Clone BO01626 Report

Search the DGRC for BO01626

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:16
Well:26
Vector:pDNR-Dual
Associated Gene/Transcriptovo-RA
Protein status:BO01626.pep: validated full length
Sequenced Size:2959

Clone Sequence Records

BO01626.3prime Sequence

824 bp (741 high quality bases) assembled on 2005-11-30

> BO01626.3prime
ATGGTCTAGAAAGCTTGCATTGTGGACTGGCATGGGCAGCTGGCCGAGCA
GATTGTTGGCGAACTGCGAGTTGGTGAACTTAAAGTGCCGCTTGTCGTAG
AACTTAAGCAGCGCCGGCGAGAACGGATGGTTGTTCTTCAGGTGCAGATA
GTGGACCTCCGGCTCGCAGGTGGTGTGTCCGCACTCCTCGCACACGTACA
TCTTGGCTCTGCGCTCCTTGTAGGCATACTGGTGCTGAACGCTATGCACC
TTCTGGCAGTGCGACTCGAGGGAACAGCGCTGCGTGAAGCTCTTCTCGCA
GAGATTGCACTTGTACGGCCGGACGCCCGTGTGGGTGCGCGTGTGGCGCT
TGAGGTCGAAGGTGTCGTTGAATCCCTTGCCGCAGAACGTGCACAGATAC
CGCTTGATGTCCGAGTGACACTTCATGTGCCGATTGAGCAGGCGCTGCAG
CGAGAATGTCTTCATGCAGACGCGGCAGACGAACTTATTGTTGCCCGACG
ACGAATCCTCATTGGCTCCGCCGGATGAGCCCATGCAAAGGGCTTCGGCG
GATCCATGACTGCTGGCATTGCTGCTTGCACTGCTGTTACTGTGGTGCTG
ATGGTGCTGCTGCTGCTGTTGCTGCTGCAGGGATTGCTGCTGTTGCACCG
ACTGCTGTTGCACCGATTGTTGCATATTTTGCTGCTGCGGCGAGCCCTGC
TGCTGTTGGTGCTGCGAGTGGTGGCCATGCTTGCTGAGATCATNNCATGC
ATCGATGTTGCGAATTCNGTGATGGCCACCGTGGGCATTCTCCCACGCCA
GCGGGTTCTTAATGCCATGGCCGC

BO01626.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:41:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG6824-PA 2928 ovo-RA 2201..2925 743..19 3625 100 Minus
CG6824-PB 4056 ovo-RB 3329..4053 743..19 3625 100 Minus
CG6824-PC 3669 ovo-RC 2942..3666 743..19 3625 100 Minus
CG6824-PD 3087 ovo-RD 2360..3084 743..19 3625 100 Minus
CG6824-PA 2928 ovo-RA 2151..2193 793..751 196 97.6 Minus
CG6824-PB 4056 ovo-RB 3279..3321 793..751 196 97.6 Minus
CG6824-PC 3669 ovo-RC 2892..2934 793..751 196 97.6 Minus
CG6824-PD 3087 ovo-RD 2310..2352 793..751 196 97.6 Minus
CG6824-PA 2928 ovo-RA 2120..2147 824..797 140 100 Minus
CG6824-PB 4056 ovo-RB 3248..3275 824..797 140 100 Minus
CG6824-PC 3669 ovo-RC 2861..2888 824..797 140 100 Minus
CG6824-PD 3087 ovo-RD 2279..2306 824..797 140 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
ovo-RE 6763 CG6824-RE 4106..4911 824..19 3907 99.1 Minus
ovo-RD 5948 CG6824-RD 3448..4253 824..19 3907 99.1 Minus
ovo-RC 5518 CG6824-RC 2861..3666 824..19 3907 99.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 14:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5068176..5068798 824..202 2962 98.2 Minus
X 23542271 X 5068893..5069077 203..19 925 100 Minus
Blast to na_te.dros performed 2015-02-13 14:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6900 736..561 339 69.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6867 710..561 304 68.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2511 723..542 266 63.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..6915 736..582 265 66.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2793..2966 736..560 264 64.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2512 736..561 256 62.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2461 715..570 247 66 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..6921 736..593 231 63.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2766..2922 736..562 211 64.6 Minus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 628..737 618..728 211 70.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2375..2535 737..583 207 62.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6815..6977 736..575 199 60.4 Minus
roo 9092 roo DM_ROO 9092bp 1064..1165 723..619 176 64.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6846..7003 731..576 145 56.3 Minus
gypsy11 4428 gypsy11 GYPSY11 4428bp 948..1006 737..677 129 70.5 Minus

BO01626.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:34:07 Download gff for BO01626.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6824-PA 2120..2928 18..824 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:34:01 Download gff for BO01626.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6824-PA 2120..2928 18..824 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 10:58:03 Download gff for BO01626.3prime
Subject Subject Range Query Range Percent Splice Strand
ovo-RC 2861..3671 11..824 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:38:30 Download gff for BO01626.3prime
Subject Subject Range Query Range Percent Splice Strand
ovo-RC 2861..3671 11..824 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:38:30 Download gff for BO01626.3prime
Subject Subject Range Query Range Percent Splice Strand
X 5068176..5068798 202..824 98 -> Minus
X 5068895..5069082 11..201 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 10:58:03 Download gff for BO01626.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4962209..4962831 202..824 98 -> Minus
arm_X 4962928..4963115 11..201 97   Minus

BO01626.5prime Sequence

761 bp (728 high quality bases) assembled on 2005-11-30

> BO01626.5prime
GAAGTTATCAGTCGACATGGGCGGTGGTCGCGACGGCCGAGGGAACTACG
GACCCAATTCACCGCCAACGGGAGCATTGCCTCCGTTTTATGAGAGCCTC
AAGAGCGGCCAACAGAGCACGGCCAGCAACAATACGGGCCAAAGTCCCGG
CGCTAATCATTCGCATTTCAACGCAAATCCAGCGAATTTTCTGCAAAACG
CAGCAGCGGCTGCGTACATCATGTCGGCAGGTTCCGGTGGAGGAGGCTGC
ACCGGAAACGGAGGTGGTGGAGCATCGGGGCCAGGAGGTGGCCCATCGGC
AAATAGTGGTGGTGGTGGTGGTGGTGGCGGCGGCAATGGGTACATCAACT
GTGGTGGTGTTGGTGGTCCAAACAATAGTCTCGACGCCTACGGCATAATA
CTCAAGGATGAACCGGACATTGAGTACGACGAGGCCAAGATCGATATTGG
CACCTTTGCGCAGAACATTATCCAGGCAACGATGGGCAGCTCCGGTCAGT
TCAATGCCAGCGCCTATGAGGATGCTATAATGTCGGACCTGGCCAGTTCG
GGTCAGTGTCCCAATGGAGCCGTCGATCCGCTTCAGTTCACAGCCACTCT
GATGCTGAGTTCGCAGACCGATCATTTACTGGAGCAGCTGTCCGATGCCG
TGGACTTGAGTTCATTCCTGCAAAGGAGCTGCGTGGACGACGAGGAGTCC
ACCAGTCCGCGGCAGGATTTCGAGCTGGTGTCCACGCCCTCGCTAACGCC
GGATTCAGTGA

BO01626.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG6824-PA 2928 ovo-RA 1..745 17..761 3725 100 Plus
CG6824-PB 4056 ovo-RB 2032..2407 386..761 1880 100 Plus
CG6824-PC 3669 ovo-RC 1645..2020 386..761 1880 100 Plus
CG6824-PD 3087 ovo-RD 529..904 386..761 1880 100 Plus
CG6824-PB 4056 ovo-RB 1504..1873 17..386 1850 100 Plus
CG6824-PC 3669 ovo-RC 1117..1486 17..386 1850 100 Plus
CG6824-PD 3087 ovo-RD 1..370 17..386 1850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
ovo-RA 5946 CG6824-RA 1170..1914 17..761 3725 100 Plus
ovo-RE 6763 CG6824-RE 2890..3265 386..761 1880 100 Plus
ovo-RD 5948 CG6824-RD 1698..2073 386..761 1880 100 Plus
ovo-RE 6763 CG6824-RE 2362..2731 17..386 1850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:04:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5066072..5066447 386..761 1880 100 Plus
X 23542271 X 5065544..5065913 17..386 1850 100 Plus
Blast to na_te.dros performed on 2015-02-11 22:04:10 has no hits.

BO01626.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:34:07 Download gff for BO01626.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6824-PA 1..744 17..760 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:34:03 Download gff for BO01626.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6824-PA 1..744 17..760 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:32:36 Download gff for BO01626.5prime
Subject Subject Range Query Range Percent Splice Strand
ovo-RA 1165..1913 11..760 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:57:17 Download gff for BO01626.5prime
Subject Subject Range Query Range Percent Splice Strand
ovo-RA 1165..1913 11..760 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:57:17 Download gff for BO01626.5prime
Subject Subject Range Query Range Percent Splice Strand
X 5066073..5066446 387..760 100   Plus
X 5065539..5065913 11..386 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:32:36 Download gff for BO01626.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4959572..4959946 11..386 99 -> Plus
arm_X 4960106..4960479 387..760 100   Plus

BO01626.complete Sequence

2959 bp assembled on 2006-11-03

GenBank Submission: FJ629551

> BO01626.complete
GAAGTTATCAGTCGACATGGGCGGTGGTCGCGACGGCCGAGGGAACTACG
GACCCAATTCACCGCCAACGGGAGCATTGCCTCCGTTTTATGAGAGCCTC
AAGAGCGGCCAACAGAGCACGGCCAGCAACAATACGGGCCAAAGTCCCGG
CGCTAATCATTCGCATTTCAACGCAAATCCAGCGAATTTTCTGCAAAACG
CAGCAGCGGCTGCGTACATCATGTCGGCAGGTTCCGGTGGAGGAGGCTGC
ACCGGAAACGGAGGTGGTGGAGCATCGGGGCCAGGAGGTGGCCCATCGGC
AAATAGTGGTGGTGGTGGTGGTGGTGGCGGCGGCAATGGGTACATCAACT
GTGGTGGTGTTGGTGGTCCAAACAATAGTCTCGACGCCTACGGCATAATA
CTCAAGGATGAACCGGACATTGAGTACGACGAGGCCAAGATCGATATTGG
CACCTTTGCGCAGAACATTATCCAGGCAACGATGGGCAGCTCCGGTCAGT
TCAATGCCAGCGCCTATGAGGATGCTATAATGTCGGACCTGGCCAGTTCG
GGTCAGTGTCCCAATGGAGCCGTCGATCCGCTTCAGTTCACAGCCACTCT
GATGCTGAGTTCGCAGACCGATCATTTACTGGAGCAGCTGTCCGATGCCG
TGGACTTGAGTTCATTCCTGCAAAGGAGCTGCGTGGACGACGAGGAGTCC
ACCAGTCCGCGGCAGGATTTCGAGCTGGTGTCCACGCCCTCGCTAACGCC
GGATTCAGTGACGCCGGTGGAGCAGCACAATACCAATACAACCCAGCTGG
ATGTCCTGCACGAGAATCTGTTGACGCAGCTGACCCACAATATAGTCCGG
GGCGGCAGCAATCAGCAGCAGCAGCACCATCAACAGCATGGTGTGCAGCA
GCAACAGCAGCAGCAGCATAGTGTGCAGCAGCAACAGCAGCACAATGTGC
AACAGCAGCATGGCGTGCAGCAGCAACATGTCCAGCAGCAACCACCGCCC
TCGTATCAGCATGCCACGCGTGGCCTGATGATGCAACAGCAGCCGCAGCA
CGGCGGCTATCAGCAGCAAGCTGCCATCATGTCGCAACAGCAGCAGCAAT
TGCTCAGCCAGCAGCAGCAGCAGTCGCACCACCAGCAGCAGCAGCAGCAG
CAACATGCCGCTGCCTACCAGCAGCACAACATCTATGCACAGCAGCAACA
GCAGCAGCAGCAGCAGCATCATCAACAGCAGCAACAGCAGCAACATCATC
ACTTCCACCACCAGCAACAACAGCAGCCACAGCCACAGTCGCATCATTCG
CACCATCATGGCCATGGTCATGACAACAGCAACATGTCGCTTCCCTCGCC
AACTGCGGCTGCAGCGGCGGCGGCCGCTGCTGCTGCTGCTGCGGCAGCCG
CAGCCGCTCATCTGCAGCGTCCGATGAGCAGCAGCAGCAGCTCCGGCGGC
ACCAATAGCAGCAACAGTAGCGGTGGCAGCAGCAACAGTCCGCTCCTAGA
TGCAAACGCTGCTGCGGCAGCTGCAGCTGCTTTGTTGGACACAAAGCCAC
TCATCCAAAGCGTAAGTAATCCAATTGGTCAGCCACTAAATACGCAATCA
CAGCAGCAAAAGCAGGGACAACAAATCACATTGATGAAGACCACTAGGTA
CACGGAATTCGTCGAGATGGTGTCCATGGACGTGACGGTCAAGCCAGAGC
TCTTTAGCGAGCTCAAGCCAGAAATGACCGAGATCACCGCCGAGGAGTTG
ACTTTGGAAGCAGAGACAACAGCAGCAGCGGCGGCAGCAGCAGCAGCAGC
AGCAGCTGCAACAACAACATCAGCAACAGAGGGAACTCAGGTTCTGGCAG
CAGCGCCGGCACCATTGTCATCCGGCAGAAAGCTGCGTGGACGCGCCAAG
GCTGTAGCCTATGGCTCCACAATGATTACGCTGATATCCACGCTGAAATC
GTCGCCAGAAGTGCCGGCCACCAAGACGGTGCACCGCACCACTTTGCGAT
CTTTGGCTACGGCGGCAGCGGCCACTGCAGCCGGTTTGCTGGCGCCATCG
CCCACCGTTTCCGTTTTGAATGAGAGCAAAGTCTTGCAGCGGCGCTTGGG
CTTGCCGCCGGATCTGCAGCTTGAGTTTGTGAACGGCGGCCATGGCATTA
AGAACCCGCTGGCCGTGGAGAATGCCCACGGTGGCCATCACCGAATTCGC
AACATCGATTGCATTGATGATCTCAGCAAGCATGGCCACCACTCGCAGCA
CCAACAGCAGCAGGGCTCGCCGCAGCAGCAAAATATGCAACAATCGGTGC
AACAGCAGTCGGTGCAACAGCAGCAATCCCTGCAGCAGCAACAGCAGCAG
CAGCACCATCAGCACCACAGTAACAGCAGTGCAAGCAGCAATGCCAGCAG
TCATGGATCCGCCGAAGCCCTTTGCATGGGCTCATCCGGCGGAGCCAATG
AGGATTCGTCGTCGGGCAACAATAAGTTCGTCTGCCGCGTCTGCATGAAG
ACATTCTCGCTGCAGCGCCTGCTCAATCGGCACATGAAGTGTCACTCGGA
CATCAAGCGGTATCTGTGCACGTTCTGCGGCAAGGGATTCAACGACACCT
TCGACCTCAAGCGCCACACGCGCACCCACACGGGCGTCCGGCCGTACAAG
TGCAATCTCTGCGAGAAGAGCTTCACGCAGCGCTGTTCCCTCGAGTCGCA
CTGCCAGAAGGTGCATAGCGTTCAGCACCAGTATGCCTACAAGGAGCGCA
GAGCCAAGATGTACGTGTGCGAGGAGTGCGGACACACCACCTGCGAGCCG
GAGGTCCACTATCTGCACCTGAAGAACAACCATCCGTTCTCGCCGGCGCT
GCTTAAGTTCTACGACAAGCGGCACTTTAAGTTCACCAACTCGCAGTTCG
CCAACAATCTGCTCGGCCAGCTGCCCATGCCAGTCCACAATGCAAGCTTT
CTAGACCAT

BO01626.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:28:34
Subject Length Description Subject Range Query Range Score Percent Strand
ovo-RA 2928 CG6824-PA 1..2925 17..2941 14625 100 Plus
ovo-RD 3087 CG6824-PD 529..3084 386..2941 12780 100 Plus
ovo-RE 4056 CG6824-PE 2032..3207 386..1561 5880 100 Plus
ovo-RD 3087 CG6824-PD 1..370 17..386 1850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:28:36
Subject Length Description Subject Range Query Range Score Percent Strand
ovo-RA 5946 CG6824-RA 1170..4094 17..2941 14625 100 Plus
ovo-RD 5948 CG6824-RD 1698..4253 386..2941 12780 100 Plus
ovo-RE 6763 CG6824-RE 2890..4065 386..1561 5880 100 Plus
ovo-RD 5948 CG6824-RD 1170..1539 17..386 1850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5066072..5067781 386..2095 8550 100 Plus
X 23542271 X 5068136..5068798 2096..2758 3315 100 Plus
X 23542271 X 5065544..5065913 17..386 1850 100 Plus
X 23542271 X 5068893..5069077 2757..2941 925 100 Plus
Blast to na_te.dros performed 2014-11-27 16:28:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2272..2539 1004..1293 431 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2965 1033..1623 349 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6900 2224..2399 339 69.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..7219 968..1469 322 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2625..3012 856..1261 316 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6867 2250..2399 304 68.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2511 2237..2418 266 63.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..6915 2224..2378 265 66.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2793..2966 2224..2400 264 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2512 2224..2399 256 62.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2384 1757..1829 248 82.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2461 2245..2390 247 66 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..6921 2224..2367 231 63.2 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 628..737 2342..2232 211 70.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2375..2535 2223..2377 207 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6815..6977 2224..2385 199 60.4 Plus
roo 9092 roo DM_ROO 9092bp 1064..1165 2237..2341 176 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6846..7003 2229..2384 145 56.3 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 948..1006 2223..2283 129 70.5 Plus

BO01626.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:32 Download gff for BO01626.complete
Subject Subject Range Query Range Percent Splice Strand
ovo-RA 1..2928 17..2942 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:14 Download gff for BO01626.complete
Subject Subject Range Query Range Percent Splice Strand
ovo-RA 1165..4099 11..2949 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:30 Download gff for BO01626.complete
Subject Subject Range Query Range Percent Splice Strand
ovo-RA 1170..4094 17..2943 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:32 Download gff for BO01626.complete
Subject Subject Range Query Range Percent Splice Strand
ovo-RA 1165..4099 11..2949 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:21 Download gff for BO01626.complete
Subject Subject Range Query Range Percent Splice Strand
ovo-RA 1170..4094 17..2943 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:19:21 Download gff for BO01626.complete
Subject Subject Range Query Range Percent Splice Strand
X 5065544..5065913 17..386 100 -> Plus
X 5066073..5067781 387..2095 100 -> Plus
X 5068136..5068798 2096..2758 100 -> Plus
X 5068895..5069077 2759..2943 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:30 Download gff for BO01626.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4959577..4959946 17..386 100 -> Plus
arm_X 4960106..4961814 387..2095 100 -> Plus
arm_X 4962169..4962831 2096..2758 100 -> Plus
arm_X 4962928..4963110 2759..2943 98   Plus

BO01626.pep Sequence

Translation from 16 to 2959

> BO01626.pep
MGGGRDGRGNYGPNSPPTGALPPFYESLKSGQQSTASNNTGQSPGANHSH
FNANPANFLQNAAAAAYIMSAGSGGGGCTGNGGGGASGPGGGPSANSGGG
GGGGGGNGYINCGGVGGPNNSLDAYGIILKDEPDIEYDEAKIDIGTFAQN
IIQATMGSSGQFNASAYEDAIMSDLASSGQCPNGAVDPLQFTATLMLSSQ
TDHLLEQLSDAVDLSSFLQRSCVDDEESTSPRQDFELVSTPSLTPDSVTP
VEQHNTNTTQLDVLHENLLTQLTHNIVRGGSNQQQQHHQQHGVQQQQQQQ
HSVQQQQQHNVQQQHGVQQQHVQQQPPPSYQHATRGLMMQQQPQHGGYQQ
QAAIMSQQQQQLLSQQQQQSHHQQQQQQQHAAAYQQHNIYAQQQQQQQQQ
HHQQQQQQQHHHFHHQQQQQPQPQSHHSHHHGHGHDNSNMSLPSPTAAAA
AAAAAAAAAAAAAAHLQRPMSSSSSSGGTNSSNSSGGSSNSPLLDANAAA
AAAAALLDTKPLIQSVSNPIGQPLNTQSQQQKQGQQITLMKTTRYTEFVE
MVSMDVTVKPELFSELKPEMTEITAEELTLEAETTAAAAAAAAAAAAATT
TSATEGTQVLAAAPAPLSSGRKLRGRAKAVAYGSTMITLISTLKSSPEVP
ATKTVHRTTLRSLATAAAATAAGLLAPSPTVSVLNESKVLQRRLGLPPDL
QLEFVNGGHGIKNPLAVENAHGGHHRIRNIDCIDDLSKHGHHSQHQQQQG
SPQQQNMQQSVQQQSVQQQQSLQQQQQQQHHQHHSNSSASSNASSHGSAE
ALCMGSSGGANEDSSSGNNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYL
CTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVH
SVQHQYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHPFSPALLKFYD
KRHFKFTNSQFANNLLGQLPMPVHNASFLDH

BO01626.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:31:06
Subject Length Description Subject Range Query Range Score Percent Strand
ovo-PA 975 CG6824-PA 1..975 1..975 5124 100 Plus
ovo-PD 1028 CG6824-PD 1..1028 1..975 5060 94.8 Plus
ovo-PE 1351 CG6824-PE 502..1073 1..519 2657 90.2 Plus
ovo-PC 1222 CG6824-PC 373..944 1..519 2657 90.2 Plus
ovo-PB 1351 CG6824-PB 502..1073 1..519 2657 90.2 Plus
ovo-PE 1351 CG6824-PE 828..1351 387..975 1648 60.4 Plus
ovo-PC 1222 CG6824-PC 699..1222 387..975 1648 60.4 Plus