Clone Sequence Records
BO03719.3prime Sequence
657 bp (627 high quality bases) assembled on 2005-12-01
> BO03719.3prime
ATGGTCTAGAAAGCTTGCTTTAAATTGGCTTTCTTCAGGCGCTGTTTTTG
GCGTTCCTATTTTGTTGTCTCCGTTCGTTTTTTCATGAGAAATGTTTGTA
ATTATAGATTTAATTACAACAGAACTAGTACTCGTTTCCGTCGTATTTCT
TTTCGATTCCAAGTCCTCTAAATTAGAAATATTAATATTTGGAATTTCAC
TCATGTTTACGGTAGTACTGGCTTTGTTGGTTTGCGTGCTAAGTACAGAT
AGGCGACCAATGGTTTCCTCTGTATTAATAGAACACAAAGTGGTGGTCGT
CATATTTAAATGGTCGCGCACCGAGTCAACGGTAATATCGCCAATAGAGC
TGCTGATAGTCTCGTTAGCTTGATTAGGTGAATTTGAAATGTTGACTCCA
TTAACTTGCTGAACACTATTTCTTCCAACGTTTTCCTCTGCAGGCCTTGT
GCATATTGAAATGCCTGATGGATTTTTAATTTCATATGTATTCACAACTT
CATCACATGCGTAGGTTTCCTTATTATTCTCTGCATCATTTTCTTCCAAC
ACAGACTCTTCATTTTCTAATGGTTCTACTGGAACAACGCCAGTGGGTTG
CACGACTCTGGACGTGGCTAAAGCAATACGCTGCAGTTCAGAAGAAGACA
TCATATA
BO03719.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:52:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2671-PB | 3462 | l(2)gl-RB | 2824..3459 | 657..22 | 3180 | 100 | Minus |
CG2671-PD | 3339 | l(2)gl-RD | 2701..3336 | 657..22 | 3180 | 100 | Minus |
CG2671-PE | 3339 | l(2)gl-RE | 2701..3336 | 657..22 | 3180 | 100 | Minus |
CG2671-PF | 3339 | l(2)gl-RF | 2701..3336 | 657..22 | 3180 | 100 | Minus |
CG2671-PC | 3486 | l(2)gl-RC | 2848..3483 | 657..22 | 3180 | 100 | Minus |
CG2671-PA | 3486 | l(2)gl-RA | 2848..3483 | 657..22 | 3180 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:53:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)gl-RJ | 5528 | CG2671-RJ | 3514..4149 | 657..22 | 3180 | 100 | Minus |
l(2)gl-RI | 5390 | CG2671-RI | 3376..4011 | 657..22 | 3180 | 100 | Minus |
l(2)gl-RH | 5179 | CG2671-RH | 3165..3800 | 657..22 | 3180 | 100 | Minus |
l(2)gl-RJ | 5528 | CG2671-RJ | 4196..4301 | 150..45 | 365 | 89.6 | Minus |
l(2)gl-RI | 5390 | CG2671-RI | 4058..4163 | 150..45 | 365 | 89.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:53:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11777..12178 | 256..657 | 2010 | 100 | Plus |
2L | 23513712 | 2L | 11218..11346 | 22..150 | 645 | 100 | Plus |
2L | 23513712 | 2L | 11410..11519 | 149..258 | 550 | 100 | Plus |
2L | 23513712 | 2L | 11066..11171 | 45..150 | 365 | 89.6 | Plus |
Blast to na_te.dros performed 2015-02-13 12:53:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
1360 | 3409 | 1360 1360 3409bp | 965..1052 | 545..457 | 109 | 59.6 | Minus |
Dbuz\Newton | 1510 | Dbuz\Newton NEWTON 1510bp | 782..813 | 469..500 | 106 | 81.2 | Plus |
BO03719.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:47:06 Download gff for
BO03719.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2671-PD | 2702..3339 | 19..656 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:52:50 Download gff for
BO03719.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2671-PA | 2849..3486 | 19..656 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:38:45 Download gff for
BO03719.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RH | 3166..3807 | 11..656 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:37:19 Download gff for
BO03719.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RH | 3166..3807 | 11..656 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:37:19 Download gff for
BO03719.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11211..11344 | 11..148 | 96 | <- | Plus |
2L | 11410..11518 | 149..257 | 100 | <- | Plus |
2L | 11779..12177 | 258..656 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:38:45 Download gff for
BO03719.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11410..11518 | 149..257 | 100 | <- | Plus |
arm_2L | 11211..11344 | 11..148 | 96 | <- | Plus |
arm_2L | 11779..12177 | 258..656 | 100 | | Plus |
BO03719.5prime Sequence
567 bp (409 high quality bases) assembled on 2005-12-01
> BO03719.5prime
GAAGTTATCAGTCGACATGTTAAAGTTTATCAGAGGAAAAGGGCAGCAGC
CCAGTGCTGACAGACACCGCCTACAGAAGGACCTTTTTGCTTATCGTAAG
ACGGCACAGCATGGCTTTCCTCATAAGCCTTCGGCTCTTGCGTATGATCC
AGTTTTGAAACTTATGGCAATAGGGACGCAAACAGGGGCTTTAAAAGTTT
TCGGTCAACCCGGAGTTGAATTGTACGGTCAGCATACTTTGTTAAACAAT
TCAGCATCGGAGCTTAATGTACAATTACTTGAATGGGTGTATGGAACTGG
TCGCATACTTTCGTTGACGGCAGCGAATCAATTAATTCTATGGGAGCCAG
TTGGAGCAACGTTGCTGCCAATCAAAACACTACCGTTTGACGGCAAACTT
AAAAAAGTTTCATCGCTGTGCTGTTCTCTCAGTAAGGACCTGCTATGGAT
TGGAACAGAAGGAGGAAACATCTATCAACTGGATTTACATACATTTACCA
TTAAGGAGCCTGTAATTTACCATGACGTTGTGCTAGAGCAGGTGCCACCC
AGCCTACCAAGCTAAAT
BO03719.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:52:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2671-PC | 3486 | l(2)gl-RC | 1..533 | 17..549 | 2615 | 99.6 | Plus |
CG2671-PA | 3486 | l(2)gl-RA | 1..533 | 17..549 | 2615 | 99.6 | Plus |
CG2671-PB | 3462 | l(2)gl-RB | 61..509 | 101..549 | 2195 | 99.5 | Plus |
CG2671-PD | 3339 | l(2)gl-RD | 1..386 | 164..549 | 1880 | 99.4 | Plus |
CG2671-PE | 3339 | l(2)gl-RE | 1..386 | 164..549 | 1880 | 99.4 | Plus |
CG2671-PF | 3339 | l(2)gl-RF | 1..386 | 164..549 | 1880 | 99.4 | Plus |
CG2671-PB | 3462 | l(2)gl-RB | 1..50 | 17..66 | 250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:22:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)gl-RK | 5281 | CG2671-RK | 529..1077 | 17..567 | 2675 | 99.3 | Plus |
l(2)gl-RJ | 5528 | CG2671-RJ | 667..1215 | 17..567 | 2675 | 99.3 | Plus |
l(2)gl-RI | 5390 | CG2671-RI | 529..1077 | 17..567 | 2675 | 99.3 | Plus |
l(2)gl-RK | 5281 | CG2671-RK | 387..441 | 16..70 | 260 | 98.2 | Plus |
l(2)gl-RJ | 5528 | CG2671-RJ | 525..579 | 16..70 | 260 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15263..15713 | 549..99 | 2225 | 99.6 | Minus |
2L | 23513712 | 2L | 17053..17136 | 100..17 | 420 | 100 | Minus |
2L | 23513712 | 2L | 19891..19945 | 70..16 | 260 | 98.2 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:22:45 has no hits.
BO03719.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:47:07 Download gff for
BO03719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2671-PA | 1..549 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:52:52 Download gff for
BO03719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2671-PA | 1..549 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:49:54 Download gff for
BO03719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RI | 529..1077 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:41:25 Download gff for
BO03719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RI | 529..1077 | 17..567 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:41:25 Download gff for
BO03719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15247..15711 | 101..567 | 99 | <- | Minus |
2L | 17053..17136 | 17..100 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:49:54 Download gff for
BO03719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15247..15711 | 101..567 | 99 | <- | Minus |
arm_2L | 17053..17136 | 17..100 | 100 | | Minus |
BO03719.complete Sequence
3520 bp assembled on 2006-10-10
GenBank Submission: FJ629585
> BO03719.complete
GAAGTTATCAGTCGACATGTTAAAGTTTATCAGAGGAAAAGGGCAGCAGC
CCAGTGCTGACAGACACCGCCTACAGAAGGACCTTTTTGCTTATCGTAAG
ACGGCACAGCATGGCTTTCCTCATAAGCCTTCGGCTCTTGCGTATGATCC
AGTTTTGAAACTTATGGCAATAGGGACGCAAACAGGGGCTTTAAAAGTTT
TCGGTCAACCCGGAGTTGAATTGTACGGTCAGCATACTTTGTTAAACAAT
TCAGCATCGGAGCTTAATGTACAATTACTTGAATGGGTGTATGGAACTGG
TCGCATACTTTCGTTGACGGCAGCGAATCAATTAATTCTATGGGAGCCAG
TTGGAGCAACGTTGCTGCCAATCAAAACACTACCGTTTGACGGCAAACTT
AAAAAAGTTTCATCGCTGTGCTGTTCTCTCAGTAAGGACCTGCTATGGAT
TGGAACAGAAGGAGGAAACATCTATCAACTGGATTTACATACATTTACCA
TTAAGGAGCCTGTAATTTACCATGACGTTGTGCTAGAGCAGGTGCCACCA
GCCTACAAGCTAAATCCTGGTGCAATTGAGTCAATCCGCCAACTTCCAAA
CTCCCCTAGCAAACTTCTAGTTGCATACAATCGCGGCCTTTGTGTTTTGT
GGGATTTTGAAAGCGCATCTGTCCAGCGAGCATACATAGCCCCTGGACAT
GGACAGAGCGTTGGTCTTACAGTGAACTTCGAAGGATCTGAATTTACCTG
GTACCACGCTGATGGTTCATACGCCACTTGGAGCATAGATAACCCAGAAC
CGCCGTCGAATGTTAATTATGTGCCTTATGGACCTGATCCATGCAAAAGC
ATAAATCGACTGTACAAAGGCAAGCGAAGATCCAACGATGTAATTGTTTT
TTCCGGCGGCATGCCACGGTCAGCATATGGTGATCACAATTGTGTGTCCG
TTCACGCCAGCGATGGACACAAAGTGTGTCTTGACTTTACGTCTAAAGTG
ATTGACTTTTTTGTGACCTTTGAAAATAATAGAGATGTCGCTGAAGTTCT
TGTTGTACTACTTGAAGAGGAACTCTGCGCTTACGATCTTACTGACCCTA
ATATTTGTGCTATCAAAGCGCCATATCTTCACTCTGTCCATGCATCAGCT
GTCACTTGCAATTACCTTGCTTCTGAAGTCGTACAGTCGGTATATGAAAG
TATTTTAAGAGCTGGAGATGAACAAGACATTGACTATAGCAATATTAGCT
GGCCTATCACTGGCGGTACTCTCCCGGATAACTTAGAAGAATCTGTAGAA
GAGGACGCGACTAAGCTTTATGAGATTTTGTTAACTGGTCACGAAGATGG
TTCTGTTAAATTTTGGGACTGCACTGGAGTGTTGCTTAAACCAATTTATA
ATTTTAAAACTAGCAGCATTTTTGGAAGTGAGTCAGACTTCCGAGATGAC
GCAGCTGCAGATATGAGTGCGGAACAAGTCGATGAAGGAGAACCGCCATT
TCGGAAATCAGGACTTTTTGATCCTTATTCAGATGACCCTCGTTTAGCAG
TGAAGAAAATAGCATTCTGCCCAAAAACCGGACAACTTATTGTTGGTGGC
ACAGCGGGCCAAATAGTTATAGCCGACTTCATAGACTTACCCGAAAAAGT
GTCTTTAAAATACATTTCAATGAATTTGGTCAGCGATCGTGATGGATTTG
TGTGGAAGGGTCACGATCAGTTAAACGTGCGATCGAACTTATTAGACGGA
GAAGCAATTCCTACGACGGAACGTGGTGTAAATATATCGGGAGTACTGCA
AGTTTTGCCGCCAGCCAGCATAACATGCATGGCACTCGAAGCAAGCTGGG
GCCTAGTATCTGGTGGGACTGCGCACGGCTTAGTTCTCTTTGACTTCAAA
AACTTTGTTCCAGTATTTCATCGCTGCACTTTAAACCCAAATGATCTTAC
TGGAGCAGGAGAGCAGCTGTCTCGTCGAAAGTCTTTTAAGAAATCATTGA
GGGAGTCATTTAGAAAGCTTCGCAAGGGTCGATCGACCAGGACCAACCAG
AGCAATCAAGTACCAACAACGCTGGAAGCAAGACCCGTCGAGAGGCAAAT
AGAGGCTCGTTGTGCAGATGACGGGCTAGGATCCATGGTGCGATGTTTAC
TATTTGCCAAAACTTATGTTACTAATGTCAACATAACGTCGCCAACTTTG
TGGTCAGCAACAAATGCCAGTACAGTCTCGGTTTTCCTTCTGCATTTGCC
ACCAGCGCAGACCGCGGCAACTGCCGTCCCGTCGGCAAGTGGCAATGCAC
CACCACACATGCCCCGCCGAATTTCTGCGCAGCTTGCTAAAGAAATACAA
TTAAAACATCGTGCTCCTGTGGTGGGTATTTCTATTTTTGATCAGGCGGG
TAGCCCTGTCGATCAGCTGAACGCCGGTGAAAACGGGAGTCCACCGCATC
GTGTACTTATTGCTTCCGAGGAACAGTTCAAGGTGTTTTCACTTCCGCAA
CTAAAGCCGATTAACAAATATAAGCTTACCGCTAACGAAGGTGCTCGGAT
TCGCCGCATCCATTTTGGTTCGTTTAGTTGTCGCATATCCCCGGAAACAC
TGCAGAGTATGCACGGTTGTAGCCCAACTAAGTCCACGCGTTCACATGGC
GATGGAGAGGCGGATCCTAATATCAGTGGAAGCTTGGCTGTAAGTCGTGG
AGATGTATATAACGAAACAGCATTGATATGTTTAACGAATATGGGCGATA
TCATGGTTTTATCAGTACCTGAATTAAAAAGACAGCTGAATGCCGCAGCA
GTGCGACGGGAAGACATTAATGGAGTTTCGTCACTTTGCTTTACAAACTC
TGGAGAAGCACTGTATATGATGTCTTCTTCTGAACTGCAGCGTATTGCTT
TAGCCACGTCCAGAGTCGTGCAACCCACTGGCGTTGTTCCAGTAGAACCA
TTAGAAAATGAAGAGTCTGTGTTGGAAGAAAATGATGCAGAGAATAATAA
GGAAACCTACGCATGTGATGAAGTTGTGAATACATATGAAATTAAAAATC
CATCAGGCATTTCAATATGCACAAGGCCTGCAGAGGAAAACGTTGGAAGA
AATAGTGTTCAGCAAGTTAATGGAGTCAACATTTCAAATTCACCTAATCA
AGCTAACGAGACTATCAGCAGCTCTATTGGCGATATTACCGTTGACTCGG
TGCGCGACCATTTAAATATGACGACCACCACTTTGTGTTCTATTAATACA
GAGGAAACCATTGGTCGCCTATCTGTACTTAGCACGCAAACCAACAAAGC
CAGTACTACCGTAAACATGAGTGAAATTCCAAATATTAATATTTCTAATT
TAGAGGACTTGGAATCGAAAAGAAATACGACGGAAACGAGTACTAGTTCT
GTTGTAATTAAATCTATAATTACAAACATTTCTCATGAAAAAACGAACGG
AGACAACAAAATAGGAACGCCAAAAACAGCGCCTGAAGAAAGCCAATTTA
AAGCAAGCTTTCTAGACCAT
BO03719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:57:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)gl-RJ | 3486 | CG2671-PJ | 1..3483 | 17..3499 | 17385 | 99.9 | Plus |
l(2)gl-RI | 3486 | CG2671-PI | 1..3483 | 17..3499 | 17385 | 99.9 | Plus |
l(2)gl-RH | 3486 | CG2671-PH | 1..3483 | 17..3499 | 17385 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:57:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)gl-RJ | 5528 | CG2671-RJ | 667..4149 | 17..3499 | 17385 | 99.9 | Plus |
l(2)gl-RI | 5390 | CG2671-RI | 529..4011 | 17..3499 | 17385 | 99.9 | Plus |
l(2)gl-RH | 5179 | CG2671-RH | 318..3800 | 17..3499 | 17385 | 99.9 | Plus |
l(2)gl-RJ | 5528 | CG2671-RJ | 4196..4301 | 3371..3476 | 365 | 89.6 | Plus |
l(2)gl-RI | 5390 | CG2671-RI | 4058..4163 | 3371..3476 | 365 | 89.6 | Plus |
l(2)gl-RJ | 5528 | CG2671-RJ | 525..579 | 16..70 | 260 | 98.2 | Plus |
l(2)gl-RI | 5390 | CG2671-RI | 387..441 | 16..70 | 260 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:57:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13683..14876 | 2071..878 | 5970 | 100 | Minus |
2L | 23513712 | 2L | 14933..15713 | 879..99 | 3875 | 99.7 | Minus |
2L | 23513712 | 2L | 12286..12929 | 2820..2177 | 3220 | 100 | Minus |
2L | 23513712 | 2L | 11777..12221 | 3265..2821 | 2225 | 100 | Minus |
2L | 23513712 | 2L | 11218..11346 | 3499..3371 | 645 | 100 | Minus |
2L | 23513712 | 2L | 11410..11519 | 3372..3263 | 550 | 100 | Minus |
2L | 23513712 | 2L | 13520..13626 | 2177..2071 | 535 | 100 | Minus |
2L | 23513712 | 2L | 17053..17136 | 100..17 | 420 | 100 | Minus |
2L | 23513712 | 2L | 11066..11171 | 3476..3371 | 365 | 89.6 | Minus |
2L | 23513712 | 2L | 19891..19945 | 70..16 | 260 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:57:03 has no hits.
BO03719.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:54 Download gff for
BO03719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RA | 1..3486 | 17..3502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:06:10 Download gff for
BO03719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RA | 543..4032 | 17..3510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:21 Download gff for
BO03719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RH | 323..3804 | 22..3504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:54 Download gff for
BO03719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RA | 543..4032 | 17..3510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:31:41 Download gff for
BO03719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)gl-RH | 323..3804 | 22..3504 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:31:41 Download gff for
BO03719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11214..11344 | 3373..3504 | 98 | <- | Minus |
2L | 11410..11518 | 3264..3372 | 100 | <- | Minus |
2L | 11779..12221 | 2821..3263 | 100 | <- | Minus |
2L | 12286..12928 | 2178..2820 | 100 | <- | Minus |
2L | 13520..13625 | 2072..2177 | 100 | <- | Minus |
2L | 13683..14874 | 880..2071 | 100 | <- | Minus |
2L | 14933..15711 | 101..879 | 99 | <- | Minus |
2L | 17053..17131 | 22..100 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:21 Download gff for
BO03719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11214..11344 | 3373..3504 | 98 | <- | Minus |
arm_2L | 11410..11518 | 3264..3372 | 100 | <- | Minus |
arm_2L | 11779..12221 | 2821..3263 | 100 | <- | Minus |
arm_2L | 13520..13625 | 2072..2177 | 100 | <- | Minus |
arm_2L | 12286..12928 | 2178..2820 | 100 | <- | Minus |
arm_2L | 13683..14874 | 880..2071 | 100 | <- | Minus |
arm_2L | 14933..15711 | 101..879 | 99 | <- | Minus |
arm_2L | 17053..17131 | 22..100 | 100 | | Minus |
BO03719.pep Sequence
Translation from 16 to 3520
> BO03719.pep
MLKFIRGKGQQPSADRHRLQKDLFAYRKTAQHGFPHKPSALAYDPVLKLM
AIGTQTGALKVFGQPGVELYGQHTLLNNSASELNVQLLEWVYGTGRILSL
TAANQLILWEPVGATLLPIKTLPFDGKLKKVSSLCCSLSKDLLWIGTEGG
NIYQLDLHTFTIKEPVIYHDVVLEQVPPAYKLNPGAIESIRQLPNSPSKL
LVAYNRGLCVLWDFESASVQRAYIAPGHGQSVGLTVNFEGSEFTWYHADG
SYATWSIDNPEPPSNVNYVPYGPDPCKSINRLYKGKRRSNDVIVFSGGMP
RSAYGDHNCVSVHASDGHKVCLDFTSKVIDFFVTFENNRDVAEVLVVLLE
EELCAYDLTDPNICAIKAPYLHSVHASAVTCNYLASEVVQSVYESILRAG
DEQDIDYSNISWPITGGTLPDNLEESVEEDATKLYEILLTGHEDGSVKFW
DCTGVLLKPIYNFKTSSIFGSESDFRDDAAADMSAEQVDEGEPPFRKSGL
FDPYSDDPRLAVKKIAFCPKTGQLIVGGTAGQIVIADFIDLPEKVSLKYI
SMNLVSDRDGFVWKGHDQLNVRSNLLDGEAIPTTERGVNISGVLQVLPPA
SITCMALEASWGLVSGGTAHGLVLFDFKNFVPVFHRCTLNPNDLTGAGEQ
LSRRKSFKKSLRESFRKLRKGRSTRTNQSNQVPTTLEARPVERQIEARCA
DDGLGSMVRCLLFAKTYVTNVNITSPTLWSATNASTVSVFLLHLPPAQTA
ATAVPSASGNAPPHMPRRISAQLAKEIQLKHRAPVVGISIFDQAGSPVDQ
LNAGENGSPPHRVLIASEEQFKVFSLPQLKPINKYKLTANEGARIRRIHF
GSFSCRISPETLQSMHGCSPTKSTRSHGDGEADPNISGSLAVSRGDVYNE
TALICLTNMGDIMVLSVPELKRQLNAAAVRREDINGVSSLCFTNSGEALY
MMSSSELQRIALATSRVVQPTGVVPVEPLENEESVLEENDAENNKETYAC
DEVVNTYEIKNPSGISICTRPAEENVGRNSVQQVNGVNISNSPNQANETI
SSSIGDITVDSVRDHLNMTTTTLCSINTEETIGRLSVLSTQTNKASTTVN
MSEIPNINISNLEDLESKRNTTETSTSSVVIKSIITNISHEKTNGDNKIG
TPKTAPEESQFKASFLDH
BO03719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:04:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)gl-PJ | 1161 | CG2671-PJ | 1..1161 | 1..1161 | 6021 | 100 | Plus |
l(2)gl-PI | 1161 | CG2671-PI | 1..1161 | 1..1161 | 6021 | 100 | Plus |
l(2)gl-PH | 1161 | CG2671-PH | 1..1161 | 1..1161 | 6021 | 100 | Plus |
l(2)gl-PG | 1161 | CG2671-PG | 1..1161 | 1..1161 | 6021 | 100 | Plus |
l(2)gl-PA | 1161 | CG2671-PA | 1..1161 | 1..1161 | 6021 | 100 | Plus |