Clone Sequence Records
BO03768.3prime Sequence
757 bp (716 high quality bases) assembled on 2005-12-01
> BO03768.3prime
ATGGTCTAGAAAGCTTGCCTTGAGCTGCACCTGGAATGACTGCGCCGGCG
CCTTGGGCGGTGAGATGAACGGATTGGTGCTGTGCCTGGCCAGAGGCGAG
CGCGCAGTGCTCGGGATTGGCAAGTCTGGCGACAATTGCTTGGCCGCTGC
CACATTGGCCACCCACTCGGCGTCAAATGGATCGTCTGGGCCACCGCCTC
CAACTGCAGCGCCAGTGCCACTGGCCAGTGTCTGAGCTCGGCCAACGTTG
GCCAAATAAGTGGGCCGCTTCGGTGCTGCCGGAGACGTACTGCGCACCAC
ATGACCCAGCCATTGCTCGGCATTGGGCAGTTCCGTCGAGGTTTCGATGC
TCTGCTCCGATCGCGAGGGCGACTGCGAATGGAGCGTCTGATATGTGGGC
GTGGTGCTGGCCACTCGAGGCGTCACTTGTGCCGTCGGCGGGGCATATGA
GTGTACATGTTGCACCTGCTTCTCGGCGGCAATGATGTTCTGATTAATGC
TGCGATTGTTGTTGAAGTTTAGATCCTCGCCGGCGGCTAATAGGGCGTCT
GTCTGGGTCAAGAGCGAGAGACCCTGGCTGAGCTCCTGACACAGTTGGCT
CACAGAATCGGCGGCTACAGCGGCAGCTGACAACGGATCCGCTCCAGCAG
ACTTGGCCGGCGAGACCTCGGCAATGGGAGAAACACTTCGCAGTGGCGTC
TGCATTGGATTGCCAGCGGCGGCGGTCAGGAAGGCCCTCTGACGATCGGC
ATTGGAC
BO03768.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:53:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3779-PA | 1671 | numb-RA | 933..1668 | 757..22 | 3680 | 100 | Minus |
| CG3779-PB | 1548 | numb-RB | 810..1545 | 757..22 | 3680 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:09:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 1751..2492 | 757..16 | 3695 | 99.9 | Minus |
| numb-RB | 2956 | CG3779-RB | 1373..2114 | 757..16 | 3695 | 99.9 | Minus |
| numb-RA | 3309 | CG3779-RA | 1726..2467 | 757..16 | 3695 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:08:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9461540..9462281 | 757..16 | 3695 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:08:57 has no hits.
BO03768.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:48:07 Download gff for
BO03768.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-PB | 810..1548 | 19..757 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:54:17 Download gff for
BO03768.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3779-PB | 810..1548 | 19..757 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:24:25 Download gff for
BO03768.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1726..2469 | 13..757 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:00:35 Download gff for
BO03768.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1726..2469 | 13..757 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:00:35 Download gff for
BO03768.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9461540..9462283 | 13..757 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:24:25 Download gff for
BO03768.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9461540..9462283 | 13..757 | 99 | | Minus |
BO03768.5prime Sequence
717 bp (697 high quality bases) assembled on 2005-12-01
> BO03768.5prime
GAAGTTATCAGTCGACATGCAGGTCTGCGAGGAGGCACTCAAGGTCTTGA
GGCAATCCCGTCGTCGTCCTGTCCGCGGATTACTTCATGTCAGCGGAGAC
GGCCTGCGAGTGGTGGACGACGAGACCAAGGGCCTGATAGTGGACCAGAC
CATCGAGAAGGTCAGCTTCTGTGCACCGGATCGCAATCACGAACGCGGCT
TCAGCTACATATGCCGGGATGGAACCACTCGTCGCTGGATGTGTCACGGC
TTCCTGGCGTGCAAGGACTCCGGCGAGCGATTGTCCCATGCCGTTGGCTG
TGCTTTTGCCGTTTGTCTGGAGCGAAAGCAGCGACGCGACAAGGAGTGCG
GCGTGACAATGACCTTCGACACGAAGAACTCGACCTTCACGCGGACCGGA
TCCTTCCGTCAGCAGACGTTGACGGAGCGTCTGGCAATGGCCACAGTGGG
CACAAATGAGCGGAGCGTAGATGGGCCGGGATCAGCAATGCCGGGTCCTC
CGGCGGCCACCGTCAAGCCTTTCAATCCCTTCGCCATCGAACGGCCCCAT
GCCACGCCCAACATGCTGGAGCGTCAGAGTTCGTTCCGTTTGAGCACGAT
TGGCAGTCAGTCGCCGTTCAAGCGCCAGATGTCACTGCGCATCAACGATC
TTCCGTCCAATGCCGATCGTCAGAGGGCCTTCCTGACCGCCGCCGCTGGC
AATCCAATGCAGACGCC
BO03768.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3779-PA | 1671 | numb-RA | 294..995 | 16..717 | 3510 | 100 | Plus |
| CG3779-PB | 1548 | numb-RB | 171..872 | 16..717 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:58:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 1112..1813 | 16..717 | 3510 | 100 | Plus |
| numb-RB | 2956 | CG3779-RB | 734..1435 | 16..717 | 3510 | 100 | Plus |
| numb-RA | 3309 | CG3779-RA | 1087..1788 | 16..717 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:58:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9461602 | 52..717 | 3330 | 100 | Plus |
| 2L | 23513712 | 2L | 9460717..9460753 | 16..52 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:58:02 has no hits.
BO03768.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:48:07 Download gff for
BO03768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-PB | 168..872 | 13..717 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:54:19 Download gff for
BO03768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3779-PB | 168..872 | 13..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:35:57 Download gff for
BO03768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1084..1788 | 13..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:39:20 Download gff for
BO03768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1084..1788 | 13..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:39:20 Download gff for
BO03768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460714..9460753 | 13..52 | 97 | -> | Plus |
| 2L | 9460938..9461602 | 53..717 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:35:57 Download gff for
BO03768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460714..9460753 | 13..52 | 97 | -> | Plus |
| arm_2L | 9460938..9461602 | 53..717 | 100 | | Plus |
BO03768.complete Sequence
1411 bp (1411 high quality bases) assembled on 2005-06-23
> BO03768.complete
GAAGTTATCAGTCGACATGCAGGTCTGCGAGGAGGCACTCAAGGTCTTGA
GGCAATCCCGTCGTCGTCCTGTCCGCGGATTACTTCATGTCAGCGGAGAC
GGCCTGCGAGTGGTGGACGACGAGACCAAGGGCCTGATAGTGGACCAGAC
CATCGAGAAGGTCAGCTTCTGTGCACCGGATCGCAATCACGAACGCGGCT
TCAGCTACATATGCCGGGATGGAACCACTCGTCGCTGGATGTGTCACGGC
TTCCTGGCGTGCAAGGACTCCGGCGAGCGATTGTCCCATGCCGTTGGCTG
TGCTTTTGCCGTTTGTCTGGAGCGAAAGCAGCGACGCGACAAGGAGTGCG
GCGTGACAATGACCTTCGACACGAAGAACTCGACCTTCACGCGGACCGGA
TCCTTCCGTCAGCAGACGTTGACGGAGCGTCTGGCAATGGCCACAGTGGG
CACAAATGAGCGGAGCGTAGATGGGCCGGGATCAGCAATGCCGGGTCCTC
CGGCGGCCACCGTCAAGCCTTTCAATCCCTTCGCCATCGAACGGCCCCAT
GCCACGCCCAACATGCTGGAGCGTCAGAGTTCGTTCCGTTTGAGCACGAT
TGGCAGTCAGTCGCCGTTCAAGCGCCAGATGTCACTGCGCATCAACGATC
TTCCGTCCAATGCCGATCGTCAGAGGGCCTTCCTGACCGCCGCCGCTGGC
AATCCAATGCAGACGCCACTGCGAAGTGTTTCTCCCATTGCCGAGGTCTC
GCCGGCCAAGTCTGCTGGAGCGGATCCGTTGTCAGCTGCCGCTGTAGCCG
CCGATTCTGTGAGCCAACTGTGTCAGGAGCTCAGCCAGGGTCTCTCGCTC
TTGACCCAGACAGACGCCCTATTAGCCGCCGGCGAGGATCTAAACTTCAA
CAACAATCGCAGCATTAATCAGAACATCATTGCCGCCGAGAAGCAGGTGC
AACATGTACACTCATATGCCCCGCCGACGGCACAAGTGACGCCTCGAGTG
GCCAGCACCACGCCCACATATCAGACGCTCCATTCGCAGTCGCCCTCGCG
ATCGGAGCAGAGCATCGAAACCTCGACGGAACTGCCCAATGCCGAGCAAT
GGCTGGGTCATGTGGTGCGCAGTACGTCTCCGGCAGCACCGAAGCGGCCC
ACTTATTTGGCCAACGTTGGCCGAGCTCAGACACTGGCCAGTGGCACTGG
CGCTGCAGTTGGAGGCGGTGGCCCAGACGATCCATTTGACGCCGAGTGGG
TGGCCAATGTGGCAGCGGCCAAGCAATTGTCGCCAGACTTGCCAATCCCG
AGCACTGCGCGCTCGCCTCTGGCCAGGCACAGCACCAATCCGTTCATCTC
ACCGCCCAAGGCGCCGGCGCAGTCATTCCAGGTGCAGCTCAAGGCAAGCT
TTCTAGACCAT
BO03768.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:44:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 1671 | CG3779-PD | 294..1668 | 16..1390 | 6875 | 100 | Plus |
| numb-RB | 1548 | CG3779-PB | 171..1545 | 16..1390 | 6875 | 100 | Plus |
| numb-RA | 1671 | CG3779-PA | 294..1668 | 16..1390 | 6875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:44:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 1112..2492 | 16..1396 | 6890 | 99.9 | Plus |
| numb-RB | 2956 | CG3779-RB | 734..2114 | 16..1396 | 6890 | 99.9 | Plus |
| numb-RA | 3309 | CG3779-RA | 1087..2467 | 16..1396 | 6890 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:44:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9462281 | 52..1396 | 6710 | 99.9 | Plus |
| 2L | 23513712 | 2L | 9460717..9460753 | 16..52 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:44:22 has no hits.
BO03768.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:44:19 Download gff for
BO03768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RB | 168..1548 | 13..1393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:14:43 Download gff for
BO03768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RB | 687..2072 | 13..1399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:41 Download gff for
BO03768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1088..2466 | 17..1395 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:44:19 Download gff for
BO03768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RB | 687..2072 | 13..1399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:17:39 Download gff for
BO03768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1088..2466 | 17..1395 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:17:39 Download gff for
BO03768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460718..9460753 | 17..52 | 100 | -> | Plus |
| 2L | 9460938..9462280 | 53..1395 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:41 Download gff for
BO03768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460718..9460753 | 17..52 | 100 | -> | Plus |
| arm_2L | 9460938..9462280 | 53..1395 | 99 | | Plus |
BO03768.pep Sequence
Translation from 16 to 1411
> BO03768.pep
MQVCEEALKVLRQSRRRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEKVS
FCAPDRNHERGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAFAVC
LERKQRRDKECGVTMTFDTKNSTFTRTGSFRQQTLTERLAMATVGTNERS
VDGPGSAMPGPPAATVKPFNPFAIERPHATPNMLERQSSFRLSTIGSQSP
FKRQMSLRINDLPSNADRQRAFLTAAAGNPMQTPLRSVSPIAEVSPAKSA
GADPLSAAAVAADSVSQLCQELSQGLSLLTQTDALLAAGEDLNFNNNRSI
NQNIIAAEKQVQHVHSYAPPTAQVTPRVASTTPTYQTLHSQSPSRSEQSI
ETSTELPNAEQWLGHVVRSTSPAAPKRPTYLANVGRAQTLASGTGAAVGG
GGPDDPFDAEWVANVAAAKQLSPDLPIPSTARSPLARHSTNPFISPPKAP
AQSFQVQLKASFLDH
BO03768.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:32:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-PD | 556 | CG3779-PD | 99..556 | 1..458 | 2363 | 100 | Plus |
| numb-PB | 515 | CG3779-PB | 58..515 | 1..458 | 2363 | 100 | Plus |
| numb-PA | 556 | CG3779-PA | 99..556 | 1..458 | 2363 | 100 | Plus |
