Clone Sequence Records
BO03369.3prime Sequence
744 bp (701 high quality bases) assembled on 2005-11-30
> BO03369.3prime
ATGGTCTAGAAAGCTTCTTTACCTCAGTGTCGTCTTCTTCCTGCTGCTGC
TGTCGCCCATTGGTGACGTTCCGGTTGTGTTGCTTGCGCGGATCGAAAGC
GTCCACAACGATTTGTTCGGTGCCCTTGATTTCGGCCCGACAGAAGGGGC
AGCCCTGTCCCTCGGAATCCACTTGCCAGGAGGTAAGGCAGGGAGTGCAC
AACAAGTGGCCACAGGGCTCGATGCGGATATCTTTGTCGTTCTCCGCACA
GATTTTGCACAGCTGAAAGGTGCTGCCCATTTCACAGTATAGTTCGTATT
GCTCTTGGGTAACGGTTATGTGGTCCTCTGTGGGACTTTGAACGGCAGAC
GACAGATCCGGATTGTACGCTTGGCCATCTGGGTACAAGTAGAAGCCCTC
TCGATGGCCATCGAGCAGCGCCTGGCACAGCGACTTGTTCTGAGGGATTG
TCTGCAGAATCTCTCCCTCGGCAGTTACGTAGCCGATGGCCCATTGGCCC
AATCGCGTGCAGGAGAGCCGGAAAACGTAGCTGCCCGCCTTGAGGATGTA
GCGCTGTAGGCGAGCCTTCACCTCGTCGTATGTGAGAAACGCCACGTAGC
CCGGATGTGTGACGGCCAGAATCTGCCAGTTGCGTAGCAGGGTCACCCAA
GGCTGGAAGAGGCGTGTGAAGACGTCGAACTCGAAGTTGGAAATGAAGTC
GTTGCAGGTAAGATCGATAGTGGTCTTTAGGGCCATGGCCTCCA
BO03369.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:48:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7037-PA | 1347 | Cbl-RA | 620..1344 | 744..20 | 3625 | 100 | Minus |
CG7037-PB | 2637 | Cbl-RB | 620..1342 | 744..22 | 3615 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:00:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-RA | 2948 | CG7037-RA | 975..1699 | 744..20 | 3625 | 100 | Minus |
Cbl-RB | 4902 | CG7037-RB | 975..1697 | 744..22 | 3615 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:00:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8426471..8426813 | 744..402 | 1715 | 100 | Minus |
3L | 28110227 | 3L | 8427269..8427406 | 157..20 | 690 | 100 | Minus |
3L | 28110227 | 3L | 8426901..8427027 | 402..276 | 635 | 100 | Minus |
3L | 28110227 | 3L | 8427091..8427214 | 277..154 | 620 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:00:25 has no hits.
BO03369.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:42:16 Download gff for
BO03369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-PA | 621..1347 | 17..743 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:45:50 Download gff for
BO03369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7037-PA | 621..1347 | 17..743 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 10:59:11 Download gff for
BO03369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 976..1702 | 17..743 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:40:59 Download gff for
BO03369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 976..1702 | 17..743 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:40:59 Download gff for
BO03369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8426472..8426813 | 402..743 | 100 | -> | Minus |
3L | 8426902..8427026 | 277..401 | 100 | -> | Minus |
3L | 8427092..8427213 | 155..276 | 100 | -> | Minus |
3L | 8427272..8427409 | 17..154 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 10:59:11 Download gff for
BO03369.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8419572..8419913 | 402..743 | 100 | -> | Minus |
arm_3L | 8420002..8420126 | 277..401 | 100 | -> | Minus |
arm_3L | 8420192..8420313 | 155..276 | 100 | -> | Minus |
arm_3L | 8420372..8420509 | 17..154 | 99 | | Minus |
BO03369.5prime Sequence
837 bp (754 high quality bases) assembled on 2005-11-30
> BO03369.5prime
GAAGTTATCAGTCGACATGGCGACGAGAGGCAGTGGAACCCGTGTGCAAT
CGCAGCCAAAGATTTTCCCATCGCTGCTTTCCAAGCTGCACGGCGCTATC
TCGGAAGCCTGCGTCTCGCAGCGTCTGTCCACCGACAAGAAGACGCTGGA
GAAGACCTGGAAGTTGATGGACAAGGTGGTCAAACTGTGCCAGCAGCCGA
AGATGAATCTTAAGAATAGTCCACCGTTTATTTTGGACATCCTGCCGGAT
ACGTACCAGCGCCTGAGATTGATCTACTCAAAGAACGAGGACCAGATGCA
CCTGCTCCATGCCAACGAGCACTTCAACGTGTTCATCAACAACCTGATGC
GAAAGTGCAAGCAGGCCATCAAGTTGTTCAAGGAGGGCAAGGAGAAGATG
TTCGACGAGAACTCCCACTACCGCCGCAATCTCACCAAGCTCAGCCTGGT
CTTCTCCCACATGCTCAGCGAACTGAAGGCCATATTCCCCAACGGTGTCT
TTGCCGGGGATCAATTTCGGATCACCAAAGCGGATGCGGCTGACTTTTGG
AAGAGCAACTTCGGTAACAGCACATTGGTTCCCTGGAAAATCTTCCGGCA
GGAGCTTAACAAAGTACATCCCATAATCTCCGGCCTGGAGGCCATGGCCC
TAAAGACCACTATCGATCTTACCTGCAACGACTTCATTTCCAACTTCGAG
TTCGACGTCTTCACACGCCTCTTCCAGCCTTGGGTGACCCTGCTACGCAA
CTGGCAGATTCTGGCCGTCACACATCCGGGCTACGTGGCGTTTCTCACAT
ACGACGAGGTGAAGGCTCGCCTACAGCGCTACATCCT
BO03369.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:48:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7037-PA | 1347 | Cbl-RA | 1..821 | 17..837 | 4105 | 100 | Plus |
CG7037-PB | 2637 | Cbl-RB | 1..821 | 17..837 | 4105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:26:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-RB | 4902 | CG7037-RB | 356..1176 | 17..837 | 4105 | 100 | Plus |
Cbl-RA | 2948 | CG7037-RA | 356..1176 | 17..837 | 4105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:26:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8425309..8425862 | 17..570 | 2770 | 100 | Plus |
3L | 28110227 | 3L | 8426403..8426672 | 568..837 | 1350 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 18:26:04 has no hits.
BO03369.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:42:17 Download gff for
BO03369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-PA | 1..821 | 17..837 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:45:51 Download gff for
BO03369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7037-PB | 1..821 | 17..837 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 03:56:32 Download gff for
BO03369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 349..1176 | 10..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:11:03 Download gff for
BO03369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 349..1176 | 10..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:11:03 Download gff for
BO03369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8425302..8425862 | 10..570 | 99 | -> | Plus |
3L | 8426406..8426672 | 571..837 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 03:56:32 Download gff for
BO03369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8418402..8418962 | 10..570 | 99 | -> | Plus |
arm_3L | 8419506..8419772 | 571..837 | 100 | | Plus |
BO03369.complete Sequence
1379 bp assembled on 2011-06-28
> BO03369.complete
GAAGTTATCAGTCGACATGGCGACGAGAGGCAGTGGAACCCGTGTGCAAT
CGCAGCCAAAGATTTTCCCATCGCTGCTTTCCAAGCTGCACGGCGCTATC
TCGGAAGCCTGCGTCTCGCAGCGTCTGTCCACCGACAAGAAGACGCTGGA
GAAGACCTGGAAGTTGATGGACAAGGTGGTCAAACTGTGCCAGCAGCCGA
AGATGAATCTTAAGAATAGTCCACCGTTTATTTTGGACATCCTGCCGGAT
ACGTACCAGCGCCTGAGATTGATCTACTCAAAGAACGAGGACCAGATGCA
CCTGCTCCATGCCAACGAGCACTTCAACGTGTTCATCAACAACCTGATGC
GAAAGTGCAAGCAGGCCATCAAGTTGTTCAAGGAGGGCAAGGAGAAGATG
TTCGACGAGAACTCCCACTACCGCCGCAATCTCACCAAGCTCAGCCTGGT
CTTCTCCCACATGCTCAGCGAACTGAAGGCCATATTCCCCAACGGTGTCT
TTGCCGGGGATCAATTTCGGATCACCAAAGCGGATGCGGCTGACTTTTGG
AAGAGCAACTTCGGTAACAGCACATTGGTTCCCTGGAAAATCTTCCGGCA
GGAGCTTAACAAAGTACATCCCATAATCTCCGGCCTGGAGGCCATGGCCC
TAAAGACCACTATCGATCTTACCTGCAACGACTTCATTTCCAACTTCGAG
TTCGACGTCTTCACACGCCTCTTCCAGCCTTGGGTGACCCTGCTACGCAA
CTGGCAGATTCTGGCCGTCACACATCCGGGCTACGTGGCGTTTCTCACAT
ACGACGAGGTGAAGGCTCGCCTACAGCGCTACATCCTCAAGGCGGGCAGC
TACGTTTTCCGGCTCTCCTGCACGCGATTGGGCCAATGGGCCATCGGCTA
CGTAACTGCCGAGGGAGAGATTCTGCAGACAATCCCTCAGAACAAGTCGC
TGTGCCAGGCGCTGCTCGATGGCCATCGAGAGGGCTTCTACTTGTACCCA
GATGGCCAAGCGTACAATCCGGATCTGTCGTCTGCCGTTCAAAGTCCCAC
AGAGGACCACATAACCGTTACCCAAGAGCAATACGAACTATACTGTGAAA
TGGGCAGCACCTTTCAGCTGTGCAAAATCTGTGCGGAGAACGACAAAGAT
ATCCGCATCGAGCCCTGTGGCCACTTGTTGTGCACTCCCTGCCTTACCTC
CTGGCAAGTGGATTCCGAGGGACAGGGCTGCCCCTTCTGTCGGGCCGAAA
TCAAGGGCACCGAACAAATCGTTGTGGACGCTTTCGATCCGCGCAAGCAA
CACAACCGGAACGTCACCAATGGGCGACAGCAGCAGCAGGAAGAAGACGA
CACTGAGGTAAAGAAGCTTTCTAGACCAT
BO03369.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-RA | 1347 | CG7037-PA | 1..1344 | 17..1360 | 6720 | 100 | Plus |
Cbl-RB | 2637 | CG7037-PB | 1..1342 | 17..1358 | 6710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-RA | 2948 | CG7037-RA | 356..1699 | 17..1360 | 6720 | 100 | Plus |
Cbl-RB | 4902 | CG7037-RB | 356..1697 | 17..1358 | 6710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8425309..8425862 | 17..570 | 2770 | 100 | Plus |
3L | 28110227 | 3L | 8426403..8426813 | 568..978 | 2055 | 100 | Plus |
3L | 28110227 | 3L | 8427269..8427406 | 1223..1360 | 690 | 100 | Plus |
3L | 28110227 | 3L | 8426901..8427027 | 978..1104 | 635 | 100 | Plus |
3L | 28110227 | 3L | 8427091..8427214 | 1103..1226 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:01:14 has no hits.
BO03369.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:15:54 Download gff for
BO03369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 365..1711 | 17..1363 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:50:18 Download gff for
BO03369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 356..1702 | 17..1363 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:22 Download gff for
BO03369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cbl-RA | 356..1702 | 17..1363 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:22 Download gff for
BO03369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8425309..8425862 | 17..570 | 100 | -> | Plus |
3L | 8426406..8426813 | 571..978 | 100 | -> | Plus |
3L | 8426902..8427026 | 979..1103 | 100 | -> | Plus |
3L | 8427092..8427213 | 1104..1225 | 100 | -> | Plus |
3L | 8427272..8427409 | 1226..1363 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:50:18 Download gff for
BO03369.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8420192..8420313 | 1104..1225 | 100 | -> | Plus |
arm_3L | 8420372..8420509 | 1226..1363 | 99 | | Plus |
arm_3L | 8418409..8418962 | 17..570 | 100 | -> | Plus |
arm_3L | 8419506..8419913 | 571..978 | 100 | -> | Plus |
arm_3L | 8420002..8420126 | 979..1103 | 100 | -> | Plus |
BO03369.pep Sequence
Translation from 16 to 1378
> BO03369.pep
MATRGSGTRVQSQPKIFPSLLSKLHGAISEACVSQRLSTDKKTLEKTWKL
MDKVVKLCQQPKMNLKNSPPFILDILPDTYQRLRLIYSKNEDQMHLLHAN
EHFNVFINNLMRKCKQAIKLFKEGKEKMFDENSHYRRNLTKLSLVFSHML
SELKAIFPNGVFAGDQFRITKADAADFWKSNFGNSTLVPWKIFRQELNKV
HPIISGLEAMALKTTIDLTCNDFISNFEFDVFTRLFQPWVTLLRNWQILA
VTHPGYVAFLTYDEVKARLQRYILKAGSYVFRLSCTRLGQWAIGYVTAEG
EILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHIT
VTQEQYELYCEMGSTFQLCKICAENDKDIRIEPCGHLLCTPCLTSWQVDS
EGQGCPFCRAEIKGTEQIVVDAFDPRKQHNRNVTNGRQQQQEEDDTEVKK
LSRP
BO03369.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:48:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cbl-PA | 448 | CG7037-PA | 1..448 | 1..448 | 2386 | 100 | Plus |
Cbl-PB | 878 | CG7037-PB | 1..447 | 1..447 | 2382 | 100 | Plus |