Clone Sequence Records
BO02505.5prime Sequence
753 bp (752 high quality bases) assembled on 2007-01-04
> BO02505.5prime
GAAGTTATCAGTCGACATGCACAGCGAAAAACACACGCCGGATATTCGGG
AATTAATGCCCGTTAGGGAGCACAGGTGCGAGAGATGTCCGAGTCTTGTC
TTTGGCAACCTCAGTCACTATCAGCTGCACCTGCGACGGCGCCACCAGGA
GGTTATCCCACCCTCTGTGATCGGGCCAATTGTCGCATTCCATTGCCCCG
TGGAAAAGTGCATCTACCATGTGGCTACCAAGGGAGCCCGCAGCTTCACC
AGCTTGCGCTTGCTGCGACAGCACTACCAGAAGAGCCACCTGGACAAGAA
CTACAAGTGCCTGGCGTGCGGCGGGAAATTCCTGCTGCAGCACCATCTGG
AGAAGCATCAGTGCTCAAAACACAAGTGTCCAGTGTGTGAACTGACCTAC
AACAGCAAGGCTGGCCTCAGGACCCACATGCGGCGCAAGAACCATTTGGT
GCATCACGAATCCGACAAGGTTCCCATACCCTCGCTGGCCACATGGAAAA
GGCTGAATCCACAGCCAATTCCCGTTTCTGCAGATTCCTTAACCGCCCAC
AGTTTGAAAACAGGCAGTGATTTACATCCGTCAGAGGAATATATTAACAA
CCTGCCTTCCAACTTGGCGGGGGTTACTGAACTATATGCTGAAATACCCA
ATCCGGAGGCCAATATGCCCTCCACTCTTGAACTGGATACCAATTTACCG
GCTGCAGAGGAACATATTCTTTGTTTCCTGCCCATTATGGATGTGTCCTA
TGC
BO02505.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:43:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14962-PA | 1167 | CG14962-RA | 1..579 | 17..595 | 2870 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 04:13:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 2002 | CG14962-RB | 708..1449 | 12..753 | 3695 | 99.9 | Plus |
| Asciz-RA | 1303 | CG14962-RA | 9..750 | 12..753 | 3695 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 04:13:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3164339..3165080 | 753..12 | 3695 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-01-31 04:13:34 has no hits.
BO02505.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:36:12 Download gff for
BO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-PA | 1..579 | 17..595 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:37:00 Download gff for
BO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-PA | 1..579 | 17..595 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 20:55:07 Download gff for
BO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 1..750 | 2..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 05:27:08 Download gff for
BO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asciz-RA | 1..750 | 2..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 05:27:08 Download gff for
BO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3164339..3165089 | 1..753 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 20:55:07 Download gff for
BO02505.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3164339..3165089 | 1..753 | 99 | | Minus |
BO02505.complete Sequence
1198 bp (1198 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ629562
> BO02505.complete
GAAGTTATCAGTCGACATGCACAGCGAAAAACACACGCCGGATATTCGGG
AATTAATGCCCGTTAGGGAGCACAGGTGCGAGAGATGTCCGAGTCTTGTC
TTTGGCAACCTCAGTCACTATCAGCTGCACCTGCGACGGCGCCACCAGGA
GGTTATCCCACCCTCTGTGATCGGGCCAATTGTCGCATTCCATTGCCCCG
TGGAAAAGTGCATCTACCATGTGGCTACCAAGGGAGCCCGCAGCTTCACC
AGCTTGCGCTTGCTGCGACAGCACTACCAGAAGAGCCACCTGGACAAGAA
CTACAAGTGCCTGGCGTGCGGCGGGAAATTCCTGCTGCAGCACCATCTGG
AGAAGCATCAGTGCTCAAAACACAAGTGTCCAGTGTGTGAACTGACCTAC
AACAGCAAGGCTGGCCTCAGGACCCACATGCGGCGCAAGAACCATTTGGT
GCATCACGAATCCGACAAGGTTCCCATACCCTCGCTGGCCACATGGAAAA
GGCTGAATCCACAGCCAATTCCCGTTTCTGCAGATTCCTTAACCGCCCAC
AGTTTGAAAACAGGCAGTGATTTACATCCGTCAGAGGAATATATTAACAA
CCTGCCTTCCAACTTGGCGGGGGTTACTGAACTATATGCTGAAATACCCA
ATCCGGAGGCCAATATGCCCTCCACTCTTGAACTGGATACCAATTTACCG
GCTGCAGAGGAACATATTCTTTGTTTCCTGCCCATTATGGATGTGTCCTA
TGCGCTAGAGATGTCATCCCAGAAACTAGATATGGAAACACAAACGGAGG
AGGACGATCTGAATGAAATCAGGAACGAAGTGCTGGCGCCCTTGTTACGC
GATATAGAAACCCAAACGCCCGACACCAGAGGCGACATAGGAACGATGAC
CGATGATTTCCCAGAGGAACAGGAGCCTGTTGCGGTCGGAAGCCATTTCC
ACGCGTATTCAGAAACTGAACCTATGTTTGACTTGCAAACCTCTGCCCAC
ATGTACACCCAAACTTGCGACGATTTGTTTGAGGAACTGGGGCTGTCCCA
CATCCAAACCCAAACTCACTGGCCAGATGGTCTGTACAACACGCAGCACA
CGCAGACCTGCGATGAAATAATGGACGAACTCTTCCCCGACAACTTTCAG
TCGACTTGCACGCAAACCAGGTGGCTGGACGCAAGCTTTCTAGACCAT
BO02505.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:29:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 1167 | CG14962-PB | 1..1164 | 17..1180 | 5790 | 99.8 | Plus |
| Asciz-RA | 1167 | CG14962-PA | 1..1164 | 17..1180 | 5790 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:29:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 2002 | CG14962-RB | 708..1876 | 12..1180 | 5800 | 99.7 | Plus |
| Asciz-RA | 1303 | CG14962-RA | 9..1177 | 12..1180 | 5800 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:29:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3163912..3165080 | 1180..12 | 5800 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:29:57 has no hits.
BO02505.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:45:13 Download gff for
BO02505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 1..1167 | 17..1183 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:15:50 Download gff for
BO02505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 699..1882 | 1..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:00 Download gff for
BO02505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 14..1177 | 17..1182 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:45:14 Download gff for
BO02505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 699..1882 | 1..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:20:20 Download gff for
BO02505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asciz-RA | 14..1177 | 17..1182 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:20:20 Download gff for
BO02505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3163909..3165075 | 17..1182 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:00 Download gff for
BO02505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3163909..3165075 | 17..1182 | 99 | | Minus |
BO02505.pep Sequence
Translation from 16 to 1198
> BO02505.pep
MHSEKHTPDIRELMPVREHRCERCPSLVFGNLSHYQLHLRRRHQEVIPPS
VIGPIVAFHCPVEKCIYHVATKGARSFTSLRLLRQHYQKSHLDKNYKCLA
CGGKFLLQHHLEKHQCSKHKCPVCELTYNSKAGLRTHMRRKNHLVHHESD
KVPIPSLATWKRLNPQPIPVSADSLTAHSLKTGSDLHPSEEYINNLPSNL
AGVTELYAEIPNPEANMPSTLELDTNLPAAEEHILCFLPIMDVSYALEMS
SQKLDMETQTEEDDLNEIRNEVLAPLLRDIETQTPDTRGDIGTMTDDFPE
EQEPVAVGSHFHAYSETEPMFDLQTSAHMYTQTCDDLFEELGLSHIQTQT
HWPDGLYNTQHTQTCDEIMDELFPDNFQSTCTQTRWLDASFLDH
BO02505.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:31:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-PB | 388 | CG14962-PB | 1..388 | 1..388 | 2111 | 100 | Plus |
| Asciz-PA | 388 | CG14962-PA | 1..388 | 1..388 | 2111 | 100 | Plus |
