Clone Sequence Records
BO04016.3prime Sequence
596 bp (595 high quality bases) assembled on 2005-12-01
> BO04016.3prime
ATGGTCTAGAAAGCTTGCCGTAGCAACAGGAGCCGGAGCAGCTCCCTCCG
GTTCGGCAGCCTTTTCTCCGTTGCCGTTCTGCGCCTTGGCTGCCGGCAGA
TCCTTGACTCCGGTGGAACCGAATCCTGCCTCGCCGCGCTCGGTGTCCTC
CAGTTTGTCCACCATCACCAGTTGCGGATAGAAGATACGCTCGCAAATGA
ACTGGGCGATGCGGTCGCCATGCTTCACCTCGAAATCAACATCTGAGTGA
TTGAACAGGACGACGCCGAGATTGCCGCGATAATCCTCGTCCACCACACC
GGCGCCCACATCAATGAAGTTCTTCACCGCCAGCCCGGATCGTGGGGCTA
CGCGTCCGTAGGAGCCCTCCGGAACCTGCACTTGCAGATCGGTCTTGACA
ATGGCCTTTCCGCGTGCCGGCACCACAACGTCGTAGGCGCTGCGCAGGTC
AACTCCCGCCGCTTTGGCGGATCCCCTCACCGGCTCCAAAGCATTCTCGG
TGAGTTTGGCGAATCGCAGGACGCACGTGTCGATCTTCATCTTCTTGGCA
GCTGGAATGTCGGCGAAATCGGTTGATGGCATGTCGACTGATAACT
BO04016.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:56:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4584-PA | 567 | dUTPase-RA | 1..564 | 582..19 | 2820 | 100 | Minus |
CG4584-PB | 525 | dUTPase-RB | 1..522 | 540..19 | 2610 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:12:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-RA | 824 | CG4584-RA | 130..693 | 582..19 | 2820 | 100 | Minus |
dUTPase-RD | 750 | CG4584-RD | 69..619 | 569..19 | 2755 | 100 | Minus |
dUTPase-RB | 732 | CG4584-RB | 69..601 | 551..19 | 2665 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:12:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11011441..11012004 | 582..19 | 2820 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:12:29 has no hits.
BO04016.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:52:36 Download gff for
BO04016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4584-PA | 1..567 | 15..582 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:00:43 Download gff for
BO04016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4584-PA | 1..567 | 15..582 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:24:56 Download gff for
BO04016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 125..696 | 15..587 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:49:36 Download gff for
BO04016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 125..696 | 15..587 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:49:36 Download gff for
BO04016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11011436..11012003 | 20..587 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:24:56 Download gff for
BO04016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11011436..11012003 | 20..587 | 99 | -> | Minus |
BO04016.5prime Sequence
596 bp (595 high quality bases) assembled on 2005-12-01
> BO04016.5prime
GAAGTTATCAGTCGACATGCCATCAACCGATTTCGCCGACATTCCAGCTG
CCAAGAAGATGAAGATCGACACGTGCGTCCTGCGATTCGCCAAACTCACC
GAGAATGCTTTGGAGCCGGTGAGGGGATCCGCCAAAGCGGCGGGAGTTGA
CCTGCGCAGCGCCTACGACGTTGTGGTGCCGGCACGCGGAAAGGCCATTG
TCAAGACCGATCTGCAAGTGCAGGTTCCGGAGGGCTCCTACGGACGCGTA
GCCCCACGATCCGGGCTGGCGGTGAAGAACTTCATTGATGTGGGCGCCGG
TGTGGTGGACGAGGATTATCGCGGCAATCTCGGCGTCGTCCTGTTCAATC
ACTCAGATGTTGATTTCGAGGTGAAGCATGGCGACCGCATCGCCCAGTTC
ATTTGCGAGCGTATCTTCTATCCGCAACTGGTGATGGTGGACAAACTGGA
GGACACCGAGCGCGGCGAGGCAGGATTCGGTTCCACCGGAGTCAAGGATC
TGCCGGCAGCCAAGGCGCAGAACGGCAACGGAGAAAAGGCTGCCGAACCG
GAGGGAGCTGCTCCGGCTCCTGTTGCTACGGCAAGCTTTCTAGACC
BO04016.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 11:57:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4584-PA | 567 | dUTPase-RA | 1..564 | 17..580 | 2820 | 100 | Plus |
CG4584-PB | 525 | dUTPase-RB | 1..522 | 59..580 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:38:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-RA | 824 | CG4584-RA | 130..693 | 17..580 | 2820 | 100 | Plus |
dUTPase-RD | 750 | CG4584-RD | 69..619 | 30..580 | 2755 | 100 | Plus |
dUTPase-RB | 732 | CG4584-RB | 69..601 | 48..580 | 2665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:38:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11011441..11012004 | 17..580 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:38:43 has no hits.
BO04016.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 01:52:37 Download gff for
BO04016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4584-PA | 1..567 | 17..584 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:00:45 Download gff for
BO04016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4584-PA | 1..567 | 17..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:11:19 Download gff for
BO04016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 125..696 | 12..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:08:42 Download gff for
BO04016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 125..696 | 12..584 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:08:42 Download gff for
BO04016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11011436..11012003 | 12..579 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:11:19 Download gff for
BO04016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11011436..11012003 | 12..579 | 99 | -> | Plus |
BO04016.complete Sequence
598 bp (598 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ629600
> BO04016.complete
GAAGTTATCAGTCGACATGCCATCAACCGATTTCGCCGACATTCCAGCTG
CCAAGAAGATGAAGATCGACACGTGCGTCCTGCGATTCGCCAAACTCACC
GAGAATGCTTTGGAGCCGGTGAGGGGATCCGCCAAAGCGGCGGGAGTTGA
CCTGCGCAGCGCCTACGACGTTGTGGTGCCGGCACGCGGAAAGGCCATTG
TCAAGACCGATCTGCAAGTGCAGGTTCCGGAGGGCTCCTACGGACGCGTA
GCCCCACGATCCGGGCTGGCGGTGAAGAACTTCATTGATGTGGGCGCCGG
TGTGGTGGACGAGGATTATCGCGGCAATCTCGGCGTCGTCCTGTTCAATC
ACTCAGATGTTGATTTCGAGGTGAAGCATGGCGACCGCATCGCCCAGTTC
ATTTGCGAGCGTATCTTCTATCCGCAACTGGTGATGGTGGACAAACTGGA
GGACACCGAGCGCGGCGAGGCAGGATTCGGTTCCACCGGAGTCAAGGATC
TGCCGGCAGCCAAGGCGCAGAACGGCAACGGAGAAAAGGCTGCCGAACCG
GAGGGAGCTGCTCCGGCTCCTGTTGCTACGGCAAGCTTTCTAGACCAT
BO04016.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-RA | 567 | CG4584-PA | 1..564 | 17..580 | 2820 | 100 | Plus |
dUTPase-RB | 525 | CG4584-PB | 1..522 | 59..580 | 2610 | 100 | Plus |
dUTPase-RD | 525 | CG4584-PD | 1..522 | 59..580 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-RA | 824 | CG4584-RA | 130..693 | 17..580 | 2820 | 100 | Plus |
dUTPase-RD | 750 | CG4584-RD | 69..619 | 30..580 | 2755 | 100 | Plus |
dUTPase-RB | 732 | CG4584-RB | 69..601 | 48..580 | 2665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11011441..11012004 | 17..580 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:42:39 has no hits.
BO04016.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:33:38 Download gff for
BO04016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 1..567 | 17..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:01:02 Download gff for
BO04016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 102..673 | 12..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:59 Download gff for
BO04016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 130..693 | 17..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:33:38 Download gff for
BO04016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 102..673 | 12..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:37 Download gff for
BO04016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dUTPase-RA | 130..693 | 17..582 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:37 Download gff for
BO04016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11011441..11012004 | 17..582 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:59 Download gff for
BO04016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11011441..11012004 | 17..582 | 99 | | Plus |
BO04016.pep Sequence
Translation from 16 to 598
> BO04016.pep
MPSTDFADIPAAKKMKIDTCVLRFAKLTENALEPVRGSAKAAGVDLRSAY
DVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFIDVGAGVVDED
YRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQLVMVDKLEDTERG
EAGFGSTGVKDLPAAKAQNGNGEKAAEPEGAAPAPVATASFLDH
BO04016.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:35:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dUTPase-PA | 188 | CG4584-PA | 1..188 | 1..188 | 959 | 100 | Plus |
dUTPase-PB | 174 | CG4584-PB | 1..174 | 15..188 | 887 | 100 | Plus |
dUTPase-PD | 174 | CG4584-PD | 1..174 | 15..188 | 887 | 100 | Plus |
dUTPase-PC | 174 | CG4584-PC | 1..174 | 15..188 | 887 | 100 | Plus |