BO02425.complete Sequence
628 bp (628 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ629561
> BO02425.complete
GAAGTTATCAGTCGACATGAGAATCCGGAGCAACCCAATGCCCAGCCGGA
TGGTGGACATCTTGTGCTTCCTCATCATTGCGGTCTTTCTCCCGGTGGTG
TTTATGTTCGAGATTGTGGTGGTGCTGCCTGCCTTCCATGAACCGGGTGG
CTTCTTCCACACCTTCACCTTTCTTATGGCCATGTTCCTGGTGTTTAACA
TCAAGGGAAACATGATTGCCTGCATGATGATTGACACAAGTGTAAATGTG
AAAAAGGTGGAACCACCATCGGATCAGTTGAATTGGCGTGAGTGCGGCGA
GTGCCAGAAGCTAGCACCACCCAGATCTTGGCATTGCAAGGCCTGCAAAG
TGTGCATTCTGAAGCGGGATCACCACTGTATCTACACCGGCTGCTGCATT
GGACTCAGAAACCATCGCTTCTTCATGGGCTTTATATTCTATCTCTTCGT
GGGATCAGTTTACGCACTGGTGTACAACTCCATATACATGTGGGTCATCC
ACGGCCACATCTACAGCAACTGGGTGACGGTGTTAAAACTCGCCTGCCCC
ATGTTACACCTGCTCTGGCTTATGGAGTCCTCCTCCTGGCCTACCATGTG
CCCATTGTTTGCAAGCTTTCTAGACCAT
BO02425.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:25:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10344-RA | 597 | CG10344-PA | 1..594 | 17..610 | 2970 | 100 | Plus |
| CG10344-RB | 837 | CG10344-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
| CG10344-RB | 837 | CG10344-PB | 604..652 | 562..610 | 245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:25:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10344-RA | 1132 | CG10344-RA | 64..658 | 16..610 | 2975 | 100 | Plus |
| CG10344-RB | 1190 | CG10344-RB | 64..610 | 16..562 | 2735 | 100 | Plus |
| CG10344-RB | 1190 | CG10344-RB | 668..716 | 562..610 | 245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:25:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22426313..22426627 | 562..248 | 1575 | 100 | Minus |
| 2R | 25286936 | 2R | 22426682..22426914 | 248..16 | 1165 | 100 | Minus |
| 2R | 25286936 | 2R | 22426207..22426255 | 610..562 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:25:22 has no hits.
BO02425.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:45:09 Download gff for
BO02425.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10344-RA | 1..597 | 17..614 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:15:45 Download gff for
BO02425.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10344-RA | 45..650 | 9..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:29 Download gff for
BO02425.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10344-RA | 65..658 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:45:09 Download gff for
BO02425.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10344-RA | 45..650 | 9..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:09 Download gff for
BO02425.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10344-RA | 65..658 | 17..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:09 Download gff for
BO02425.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22426205..22426254 | 563..612 | 96 | <- | Minus |
| 2R | 22426313..22426626 | 249..562 | 100 | <- | Minus |
| 2R | 22426682..22426913 | 17..248 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:29 Download gff for
BO02425.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18313710..18313759 | 563..612 | 96 | <- | Minus |
| arm_2R | 18313818..18314131 | 249..562 | 100 | <- | Minus |
| arm_2R | 18314187..18314418 | 17..248 | 100 | | Minus |
BO02425.pep Sequence
Translation from 16 to 628
> BO02425.pep
MRIRSNPMPSRMVDILCFLIIAVFLPVVFMFEIVVVLPAFHEPGGFFHTF
TFLMAMFLVFNIKGNMIACMMIDTSVNVKKVEPPSDQLNWRECGECQKLA
PPRSWHCKACKVCILKRDHHCIYTGCCIGLRNHRFFMGFIFYLFVGSVYA
LVYNSIYMWVIHGHIYSNWVTVLKLACPMLHLLWLMESSSWPTMCPLFAS
FLDH
BO02425.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:17:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10344-PA | 198 | CG10344-PA | 1..198 | 1..198 | 1104 | 100 | Plus |
| CG10344-PB | 278 | CG10344-PB | 1..197 | 1..200 | 1016 | 93.5 | Plus |
| CG4676-PA | 284 | CG4676-PA | 12..194 | 9..191 | 496 | 44.1 | Plus |
| CG18810-PA | 300 | CG18810-PA | 1..172 | 1..166 | 341 | 36.6 | Plus |
| CG4956-PA | 302 | CG4956-PA | 45..191 | 17..159 | 341 | 42.2 | Plus |
