Clone BO01614 Report

Search the DGRC for BO01614

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:16
Well:14
Vector:pDNR-Dual
Associated Gene/Transcriptzfh1-RA
Protein status:BO01614.pep: validated full length
Sequenced Size:2275

Clone Sequence Records

BO01614.3prime Sequence

820 bp (747 high quality bases) assembled on 2005-11-30

> BO01614.3prime
ATGGTCTAGAAAGCTTGCTTCCCTGTAGGGCTTGCAATAGGAATACCGGT
GGTTCATGTGCTGGCTGTAGCTGCCCGAGTGCGAGAAGCGCTTCAGGCAC
TTGGAGCACTGAAAGGGCTTCTCGCCGCTGTGCAGACGCTTGTGCTCCGT
GAGGTGGTGCTTGTGCTTGAAGGCCTTCGGACACTCTATGCACTGGTAGG
GTCGTTGACCGGAATGCTCGTATTTGTGTCGCGCCAGCGAACTCTGCTTG
GCGAAGGCCTTGTCGCACTGATCGCACACATAGGGCAGATCGGGATCGCC
AGCGTGTCCATGGGTCTCCGCCTTGCCCCTACGCGGTTTCGGTGGCATCA
GAACGCCGGCGCCGAACTCGTCCTCGTGTGAGATGCGCGAGTCGTCGTCC
CGCCACGAACGCTTCTCCGATCCACCGGGACTCAAGCTGGTGCCCCGGTA
ATCGGGCAGCTTAATACTGTTCATCAAGGCATGGTTGGAAGCGAAGTCTC
CGCCCGGGCGCATCTTAAACAGCGCCTCCATGGGCAGCGACATGGGCAGC
ATGTAGGGAGGTAGTCCCGGAAAGGCCTGGCCACTGCGAGGAGTGGAATC
CAGTTGGCTATTTGGGGGCGAAGGCGGCGGGGCAGCACCAAAGTAGAGGG
CTGCCGCGGATGACGGTGAAAATCGAGGCCGGCGACATCGATGCGGATGT
GGAGAACTTCCTGCTGAGATTGATTGCTTCGGGATTGAGGGCTTCTCCCG
ACGGTGGAGCTATATACGGAGGCGAGCTCTCACTCTTCGGCGTGAGGGGA
TCTCTCTTCACGGACAAGTC

BO01614.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:41:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG1322-PA 2244 zfh1-RA 1589..2241 671..19 3265 100 Minus
CG1322-PB 3165 zfh1-RB 2510..3162 671..19 3265 100 Minus
CG1322-PC 2580 zfh1-RC 1925..2577 671..19 3265 100 Minus
CG1322-PA 2244 zfh1-RA 1441..1591 820..670 755 100 Minus
CG1322-PB 3165 zfh1-RB 2362..2512 820..670 755 100 Minus
CG1322-PC 2580 zfh1-RC 1777..1927 820..670 755 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:19:36
Subject Length Description Subject Range Query Range Score Percent Strand
zfh1-RB 6522 CG1322-RB 2720..3520 820..19 3985 99.9 Minus
zfh1-RA 3560 CG1322-RA 1783..2583 820..19 3985 99.9 Minus
zfh1-RE 6522 CG1322-RE 2720..3520 820..19 3985 99.9 Minus
zfh1-RB 6522 CG1322-RB 1442..1550 177..69 200 80 Minus
zfh1-RA 3560 CG1322-RA 505..613 177..69 200 80 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30785332..30785943 820..208 3015 99.8 Minus
3R 32079331 3R 30786009..30786200 210..19 960 100 Minus
3R 32079331 3R 30784054..30784162 177..69 200 78.9 Minus
Blast to na_te.dros performed on 2015-02-09 18:19:34 has no hits.

BO01614.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:34:00 Download gff for BO01614.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1322-PC 1777..2580 18..820 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:33:51 Download gff for BO01614.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1322-PC 1777..2580 18..820 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 03:55:01 Download gff for BO01614.3prime
Subject Subject Range Query Range Percent Splice Strand
zfh1-RE 2720..3520 19..820 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:10:00 Download gff for BO01614.3prime
Subject Subject Range Query Range Percent Splice Strand
zfh1-RE 2720..3520 19..820 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:10:00 Download gff for BO01614.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 30785332..30785941 210..820 99 -> Minus
3R 30786010..30786200 19..209 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 03:55:01 Download gff for BO01614.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26611054..26611663 210..820 99 -> Minus
arm_3R 26611732..26611922 19..209 100   Minus

BO01614.5prime Sequence

731 bp (659 high quality bases) assembled on 2005-11-30

> BO01614.5prime
GAAGTTATCAGTCGACATGTCGGCGGCCGCTTGCCTACTGTCTTCTTCTA
CTTCTTCGTTCGAGAAGACCTGCCGCATCTGCCACAAGGCCTTCGCGAAC
GTCTACCGCCTGCAGAGGCACATGATCAGCCACGACGAGAGTGCGCTGCT
GCGGAAGTTTAAGTGCAAGGAGTGCGACAAGGCCTTCAAGTTCAAGCACC
ACCTCAAGGAGCACGTGAGGATCCATTCCGGCGAGAAGCCCTTCGGATGC
GACAACTGCGGCAAGCGATTCTCGCACTCGGGCAGCTTCTCCTCCCACAT
GACCTCCAAGAAGTGCATCAGCATGGGCCTCAAGCTGAACAACAATCGCG
CTCTGCTGAAGCGACTGGAGAAGAGCCCGGGATCCGCATCCTCCGCATCC
CGGCGATCGCCCTCCGATCACGGAAAGGGCAAGCTGCCGGAGCAGCCGTC
GCTACCGGGACTACCACATCCGATGAGCTACTTCGCCAGCGATGCGCAGG
TGCAAGGTGGAAGTGCGGCACCCGCGCCCTTCCCGCCATTCCATCCGAAC
TACATGAACGCGGCCCTGCTCGCCTTTCCCCACAACTTTATGGCGGCTGC
AGCTGGCCTGGATCCTCGGGTGCATCCCTACAGCATCCAGAGGCTGCTGC
AACTTTCCGCCGCCGGTCAGCAGCAGAGGGAGGAGGAGCGTGAGGAGCAG
CAAAAGCAGCAGCAGCATGATGAGGAGGAGA

BO01614.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:41:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG1322-PA 2244 zfh1-RA 1..715 17..731 3575 100 Plus
CG1322-PB 3165 zfh1-RB 971..1636 66..731 3330 100 Plus
CG1322-PC 2580 zfh1-RC 971..1029 66..124 295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:25:16
Subject Length Description Subject Range Query Range Score Percent Strand
zfh1-RA 3560 CG1322-RA 343..1057 17..731 3575 100 Plus
zfh1-RB 6522 CG1322-RB 1329..1994 66..731 3330 100 Plus
zfh1-RE 6522 CG1322-RE 1329..1994 66..731 3330 100 Plus
zfh1-RA 3560 CG1322-RA 2425..2533 179..287 200 80 Plus
zfh1-RB 6522 CG1322-RB 3362..3470 179..287 200 80 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30783941..30784606 66..731 3330 100 Plus
3R 32079331 3R 30783600..30783650 17..67 255 100 Plus
3R 32079331 3R 30786042..30786150 179..287 200 78.9 Plus
Blast to na_te.dros performed on 2015-02-11 04:25:13 has no hits.

BO01614.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:34:01 Download gff for BO01614.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1322-PA 1..714 17..730 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:33:53 Download gff for BO01614.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1322-PA 1..714 17..730 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 05:01:43 Download gff for BO01614.5prime
Subject Subject Range Query Range Percent Splice Strand
zfh1-RA 333..1056 6..730 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:12:01 Download gff for BO01614.5prime
Subject Subject Range Query Range Percent Splice Strand
zfh1-RA 333..1056 6..730 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:12:01 Download gff for BO01614.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30783590..30783650 6..67 92 -> Plus
3R 30783943..30784605 68..730 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 05:01:43 Download gff for BO01614.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26609312..26609372 6..67 92 -> Plus
arm_3R 26609665..26610327 68..730 100   Plus

BO01614.complete Sequence

2275 bp assembled on 2007-03-23

GenBank Submission: FJ629549

> BO01614.complete
GAAGTTATCAGTCGACATGTCGGCGGCCGCTTGCCTACTGTCTTCTTCTA
CTTCTTCGTTCGAGAAGACCTGCCGCATCTGCCACAAGGCCTTCGCGAAC
GTCTACCGCCTGCAGAGGCACATGATCAGCCACGACGAGAGTGCGCTGCT
GCGGAAGTTTAAGTGCAAGGAGTGCGACAAGGCCTTCAAGTTCAAGCACC
ACCTCAAGGAGCACGTGAGGATCCATTCCGGCGAGAAGCCCTTCGGATGC
GACAACTGCGGCAAGCGATTCTCGCACTCGGGCAGCTTCTCCTCCCACAT
GACCTCCAAGAAGTGCATCAGCATGGGCCTCAAGCTGAACAACAATCGCG
CTCTGCTGAAGCGACTGGAGAAGAGCCCGGGATCCGCATCCTCCGCATCC
CGGCGATCGCCCTCCGATCACGGAAAGGGCAAGCTGCCGGAGCAGCCGTC
GCTACCGGGACTACCACATCCGATGAGCTACTTCGCCAGCGATGCGCAGG
TGCAAGGTGGAAGTGCGGCACCCGCGCCCTTCCCGCCATTCCATCCGAAC
TACATGAACGCGGCCCTGCTCGCCTTTCCCCACAACTTTATGGCGGCTGC
AGCTGGCCTGGATCCTCGGGTGCATCCCTACAGCATCCAGAGGCTGCTGC
AACTTTCCGCCGCCGGTCAGCAGCAGAGGGAGGAGGAGCGTGAGGAGCAG
CAAAAGCAGCAGCAGCATGATGAGGAGGAGACCCCCGATGAGCCCAAGCT
AGTGATGGATATCGAGGAGCCAGAGACCAAGGAGATGGCACCCACGCCAG
AGGCCACCGAAGCAGCCACTCCCATTAAGCGGGAGGAGAGCAGGGAAGCC
TCTCCCGATCCAGAGAGCTACCGTTCCTCCTCGCAAGCAATCAAACAAGA
GCAGGAGCCCCTGAACGTAGCAGAGGAACGTCAAACTCCTGTGGAAGAAC
ACGCCCCCGTGGAGCATGCCGCTGATCTGCGCTGCAGTCGCTGCTCCAAG
CAGTTCAATCATCCCACTGAGCTGGTGCAGCACGAGAAGGTGCTTTGTGG
CCTGATCAAGGAGGAGCTGGAGCAGCACTTCCAACAGCAACAGGCCACGT
CCTTTGCCTTGGCCTCCGCCAGCGAAGAGGACGAGGAAGACGAGGAGATG
GATGTGGAGGAGGAGCCCCGCCAGGAGAGTGGCGAACGGAAAGTCCGCGT
GCGAACGGCCATCAACGAGGAGCAGCAGCAGCAGTTGAAGCAGCACTACT
CCCTGAACGCTCGACCCAGTAGGGATGAGTTCCGAATGATAGCAGCTCGT
CTGCAGCTGGATCCCCGAGTGGTTCAAGTGTGGTTCCAGAACAACCGCTC
CAGGGAGCGCAAAATGCAGAGTTTCCAGAACAATCAGGCGGCAGGCGCAG
CACCGCCAATGCCCATTGACTCCCAGGCATCTCTAACCCGGGAGGATCAA
CCGCTGGACTTGTCCGTGAAGAGAGATCCCCTCACGCCGAAGAGTGAGAG
CTCGCCTCCGTATATAGCTCCACCGTCGGGAGAAGCCCTCAATCCCGAAG
CAATCAATCTCAGCAGGAAGTTCTCCACATCCGCATCGATGTCGCCGGCC
TCGATTTCACCGTCATCCGCGGCAGCCCTCTACTTTGGTGCTGCCCCGCC
GCCTTCGCCCCCAAATAGCCAACTGGATTCCACTCCTCGCAGTGGCCAGG
CCTTTCCGGGACTACCTCCCTACATGCTGCCCATGTCGCTGCCCATGGAG
GCGCTGTTTAAGATGCGCCCGGGCGGAGACTTCGCTTCCAACCATGCCTT
GATGAACAGTATTAAGCTGCCCGATTACCGGGGCACCAGCTTGAGTCCCG
GTGGATCGGAGAAGCGTTCGTGGCGGGACGACGACTCGCGCATCTCACAC
GAGGACGAGTTCGGCGCCGGCGTTCTGATGCCACCGAAACCGCGTAGGGG
CAAGGCGGAGACCCATGGACACGCTGGCGATCCCGATCTGCCCTATGTGT
GCGATCAGTGCGACAAGGCCTTCGCCAAGCAGAGTTCGCTGGCGCGACAC
AAATACGAGCATTCCGGTCAACGACCCTACCAGTGCATAGAGTGTCCGAA
GGCCTTCAAGCACAAGCACCACCTCACGGAGCACAAGCGTCTGCACAGCG
GCGAGAAGCCCTTTCAGTGCTCCAAGTGCCTGAAGCGCTTCTCGCACTCG
GGCAGCTACAGCCAGCACATGAACCACCGGTATTCCTATTGCAAGCCCTA
CAGGGAAGCAAGCTTTCTAGACCAT

BO01614.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:46:33
Subject Length Description Subject Range Query Range Score Percent Strand
zfh1-RA 2244 CG1322-PA 1..2241 17..2257 11205 100 Plus
zfh1-RB 3165 CG1322-PB 971..3162 66..2257 10960 100 Plus
zfh1-RE 3621 CG1322-PE 971..3162 66..2257 10960 100 Plus
zfh1-RA 2244 CG1322-PA 163..271 2099..2207 200 78.9 Plus
zfh1-RA 2244 CG1322-PA 2083..2191 179..287 200 78.9 Plus
zfh1-RB 3165 CG1322-PB 1084..1192 2099..2207 200 78.9 Plus
zfh1-RB 3165 CG1322-PB 3004..3112 179..287 200 78.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
zfh1-RA 3560 CG1322-RA 343..2583 17..2257 11205 100 Plus
zfh1-RB 6522 CG1322-RB 1329..3520 66..2257 10960 100 Plus
zfh1-RE 6522 CG1322-RE 1329..3520 66..2257 10960 100 Plus
zfh1-RA 3560 CG1322-RA 505..613 2099..2207 200 78.9 Plus
zfh1-RA 3560 CG1322-RA 2425..2533 179..287 200 78.9 Plus
zfh1-RB 6522 CG1322-RB 1442..1550 2099..2207 200 78.9 Plus
zfh1-RB 6522 CG1322-RB 3362..3470 179..287 200 78.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:46:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30783941..30785943 66..2068 10015 100 Plus
3R 32079331 3R 30786009..30786200 2066..2257 960 100 Plus
3R 32079331 3R 30783600..30783650 17..67 255 100 Plus
3R 32079331 3R 30784054..30784162 2099..2207 200 78.9 Plus
3R 32079331 3R 30786042..30786150 179..287 200 78.9 Plus
Blast to na_te.dros performed on 2014-11-26 21:46:32 has no hits.

BO01614.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:11:38 Download gff for BO01614.complete
Subject Subject Range Query Range Percent Splice Strand
zfh1-RA 1..2244 17..2258 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:29:52 Download gff for BO01614.complete
Subject Subject Range Query Range Percent Splice Strand
zfh1-RA 333..2583 6..2257 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:36:18 Download gff for BO01614.complete
Subject Subject Range Query Range Percent Splice Strand
zfh1-RA 343..2583 17..2259 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:11:38 Download gff for BO01614.complete
Subject Subject Range Query Range Percent Splice Strand
zfh1-RA 333..2583 6..2257 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:41:56 Download gff for BO01614.complete
Subject Subject Range Query Range Percent Splice Strand
zfh1-RA 343..2583 17..2259 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:41:56 Download gff for BO01614.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30783600..30783650 17..67 100 -> Plus
3R 30783943..30785941 68..2066 100 -> Plus
3R 30786010..30786200 2067..2259 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:36:18 Download gff for BO01614.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26609322..26609372 17..67 100 -> Plus
arm_3R 26609665..26611663 68..2066 100 -> Plus
arm_3R 26611732..26611922 2067..2259 98   Plus

BO01614.pep Sequence

Translation from 16 to 2275

> BO01614.pep
MSAAACLLSSSTSSFEKTCRICHKAFANVYRLQRHMISHDESALLRKFKC
KECDKAFKFKHHLKEHVRIHSGEKPFGCDNCGKRFSHSGSFSSHMTSKKC
ISMGLKLNNNRALLKRLEKSPGSASSASRRSPSDHGKGKLPEQPSLPGLP
HPMSYFASDAQVQGGSAAPAPFPPFHPNYMNAALLAFPHNFMAAAAGLDP
RVHPYSIQRLLQLSAAGQQQREEEREEQQKQQQHDEEETPDEPKLVMDIE
EPETKEMAPTPEATEAATPIKREESREASPDPESYRSSSQAIKQEQEPLN
VAEERQTPVEEHAPVEHAADLRCSRCSKQFNHPTELVQHEKVLCGLIKEE
LEQHFQQQQATSFALASASEEDEEDEEMDVEEEPRQESGERKVRVRTAIN
EEQQQQLKQHYSLNARPSRDEFRMIAARLQLDPRVVQVWFQNNRSRERKM
QSFQNNQAAGAAPPMPIDSQASLTREDQPLDLSVKRDPLTPKSESSPPYI
APPSGEALNPEAINLSRKFSTSASMSPASISPSSAAALYFGAAPPPSPPN
SQLDSTPRSGQAFPGLPPYMLPMSLPMEALFKMRPGGDFASNHALMNSIK
LPDYRGTSLSPGGSEKRSWRDDDSRISHEDEFGAGVLMPPKPRRGKAETH
GHAGDPDLPYVCDQCDKAFAKQSSLARHKYEHSGQRPYQCIECPKAFKHK
HHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYREASF
LDH

BO01614.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:35:41
Subject Length Description Subject Range Query Range Score Percent Strand
zfh1-PA 747 CG1322-PA 1..747 1..747 3965 100 Plus
zfh1-PB 1054 CG1322-PB 317..1054 10..747 3893 99.1 Plus
zfh1-PE 1206 CG1322-PE 317..1054 10..747 3893 99.1 Plus
gl-PA 604 CG7672-PA 308..568 490..735 245 29.9 Plus
gl-PC 679 CG7672-PC 308..568 490..735 245 29.9 Plus
zfh1-PB 1054 CG1322-PB 315..405 651..738 240 51.6 Plus
zfh1-PE 1206 CG1322-PE 315..405 651..738 240 51.6 Plus
gl-PA 604 CG7672-PA 439..545 19..122 178 33.6 Plus
gl-PA 604 CG7672-PA 495..568 19..95 161 40.3 Plus