Clone Sequence Records
BO03850.3prime Sequence
662 bp (641 high quality bases) assembled on 2005-12-01
> BO03850.3prime
ATGGTCTAGAAAGCTTGCCTTTTTACATGTGTGCTCCTCGAGTACCTTCG
TACAAACTTCACATTTAACCTGGCAACACCAGTGAAATTTGCAATTGCAG
CGTTCGTTAACTATAATGTTCTTCGTATTATAGCCCCGGCCGCAGCAGAG
GATGGCACAGCTCTCCAATCCCGACGAGTTTTTGTGGCACACACGTCCGT
GCGTTCCCGGCCAATGCAGCGCATAGCTATTGCGGCACCAGTCGGGACTT
TCGTCTAGGTAAATAAGATCGTGAGCGGTCGGCACCTTGAATTGCAAGTC
CTTGATCTGGAGGCGGCCACGCTTGTTGATCTTCACCTTGGTGGCGCCCT
CGTACTTCTCGCGCAGATAGTCGCCAATCTCCCGGATGGAGGACAATTGC
TGCCAGCAGGTGATCAGGCTGCAGGAGCCGGACACGCCGTGGCACTTGCA
CGTTATCCTGGCCTTCTTGATCACCGCCCGACGTCCGGCCTCGTTGTTGT
GCAAGTTCATCAGGCTCCTGGCCTTGACAGTGGCCGTGCTGCGCGGCAAT
ATGCCGCCATCCTTGTAGCTCTCCTTGATGCCGTTCCTCGGATAGGCGGG
CGCATCGGCGGCGGCTCTCTGGTTTTTTCGCTTCTTCTTGCGCGGTTGCT
GCTCACCCTTGA
BO03850.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:54:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6407-PA | 3015 | Wnt5-RA | 2372..3012 | 662..22 | 3180 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:36:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt5-RB | 4005 | CG6407-RB | 2925..3565 | 662..22 | 3190 | 99.8 | Minus |
| Wnt5-RA | 3850 | CG6407-RA | 2925..3565 | 662..22 | 3190 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:36:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18501841..18502481 | 22..662 | 3190 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:36:30 has no hits.
BO03850.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:49:32 Download gff for
BO03850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-PA | 2373..3015 | 19..661 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:56:18 Download gff for
BO03850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6407-PA | 2373..3015 | 19..661 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:10:46 Download gff for
BO03850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 2926..3571 | 13..661 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:39:11 Download gff for
BO03850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 2926..3571 | 13..661 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:39:11 Download gff for
BO03850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18501835..18502480 | 13..661 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:10:46 Download gff for
BO03850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18395868..18396513 | 13..661 | 99 | | Plus |
BO03850.5prime Sequence
715 bp (675 high quality bases) assembled on 2005-12-01
> BO03850.5prime
GAAGTTATCAGTCGACATGAGTTGCTACAGAAAAAGGCACTTTCTATTGT
GGCTCTTGCGTGCTGTGTGTATGTTGCACTTAACCGCGAGAGGGGCATAT
GCCACAGTTGGGTTGCAAGGAGTGCCGACATGGATATATCTCGGCCTCAA
GTCCCCCTTCATCGAGTTTGGCAACCAGGTGGAGCAGCTGGCCAATTCCA
GCATACCACTGAACATGACCAAGGACGAGCAGGCCAATATGCATCAAGAG
GGCCTACGCAAGCTCGGTACGTTCATAAAGCCAGTGGACCTGCGGGACTC
GGAGACTGGCTTCGTCAAGGCCGATCTCACCAAGAGACTGGTATTCGATA
GACCGAACAACATTACATCTCGCCCTATTCACCCGATACAGGAGGAGATG
GATCAGAAGCAGATAATCCTGCTCGACGAGGATACCGACGAGAATGGCCT
GCCAGCCAGTCTCACCGACGAGGATCGCAAGTTTATAGTGCCGATGGCGC
TCAAGAATATATCGCCCGATCCACGCTGGGCGGCCACTACACCGAGTCCC
TCCGCTTTGCAGCCGAACGCTAAAGCCATCTCGACCATTGTGCCCTCGCC
TCTGGCCCAGGTCGAGGGGGATCCCACGTCCAACATCGATGACCTGAAGA
AGCACATACTCTTCTTGCACAACATGACCAAGACCAATTCGAACTTCGAG
TCGAAATTCGTTAAA
BO03850.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:54:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6407-PA | 3015 | Wnt5-RA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:23:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt5-RB | 4005 | CG6407-RB | 554..1252 | 17..715 | 3495 | 100 | Plus |
| Wnt5-RA | 3850 | CG6407-RA | 554..1252 | 17..715 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:23:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18504154..18504852 | 715..17 | 3495 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 05:23:18 has no hits.
BO03850.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:49:33 Download gff for
BO03850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-PA | 1..696 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-09 23:56:19 Download gff for
BO03850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6407-PA | 1..696 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:52:12 Download gff for
BO03850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 547..1249 | 10..712 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:53:45 Download gff for
BO03850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 547..1249 | 10..712 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:53:45 Download gff for
BO03850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18504157..18504859 | 10..712 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:52:12 Download gff for
BO03850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18398190..18398892 | 10..712 | 99 | | Minus |
BO03850.complete Sequence
3049 bp assembled on 2006-10-10
GenBank Submission: FJ629589
> BO03850.complete
GAAGTTATCAGTCGACATGAGTTGCTACAGAAAAAGGCACTTTCTATTGT
GGCTCTTGCGTGCTGTGTGTATGTTGCACTTAACCGCGAGAGGGGCATAT
GCCACAGTTGGGTTGCAAGGAGTGCCGACATGGATATATCTCGGCCTCAA
GTCCCCCTTCATCGAGTTTGGCAACCAGGTGGAGCAGCTGGCCAATTCCA
GCATACCACTGAACATGACCAAGGACGAGCAGGCCAATATGCATCAAGAG
GGCCTACGCAAGCTCGGTACGTTCATAAAGCCAGTGGACCTGCGGGACTC
GGAGACTGGCTTCGTCAAGGCCGATCTCACCAAGAGACTGGTATTCGATA
GACCGAACAACATTACATCTCGCCCTATTCACCCGATACAGGAGGAGATG
GATCAGAAGCAGATAATCCTGCTCGACGAGGATACCGACGAGAATGGCCT
GCCAGCCAGTCTCACCGACGAGGATCGCAAGTTTATAGTGCCGATGGCGC
TCAAGAATATATCGCCCGATCCACGCTGGGCGGCCACTACACCGAGTCCC
TCCGCTTTGCAGCCGAACGCTAAAGCCATCTCGACCATTGTGCCCTCGCC
TCTGGCCCAGGTCGAGGGGGATCCCACGTCCAACATCGATGACCTGAAGA
AGCACATACTCTTCTTGCACAACATGACCAAGACCAATTCGAACTTCGAG
TCGAAATTCGTTAAATTCCCGAGCCTGCAAAAGGACAAGGCCAAGACATC
GGGAGCTGGCGGTTCGCCGCCCAATCCCAAGCGGCCCCAGCGGCCGATTC
ATCAGTATTCCGCGCCCATAGCCCCACCAACACCCAAGGTGCCCGCGCCA
GATGGCGGCGGCGTAGGAGGAGCAGCTTACAATCCCGGAGAGCAGCCAAT
TGGTGGCTACTATCAGAACGAGGAACTAGCGAATAATCAATCCCTTCTTA
AACCAACAGATACCGACTCCCATCCAGCGGCCGGCGGTAGCAGCCATGGC
CAGAAGAATCCCAGCGAGCCCCAGGTGATACTGCTCAACGAGACACTCTC
CACGGAGACCTCAATCGAAGCGGATCGCAGTCCATCGATAAACCAGCCCA
AGGCGGGATCGCCTGCGCGCACAACAAAGCGACCACCTTGCCTGCGCAAT
CCCGAGTCCCCGAAATGCATACGTCAGCGTCGGCGGGAGGAGCAACAGCG
GCAGCGGGAGCGGGACGAGTGGTTCCGCGGTCAGTCGCAGTACATGCAGC
CCCGGTTCGAGCCGATCATACAGACGATTAACAATACGAAGAGATTTGCC
GTATCAATCGAGATTCCAGACTCCTTTAAAGTATCCTCCGAGGGATCGGA
TGGGGAGTTGCTTTCGCGAGTCGAACGCTCGCAGCCCAGCATTAGTAGTA
GTAGTAGTAGCAGTAGTAGCAGTAGTAGGAAAATCATGCCAGACTATATT
AAGGTATCCATGGAGAACAACACATCCGTCACGGATTATTTTAAGCACGA
CGTTGTGATGACATCGGCAGATGTCGCCAGCGATAGGGAATTCCTTATCA
AGAACATGGAGGAGCACGGAGGCGCTGGCTCCGCGAACAGTCATCACAAT
GATACGACTCCAACTGCAGACGCATATTCGGAGACAATCGATCTTAATCC
CAATAACTGCTATAGCGCAATAGGTCTAAGCAACAGCCAAAAGAAGCAAT
GTGTTAAGCACACCAGCGTGATGCCGGCCATAAGTCGTGGTGCCCGTGCC
GCCATCCAGGAGTGCCAGTTTCAGTTCAAGAATCGCCGCTGGAACTGCAG
CACAACGAACGACGAGACCGTATTTGGTCCCATGACCAGCCTGGCTGCTC
CCGAAATGGCCTTCATCCACGCCCTGGCCGCGGCCACGGTGACCAGCTTC
ATAGCTCGCGCCTGCCGGGATGGCCAACTGGCCTCCTGCAGCTGCTCCCG
CGGCAGTCGACCCAAACAGCTCCACGACGACTGGAAGTGGGGCGGCTGTG
GCGACAACCTGGAGTTCGCCTACAAGTTCGCCACGGACTTCATCGATTCG
CGGGAGAAGGAAACCAATCGCGAGACGCGTGGCGTTAAGAGAAAACGCGA
GGAGATCAACAAGAATCGCATGCATTCCGATGACACGAATGCTTTTAACA
TAGGTATTAAACGTAACAAAAACGTAGATGCTAAAAACGATACAAGTTTG
GTAGTGAGAAACGTTAGGAAAAGCACTGAGGCTGAAAACAGTCACATACT
CAATGAGAACTTTGATCAGCACCTATTGGAACTAGAGCAGCGCATTACGA
AGGAGATACTTACATCCAAGATAGACGAGGAGGAGATGATTAAGCTGCAG
GAGAAGATCAAACAGGAGATTGTCAACACCAAGTTCTTCAAGGGTGAGCA
GCAGCCGCGCAAGAAGAAGCGAAAAAACCAGAGAGCCGCCGCCGATGCGC
CCGCCTATCCGAGGAACGGCATCAAGGAGAGCTACAAGGATGGCGGCATA
TTGCCGCGCAGCACGGCCACTGTCAAGGCCAGGAGCCTGATGAACTTGCA
CAACAACGAGGCCGGACGTCGGGCGGTGATCAAGAAGGCCAGGATAACGT
GCAAGTGCCACGGCGTGTCCGGCTCCTGCAGCCTGATCACCTGCTGGCAG
CAATTGTCCTCCATCCGGGAGATTGGCGACTATCTGCGCGAGAAGTACGA
GGGCGCCACCAAGGTGAAGATCAACAAGCGTGGCCGCCTCCAGATCAAGG
ACTTGCAATTCAAGGTGCCGACCGCTCACGATCTTATTTACCTAGACGAA
AGTCCCGACTGGTGCCGCAATAGCTATGCGCTGCATTGGCCGGGAACGCA
CGGACGTGTGTGCCACAAAAACTCGTCGGGATTGGAGAGCTGTGCCATCC
TCTGCTGCGGCCGGGGCTATAATACGAAGAACATTATAGTTAACGAACGC
TGCAATTGCAAATTTCACTGGTGTTGCCAGGTTAAATGTGAAGTTTGTAC
GAAGGTACTCGAGGAGCACACATGTAAAAAGGCAAGCTTTCTAGACCAT
BO03850.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:13:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt5-RB | 3015 | CG6407-PB | 1..3012 | 17..3028 | 15060 | 100 | Plus |
| Wnt5-RA | 3015 | CG6407-PA | 1..3012 | 17..3028 | 15060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt5-RB | 4005 | CG6407-RB | 554..3565 | 17..3028 | 15060 | 100 | Plus |
| Wnt5-RA | 3850 | CG6407-RA | 554..3565 | 17..3028 | 15060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:13:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18501841..18504852 | 3028..17 | 15060 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:13:55 has no hits.
BO03850.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:48 Download gff for
BO03850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 1..3015 | 17..3031 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:03:33 Download gff for
BO03850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 545..3569 | 10..3037 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:51:16 Download gff for
BO03850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 554..3571 | 17..3033 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:48 Download gff for
BO03850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 545..3569 | 10..3037 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:55:00 Download gff for
BO03850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 554..3571 | 17..3033 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:55:00 Download gff for
BO03850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18501835..18504852 | 17..3033 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:51:16 Download gff for
BO03850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18395868..18398885 | 17..3033 | 99 | | Minus |
BO03850.pep Sequence
Translation from 16 to 3049
> BO03850.pep
MSCYRKRHFLLWLLRAVCMLHLTARGAYATVGLQGVPTWIYLGLKSPFIE
FGNQVEQLANSSIPLNMTKDEQANMHQEGLRKLGTFIKPVDLRDSETGFV
KADLTKRLVFDRPNNITSRPIHPIQEEMDQKQIILLDEDTDENGLPASLT
DEDRKFIVPMALKNISPDPRWAATTPSPSALQPNAKAISTIVPSPLAQVE
GDPTSNIDDLKKHILFLHNMTKTNSNFESKFVKFPSLQKDKAKTSGAGGS
PPNPKRPQRPIHQYSAPIAPPTPKVPAPDGGGVGGAAYNPGEQPIGGYYQ
NEELANNQSLLKPTDTDSHPAAGGSSHGQKNPSEPQVILLNETLSTETSI
EADRSPSINQPKAGSPARTTKRPPCLRNPESPKCIRQRRREEQQRQRERD
EWFRGQSQYMQPRFEPIIQTINNTKRFAVSIEIPDSFKVSSEGSDGELLS
RVERSQPSISSSSSSSSSSSRKIMPDYIKVSMENNTSVTDYFKHDVVMTS
ADVASDREFLIKNMEEHGGAGSANSHHNDTTPTADAYSETIDLNPNNCYS
AIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDE
TVFGPMTSLAAPEMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPK
QLHDDWKWGGCGDNLEFAYKFATDFIDSREKETNRETRGVKRKREEINKN
RMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENSHILNENFD
QHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKK
KRKNQRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAG
RRAVIKKARITCKCHGVSGSCSLITCWQQLSSIREIGDYLREKYEGATKV
KINKRGRLQIKDLQFKVPTAHDLIYLDESPDWCRNSYALHWPGTHGRVCH
KNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTKVLEE
HTCKKASFLDH
BO03850.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt5-PB | 1004 | CG6407-PB | 1..1004 | 1..1004 | 5314 | 100 | Plus |
| Wnt5-PA | 1004 | CG6407-PA | 1..1004 | 1..1004 | 5314 | 100 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 145..325 | 838..1004 | 414 | 44.8 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 172..352 | 838..1004 | 414 | 44.8 | Plus |
| Wnt6-PC | 420 | CG4969-PC | 255..419 | 840..1003 | 352 | 38.2 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 3..147 | 548..687 | 235 | 31.8 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 30..174 | 548..687 | 235 | 31.8 | Plus |
