description Subject Range Query Range Score Percent Strand
tap-PA 398 CG7659-PA 1..398 1..398 2136 100 Plus
dimm-PB 390 CG8667-PB 108..214 91..212 156 36.9 Plus
dimm-PA 390 CG8667-PA 108..214 91..212 156 36.9 Plus